Phillip B Pope

Phillip B Pope

UNVERIFIED PROFILE

Are you Phillip B Pope?   Register this Author

Register author
Phillip B Pope

Phillip B Pope

Publications by authors named "Phillip B Pope"

Are you Phillip B Pope?   Register this Author

40Publications

803Reads

38Profile Views

The Farmed Atlantic Salmon () Skin-Mucus Proteome and Its Nutrient Potential for the Resident Bacterial Community.

Genes (Basel) 2019 07 7;10(7). Epub 2019 Jul 7.

Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), NO-1432 Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3390/genes10070515DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6678340PMC
July 2019

From proteins to polysaccharides: lifestyle and genetic evolution of Coprothermobacter proteolyticus.

ISME J 2019 03 12;13(3):603-617. Epub 2018 Oct 12.

Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Ås, 1432, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41396-018-0290-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6461833PMC
March 2019

Functional metagenomics reveals abundant polysaccharide-degrading gene clusters and cellobiose utilization pathways within gut microbiota of a wood-feeding higher termite.

ISME J 2019 01 16;13(1):104-117. Epub 2018 Aug 16.

Key Laboratory of Insect Developmental and Evolutionary Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41396-018-0255-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6298952PMC
January 2019

Proteomic Dissection of the Cellulolytic Machineries Used by Soil-Dwelling .

mSystems 2018 Nov-Dec;3(6). Epub 2018 Nov 20.

Wallenberg Wood Science Center, Department of Biology and Biotechnology, Chalmers University of Technology, Gothenburg, Sweden.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1128/mSystems.00240-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247017PMC
November 2018

Stable Core Gut Microbiota across the Freshwater-to-Saltwater Transition for Farmed Atlantic Salmon.

Appl Environ Microbiol 2018 01 2;84(2). Epub 2018 Jan 2.

Faculty of Chemistry, Biotechnology and Food Science, University of Life Sciences, Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1128/AEM.01974-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5752857PMC
January 2018

The Skin-Mucus Microbial Community of Farmed Atlantic Salmon ().

Front Microbiol 2017 20;8:2043. Epub 2017 Oct 20.

Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3389/fmicb.2017.02043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655796PMC
October 2017

Outer membrane vesicles from Fibrobacter succinogenes S85 contain an array of carbohydrate-active enzymes with versatile polysaccharide-degrading capacity.

Environ Microbiol 2017 07 29;19(7):2701-2714. Epub 2017 May 29.

Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/1462-2920.13770DOI Listing
July 2017

The Potential of Class II Bacteriocins to Modify Gut Microbiota to Improve Host Health.

PLoS One 2016 3;11(10):e0164036. Epub 2016 Oct 3.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0164036PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5047636PMC
June 2017

Proteomic data on enzyme secretion and activity in the bacterium .

Data Brief 2017 Apr 17;11:484-490. Epub 2017 Feb 17.

Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, 106 91 Stockholm, Sweden; Wallenberg Wood Science Center, Teknikringen 56-58, SE-100 44 Stockholm, Sweden.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.dib.2017.02.032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5344218PMC
April 2017

Metagenomics and CAZyme Discovery.

Methods Mol Biol 2017 ;1588:255-277

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 5003, 1432, Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-4939-6899-2_20DOI Listing
April 2017

Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis.

J Proteomics 2017 03 6;156:63-74. Epub 2017 Jan 6.

Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Centre, 106 91 Stockholm, Sweden; Wallenberg Wood Science Center, Teknikringen 56-58, SE-100 44 Stockholm, Sweden. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jprot.2017.01.003DOI Listing
March 2017

Quantitative Metaproteomics Highlight the Metabolic Contributions of Uncultured Phylotypes in a Thermophilic Anaerobic Digester.

Appl Environ Microbiol 2017 01 30;83(2). Epub 2016 Dec 30.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway.

View Article

Download full-text PDF

Source
http://aem.asm.org/lookup/doi/10.1128/AEM.01955-16
Publisher Site
http://dx.doi.org/10.1128/AEM.01955-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5203625PMC
January 2017

From Genomes to Phenotypes: Traitar, the Microbial Trait Analyzer.

mSystems 2016 Nov-Dec;1(6). Epub 2016 Dec 27.

Computational Biology of Infection Research, Helmholtz Center for Infection Research, Braunschweig, Germany; German Center for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Braunschweig, Germany; Department for Algorithmic Bioinformatics, Heinrich Heine University, Düsseldorf, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1128/mSystems.00101-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5192078PMC
December 2016

A polysaccharide utilization locus from enables conversion of recalcitrant chitin.

Biotechnol Biofuels 2016 28;9:260. Epub 2016 Nov 28.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), 1432 Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s13068-016-0674-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5127042PMC
November 2016

First insight into the faecal microbiota of the high Arctic muskoxen ().

Microb Genom 2016 07 29;2(7):e000066. Epub 2016 Jul 29.

2​Department of Arctic and Marine Biology, UiT - The Arctic University of Norway, Tromsø, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1099/mgen.0.000066DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5343138PMC
July 2016

Characterization of microbial community structure during continuous anaerobic digestion of straw and cow manure.

Microb Biotechnol 2015 Sep 8;8(5):815-27. Epub 2015 Jul 8.

Department of Microbiology, Swedish University of Agricultural Science, Uppsala BioCenter, P.O. Box 7025, SE-750 07, Uppsala, Sweden.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/1751-7915.12298DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4554469PMC
September 2015

The effect of storage conditions on microbial community composition and biomethane potential in a biogas starter culture.

Appl Microbiol Biotechnol 2015 Jul 7;99(13):5749-61. Epub 2015 May 7.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, P. O. Box 5003, 1432, Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00253-015-6623-0DOI Listing
July 2015

Resistant starch diet induces change in the swine microbiome and a predominance of beneficial bacterial populations.

Microbiome 2015 16;3:16. Epub 2015 Apr 16.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Chr. Magnus Falsens Vei 1, P.O. Box 5003, N-1432 Ås Akershus, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s40168-015-0078-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4405844PMC
April 2015

Microbial community structure and dynamics during co-digestion of whey permeate and cow manure in continuous stirred tank reactor systems.

Bioresour Technol 2014 Nov 30;171:350-9. Epub 2014 Aug 30.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, P.O. Box 5003, N-1432 Ås, Norway. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.biortech.2014.08.095DOI Listing
November 2014

Inference of phenotype-defining functional modules of protein families for microbial plant biomass degraders.

Biotechnol Biofuels 2014 9;7(1):124. Epub 2014 Sep 9.

Max-Planck Research Group for Computational Genomics and Epidemiology, Max-Planck Institute for Informatics, University Campus E1 4, Saarbrücken, 66123 Germany ; Department of Algorithmic Bioinformatics, Heinrich Heine University Düsseldorf, Düsseldorf, 40225 Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s13068-014-0124-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4189754PMC
October 2014

Omics-based interpretation of synergism in a soil-derived cellulose-degrading microbial community.

Sci Rep 2014 Jun 13;4:5288. Epub 2014 Jun 13.

1] BGI-Shenzhen, Shenzhen 518083, CHINA [2] Department of Biology, University of Copenhagen, Copenhagen, DENMARK [3] King Abdulaziz University, Jeddah, SAUDI ARABIA [4] Macau University of Science and Technology, Macau, CHINA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/srep05288DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5381534PMC
June 2014

Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes.

J Ind Microbiol Biotechnol 2014 Mar 22;41(3):601-6. Epub 2014 Jan 22.

CSIRO Animal, Food and Health Sciences, Riverside Life Sciences Centre, PO Box 52, North Ryde, NSW, 2113, Australia,

View Article

Download full-text PDF

Source
http://link.springer.com/10.1007/s10295-013-1395-y
Publisher Site
http://dx.doi.org/10.1007/s10295-013-1395-yDOI Listing
March 2014

Potential applications of gut microbiota to control human physiology.

Antonie Van Leeuwenhoek 2013 Nov 23;104(5):609-18. Epub 2013 Aug 23.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, P.O. Box 5003, 1432, Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s10482-013-0008-0DOI Listing
November 2013

Microbial community structure in a biogas digester utilizing the marine energy crop Saccharina latissima.

3 Biotech 2013 Oct 25;3(5):407-414. Epub 2012 Oct 25.

Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Post Office Box 5003, 1432, Ås, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13205-012-0097-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3781269PMC
October 2013

De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes.

Biotechnol Biofuels 2013 Feb 15;6(1):24. Epub 2013 Feb 15.

Max-Planck Research Group for Computational Genomics and Epidemiology, Max-Planck Institute for Informatics, University Campus E1 4, Saarbrücken, 66123, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1754-6834-6-24DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3585893PMC
February 2013

Draft genome sequence of the methane-oxidizing bacterium Methylococcus capsulatus (Texas).

J Bacteriol 2012 Dec;194(23):6626

Department of Chemistry, Biotechnology, and Food Science, Norwegian University of Life Sciences, Aas, Norway.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1128/JB.01656-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3497533PMC
December 2012

Muramidases found in the foregut microbiome of the Tammar wallaby can direct cell aggregation and biofilm formation.

ISME J 2011 Feb 29;5(2):341-50. Epub 2010 Jul 29.

CSIRO Livestock Industries, Queensland Bioscience Precinct, St Lucia, Queensland, Australia.

View Article

Download full-text PDF

Source
http://www.nature.com/articles/ismej2010116
Publisher Site
http://dx.doi.org/10.1038/ismej.2010.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105685PMC
February 2011

High-yield and phylogenetically robust methods of DNA recovery for analysis of microbial biofilms adherent to plant biomass in the herbivore gut.

Microb Ecol 2011 Feb 14;61(2):448-54. Epub 2010 Sep 14.

Commonwealth Scientific and Industrial Research Organisation, Division of Livestock Industries, Queensland Bioscience Precinct, 306 Carmody Road, St Lucia, QLD 4067, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00248-010-9745-zDOI Listing
February 2011

Plant biomass degradation by gut microbiomes: more of the same or something new?

Curr Opin Biotechnol 2009 Jun 8;20(3):358-63. Epub 2009 Jun 8.

Commonwealth Scientific and Industrial Research Organization (CSIRO) Australia, 306 Carmody Road, Queensland Bioscience Precinct, St Lucia, Queensland 4068, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.copbio.2009.05.004DOI Listing
June 2009

Metagenomic analysis of a freshwater toxic cyanobacteria bloom.

FEMS Microbiol Ecol 2008 Apr 4;64(1):9-27. Epub 2008 Mar 4.

Microbial Gene Research and Resources Facility, School of Biomolecular and Physical Sciences, Griffith University, Nathan, Brisbane, Qld, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1574-6941.2008.00448.xDOI Listing
April 2008