Philip Toukach

Philip Toukach

UNVERIFIED PROFILE

Are you Philip Toukach?   Register this Author

Register author
Philip Toukach

Philip Toukach

Publications by authors named "Philip Toukach"

Are you Philip Toukach?   Register this Author

27Publications

465Reads

20Profile Views

New Features of Carbohydrate Structure Database Notation (CSDB Linear), As Compared to Other Carbohydrate Notations.

J Chem Inf Model 2020 Jan 16. Epub 2020 Jan 16.

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences , Leninsky prosect 47 , Moscow , Russia 119991.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.jcim.9b00744DOI Listing
January 2020

Updates to the Symbol Nomenclature for Glycans guidelines.

Glycobiology 2019 08;29(9):620-624

Complex Carbohydrate Research Center, University of Georgia, 315 Riverbend Rd, Athens, GA, 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/glycob/cwz045DOI Listing
August 2019

Structure elucidation and gene cluster characterization of the O-antigen of Yersinia kristensenii С-134.

Carbohydr Res 2019 Jul 6;481:9-15. Epub 2019 Jun 6.

State Research Center for Applied Microbiology and Biotechnology, 142279, Obolensk, Moscow Region, Russian Federation. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.carres.2019.06.001DOI Listing
July 2019

Expanding CSDB_GT glycosyltransferase database with Escherichia coli.

Glycobiology 2019 04;29(4):285-287

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/glycob/cwz006DOI Listing
April 2019

SugarSketcher: Quick and Intuitive Online Glycan Drawing.

Molecules 2018 Dec 5;23(12). Epub 2018 Dec 5.

Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, 1211 Geneva, Switzerland.

View Article

Download full-text PDF

Source
http://www.mdpi.com/1420-3049/23/12/3206
Publisher Site
http://dx.doi.org/10.3390/molecules23123206DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6320881PMC
December 2018

Glycoinformatics: Bridging Isolated Islands in the Sea of Data.

Angew Chem Int Ed Engl 2018 11 11;57(46):14986-14990. Epub 2018 Oct 11.

Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, Moscow, 119991, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/anie.201803576DOI Listing
November 2018

REStLESS: automated translation of glycan sequences from residue-based notation to SMILES and atomic coordinates.

Bioinformatics 2018 08;34(15):2679-2681

Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Laboratory of Complex and Nano-scaled Catalysts, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/bty168DOI Listing
August 2018

GRASS: semi-automated NMR-based structure elucidation of saccharides.

Bioinformatics 2018 03;34(6):957-963

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 119991 Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btx696DOI Listing
March 2018

CSDB_GT: a new curated database on glycosyltransferases.

Glycobiology 2017 04 23;27(4):285-290. Epub 2016 Dec 23.

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky prospect 47, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/glycob/cww137DOI Listing
April 2017

Simulation of 2D NMR Spectra of Carbohydrates Using GODESS Software.

J Chem Inf Model 2016 06 6;56(6):1100-4. Epub 2016 Jun 6.

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences , Leninsky prosp. 47, Moscow 119991, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.jcim.6b00083DOI Listing
June 2016

Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts.

Nucleic Acids Res 2016 Jan 18;44(D1):D1229-36. Epub 2015 Aug 18.

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow 119991, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkv840DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702937PMC
January 2016

Bacterial, plant, and fungal carbohydrate structure databases: daily usage.

Methods Mol Biol 2015 ;1273:55-85

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospekt 47, Moscow, 119991, Russia,

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-4939-2343-4_5DOI Listing
November 2015

Improved Carbohydrate Structure Generalization Scheme for (1)H and (13)C NMR Simulations.

Anal Chem 2015 Jul 13;87(14):7006-10. Epub 2015 Jul 13.

‡N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky prosp. 47, Moscow 119991, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.analchem.5b01413DOI Listing
July 2015

GlycoRDF: an ontology to standardize glycomics data in RDF.

Bioinformatics 2015 Mar 11;31(6):919-25. Epub 2014 Nov 11.

Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA, Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan, Faculty of Engineering, Soka University, Tokyo, Japan, Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia, Database Center for Life Science, Research Organization of Information and Systems, Chiba, Japan, Institute of Veterinary Physiology and Biochemistry, Justus-Liebig-University Giessen, Giessen, Germany, Graduate School of Medical and Dental Sciences, Niigata University, Niigata, Japan, N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia and Laboratory of Glyco-organic Chemistry, The Noguchi Institute, Tokyo, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btu732DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4380026PMC
March 2015

Structural studies of arabinan-rich pectic polysaccharides from Abies sibirica L. Biological activity of pectins of A. sibirica.

Carbohydr Polym 2014 Nov 29;113:515-24. Epub 2014 Jul 29.

Institute of Chemistry, Komi Science Centre, The Urals Branch of the Russian Academy of Sciences, Pervomaiskaya str., 48, Syktyvkar 167982, Russia. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.carbpol.2014.07.037DOI Listing
November 2014

Carbohydrate structure generalization scheme for database-driven simulation of experimental observables, such as NMR chemical shifts.

J Chem Inf Model 2014 Sep 2;54(9):2594-611. Epub 2014 Sep 2.

Higher Chemical College of the Russian Academy of Sciences , Miusskaya sq. 9, Moscow 125047, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ci500267uDOI Listing
September 2014

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.

J Biomed Semantics 2014 Feb 5;5(1). Epub 2014 Feb 5.

Database Center for Life Science, Research Organization of Information and Systems, 2-11-16, Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/2041-1480-5-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978116PMC
February 2014

Structural characteristics of water-soluble polysaccharides from Heracleum sosnowskyi Manden.

Carbohydr Polym 2014 Feb 8;102:521-8. Epub 2013 Dec 8.

Institute of Chemistry, Komi Science Centre, The Urals Branch of the Russian Academy of Sciences, Pervomaiskaya Street 49, Syktyvkar 167982, Russia. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.carbpol.2013.12.001DOI Listing
February 2014

Introducing glycomics data into the Semantic Web.

J Biomed Semantics 2013 Nov 26;4(1):39. Epub 2013 Nov 26.

Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology, Tsukuba Central-2, Umezono 1-1-1, Tsukuba 305-8568, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/2041-1480-4-39DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177142PMC
November 2013

Bacterial carbohydrate structure database 3: principles and realization.

Authors:
Philip V Toukach

J Chem Inf Model 2011 Jan 14;51(1):159-70. Epub 2010 Dec 14.

ND Zelinsky Institute of Organic Chemistry, Leninsky prospekt 47, 119991 Moscow, Russian Federation.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ci100150dDOI Listing
January 2011

Structure of an abequose-containing O-polysaccharide from Citrobacter freundii O22 strain PCM 1555.

Carbohydr Res 2009 Sep 6;344(13):1724-8. Epub 2009 Jun 6.

L. Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114 Wrocław, Poland.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.carres.2009.06.005DOI Listing
September 2009

Structure of a phosphoethanolamine-containing O-polysaccharide of Citrobacter freundii strain PCM 1443 from serogroup O39 and its relatedness to the Klebsiella pneumoniae O1 polysaccharide.

FEMS Immunol Med Microbiol 2008 Jun 26;53(1):60-4. Epub 2008 Mar 26.

L Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla, Wrocław, Poland.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1574-695X.2008.00396.xDOI Listing
June 2008

Sharing of worldwide distributed carbohydrate-related digital resources: online connection of the Bacterial Carbohydrate Structure DataBase and GLYCOSCIENCES.de.

Nucleic Acids Res 2007 Jan;35(Database issue):D280-6

N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 119991 Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkl883DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1899093PMC
January 2007

Structure of the O-specific polysaccharide of Proteus penneri 103 containing ribitol and 2-aminoethanol phosphates.

Carbohydr Res 2002 Sep;337(17):1535-40

Department of General Microbiology, Institute of Microbiology and Immunology, University of Łodz, 90-237 Łodz, Poland.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/s0008-6215(02)00265-3DOI Listing
September 2002