Publications by authors named "Peter de Knijff"

100Publications

Generation and genetic repair of 2 iPSC clones from a patient bearing a heterozygous c.1120del18 mutation in the ACVRL1 gene leading to Hereditary Hemorrhagic Telangiectasia (HHT) type 2.

Stem Cell Res 2020 07 28;46:101786. Epub 2020 May 28.

LUMC hiPSC Hotel, Leiden University Medical Center, Leiden, 2333 ZC, The Netherlands; Department of Anatomy and Embryology, Leiden University Medical Center, Leiden, 2333 ZC, The Netherlands.

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http://dx.doi.org/10.1016/j.scr.2020.101786DOI Listing
July 2020

Taxonomic classification and abundance estimation using 16S and WGS-A comparison using controlled reference samples.

Forensic Sci Int Genet 2020 05 5;46:102257. Epub 2020 Feb 5.

Department of Human Genetics, Leiden University Medical Center, Leiden, the Netherlands; Department of Clinical Genetics, Leiden University Medical Center, Leiden, the Netherlands.

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http://dx.doi.org/10.1016/j.fsigen.2020.102257DOI Listing
May 2020

Deciduous Teeth as an Alternative DNA Source for Postmortem Genetic Testing.

Circ Genom Precis Med 2020 04 31;13(2):e002674. Epub 2020 Jan 31.

Department of Genetics, University Medical Center Groningen, University of Groningen, the Netherlands (W.P.t.R., H.H.L., S.Z.J., Y.M.H.).

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http://dx.doi.org/10.1161/CIRCGEN.119.002674DOI Listing
April 2020

Correction to: The Dutch Y-chromosomal landscape.

Eur J Hum Genet 2020 Mar;28(3):399

Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands.

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http://dx.doi.org/10.1038/s41431-019-0528-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7028942PMC
March 2020

The Dutch Y-chromosomal landscape.

Eur J Hum Genet 2020 03 5;28(3):287-299. Epub 2019 Sep 5.

Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands.

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http://www.nature.com/articles/s41431-019-0496-0
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http://dx.doi.org/10.1038/s41431-019-0496-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7029002PMC
March 2020

Forensic Y-SNP analysis beyond SNaPshot: High-resolution Y-chromosomal haplogrouping from low quality and quantity DNA using Ion AmpliSeq and targeted massively parallel sequencing.

Forensic Sci Int Genet 2019 07 27;41:93-106. Epub 2019 Apr 27.

Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Wytemaweg 80, 3000 CA, Rotterdam, the Netherlands. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S18724973193002
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http://dx.doi.org/10.1016/j.fsigen.2019.04.001DOI Listing
July 2019

From next generation sequencing to now generation sequencing in forensics.

Authors:
Peter de Knijff

Forensic Sci Int Genet 2019 01 3;38:175-180. Epub 2018 Nov 3.

Department of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2018.10.017DOI Listing
January 2019

Short hypervariable microhaplotypes: A novel set of very short high discriminating power loci without stutter artefacts.

Forensic Sci Int Genet 2018 07 22;35:169-175. Epub 2018 May 22.

Department of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333, ZC, Leiden, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2018.05.008DOI Listing
July 2018

Erratum: The Beaker phenomenon and the genomic transformation of northwest Europe.

Authors:
Iñigo Olalde Selina Brace Morten E Allentoft Ian Armit Kristian Kristiansen Thomas Booth Nadin Rohland Swapan Mallick Anna Szécsényi-Nagy Alissa Mittnik Eveline Altena Mark Lipson Iosif Lazaridis Thomas K Harper Nick Patterson Nasreen Broomandkhoshbacht Yoan Diekmann Zuzana Faltyskova Daniel Fernandes Matthew Ferry Eadaoin Harney Peter de Knijff Megan Michel Jonas Oppenheimer Kristin Stewardson Alistair Barclay Kurt Werner Alt Corina Liesau Patricia Ríos Concepción Blasco Jorge Vega Miguel Roberto Menduiña García Azucena Avilés Fernández Eszter Bánffy Maria Bernabò-Brea David Billoin Clive Bonsall Laura Bonsall Tim Allen Lindsey Büster Sophie Carver Laura Castells Navarro Oliver E Craig Gordon T Cook Barry Cunliffe Anthony Denaire Kirsten Egging Dinwiddy Natasha Dodwell Michal Ernée Christopher Evans Milan Kuchařík Joan Francès Farré Chris Fowler Michiel Gazenbeek Rafael Garrido Pena María Haber-Uriarte Elżbieta Haduch Gill Hey Nick Jowett Timothy Knowles Ken Massy Saskia Pfrengle Philippe Lefranc Olivier Lemercier Arnaud Lefebvre César Heras Martínez Virginia Galera Olmo Ana Bastida Ramírez Joaquín Lomba Maurandi Tona Majó Jacqueline I McKinley Kathleen McSweeney Balázs Gusztáv Mende Alessandra Modi Gabriella Kulcsár Viktória Kiss András Czene Róbert Patay Anna Endrődi Kitti Köhler Tamás Hajdu Tamás Szeniczey János Dani Zsolt Bernert Maya Hoole Olivia Cheronet Denise Keating Petr Velemínský Miroslav Dobeš Francesca Candilio Fraser Brown Raúl Flores Fernández Ana-Mercedes Herrero-Corral Sebastiano Tusa Emiliano Carnieri Luigi Lentini Antonella Valenti Alessandro Zanini Clive Waddington Germán Delibes Elisa Guerra-Doce Benjamin Neil Marcus Brittain Mike Luke Richard Mortimer Jocelyne Desideri Marie Besse Günter Brücken Mirosław Furmanek Agata Hałuszko Maksym Mackiewicz Artur Rapiński Stephany Leach Ignacio Soriano Katina T Lillios João Luís Cardoso Michael Parker Pearson Piotr Włodarczak T Douglas Price Pilar Prieto Pierre-Jérôme Rey Roberto Risch Manuel A Rojo Guerra Aurore Schmitt Joël Serralongue Ana Maria Silva Václav Smrčka Luc Vergnaud João Zilhão David Caramelli Thomas Higham Mark G Thomas Douglas J Kennett Harry Fokkens Volker Heyd Alison Sheridan Karl-Göran Sjögren Philipp W Stockhammer Johannes Krause Ron Pinhasi Wolfgang Haak Ian Barnes Carles Lalueza-Fox David Reich

Nature 2018 03;555(7697):543

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http://dx.doi.org/10.1038/nature26164DOI Listing
March 2018

The Beaker phenomenon and the genomic transformation of northwest Europe.

Authors:
Iñigo Olalde Selina Brace Morten E Allentoft Ian Armit Kristian Kristiansen Thomas Booth Nadin Rohland Swapan Mallick Anna Szécsényi-Nagy Alissa Mittnik Eveline Altena Mark Lipson Iosif Lazaridis Thomas K Harper Nick Patterson Nasreen Broomandkhoshbacht Yoan Diekmann Zuzana Faltyskova Daniel Fernandes Matthew Ferry Eadaoin Harney Peter de Knijff Megan Michel Jonas Oppenheimer Kristin Stewardson Alistair Barclay Kurt Werner Alt Corina Liesau Patricia Ríos Concepción Blasco Jorge Vega Miguel Roberto Menduiña García Azucena Avilés Fernández Eszter Bánffy Maria Bernabò-Brea David Billoin Clive Bonsall Laura Bonsall Tim Allen Lindsey Büster Sophie Carver Laura Castells Navarro Oliver E Craig Gordon T Cook Barry Cunliffe Anthony Denaire Kirsten Egging Dinwiddy Natasha Dodwell Michal Ernée Christopher Evans Milan Kuchařík Joan Francès Farré Chris Fowler Michiel Gazenbeek Rafael Garrido Pena María Haber-Uriarte Elżbieta Haduch Gill Hey Nick Jowett Timothy Knowles Ken Massy Saskia Pfrengle Philippe Lefranc Olivier Lemercier Arnaud Lefebvre César Heras Martínez Virginia Galera Olmo Ana Bastida Ramírez Joaquín Lomba Maurandi Tona Majó Jacqueline I McKinley Kathleen McSweeney Balázs Gusztáv Mende Alessandra Modi Gabriella Kulcsár Viktória Kiss András Czene Róbert Patay Anna Endrődi Kitti Köhler Tamás Hajdu Tamás Szeniczey János Dani Zsolt Bernert Maya Hoole Olivia Cheronet Denise Keating Petr Velemínský Miroslav Dobeš Francesca Candilio Fraser Brown Raúl Flores Fernández Ana-Mercedes Herrero-Corral Sebastiano Tusa Emiliano Carnieri Luigi Lentini Antonella Valenti Alessandro Zanini Clive Waddington Germán Delibes Elisa Guerra-Doce Benjamin Neil Marcus Brittain Mike Luke Richard Mortimer Jocelyne Desideri Marie Besse Günter Brücken Mirosław Furmanek Agata Hałuszko Maksym Mackiewicz Artur Rapiński Stephany Leach Ignacio Soriano Katina T Lillios João Luís Cardoso Michael Parker Pearson Piotr Włodarczak T Douglas Price Pilar Prieto Pierre-Jérôme Rey Roberto Risch Manuel A Rojo Guerra Aurore Schmitt Joël Serralongue Ana Maria Silva Václav Smrčka Luc Vergnaud João Zilhão David Caramelli Thomas Higham Mark G Thomas Douglas J Kennett Harry Fokkens Volker Heyd Alison Sheridan Karl-Göran Sjögren Philipp W Stockhammer Johannes Krause Ron Pinhasi Wolfgang Haak Ian Barnes Carles Lalueza-Fox David Reich

Nature 2018 03 21;555(7695):190-196. Epub 2018 Feb 21.

Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1038/nature25738DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5973796PMC
March 2018

FDSTools: A software package for analysis of massively parallel sequencing data with the ability to recognise and correct STR stutter and other PCR or sequencing noise.

Forensic Sci Int Genet 2017 03 27;27:27-40. Epub 2016 Nov 27.

Department of Human Genetics, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2016.11.007DOI Listing
March 2017

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.

Nature 2016 Oct 21;538(7624):201-206. Epub 2016 Sep 21.

Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1038/nature18964DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5161557PMC
October 2016

Massively parallel sequencing of short tandem repeats-Population data and mixture analysis results for the PowerSeq™ system.

Forensic Sci Int Genet 2016 09 7;24:86-96. Epub 2016 Jun 7.

Forensic Laboratory for DNA Research, Department of Human Genetics, Leiden University Medical Centre, Postzone S 05 P, P.O. Box 9600, 2300 RC Leiden, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2016.05.016DOI Listing
September 2016

High-quality mtDNA control region sequences from 680 individuals sampled across the Netherlands to establish a national forensic mtDNA reference database.

Forensic Sci Int Genet 2016 Mar 10;21:158-67. Epub 2015 Dec 10.

Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2015.12.002DOI Listing
March 2016

Analysis of 36 Y-STR marker units including a concordance study among 2085 Dutch males.

Forensic Sci Int Genet 2015 Jan 23;14:174-81. Epub 2014 Oct 23.

Forensic Laboratory for DNA Research, Department of Human Genetics, Leiden University Medical Center, Postzone S-05-P, P.O. Box 9600, 2300 RC Leiden, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2014.10.012DOI Listing
January 2015

De novo transcriptome of Ischnura elegans provides insights into sensory biology, colour and vision genes.

BMC Genomics 2014 Sep 22;15:808. Epub 2014 Sep 22.

Department of Biology, Lund University, Sölvegatan 37, SE-22362 Lund, Sweden.

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http://dx.doi.org/10.1186/1471-2164-15-808DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4182773PMC
September 2014

Genetics. How carrion and hooded crows defeat Linnaeus's curse.

Authors:
Peter de Knijff

Science 2014 Jun;344(6190):1345-6

Department of Human Genetics, Leiden University Medical Center, Post Office Box 9600, 2300 RC Leiden, Netherlands.

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http://dx.doi.org/10.1126/science.1255744DOI Listing
June 2014

Toward male individualization with rapidly mutating y-chromosomal short tandem repeats.

Authors:
Kaye N Ballantyne Arwin Ralf Rachid Aboukhalid Niaz M Achakzai Maria J Anjos Qasim Ayub Jože Balažic Jack Ballantyne David J Ballard Burkhard Berger Cecilia Bobillo Mehdi Bouabdellah Helen Burri Tomas Capal Stefano Caratti Jorge Cárdenas François Cartault Elizeu F Carvalho Monica Carvalho Baowen Cheng Michael D Coble David Comas Daniel Corach Maria E D'Amato Sean Davison Peter de Knijff Maria Corazon A De Ungria Ronny Decorte Tadeusz Dobosz Berit M Dupuy Samir Elmrghni Mateusz Gliwiński Sara C Gomes Laurens Grol Cordula Haas Erin Hanson Jürgen Henke Lotte Henke Fabiola Herrera-Rodríguez Carolyn R Hill Gunilla Holmlund Katsuya Honda Uta-Dorothee Immel Shota Inokuchi Mark A Jobling Mahmoud Kaddura Jong S Kim Soon H Kim Wook Kim Turi E King Eva Klausriegler Daniel Kling Lejla Kovačević Leda Kovatsi Paweł Krajewski Sergey Kravchenko Maarten H D Larmuseau Eun Young Lee Ruediger Lessig Ludmila A Livshits Damir Marjanović Marek Minarik Natsuko Mizuno Helena Moreira Niels Morling Meeta Mukherjee Patrick Munier Javaregowda Nagaraju Franz Neuhuber Shengjie Nie Premlaphat Nilasitsataporn Takeki Nishi Hye H Oh Jill Olofsson Valerio Onofri Jukka U Palo Horolma Pamjav Walther Parson Michal Petlach Christopher Phillips Rafal Ploski Samayamantri P R Prasad Dragan Primorac Gludhug A Purnomo Josephine Purps Hector Rangel-Villalobos Krzysztof Rębała Budsaba Rerkamnuaychoke Danel Rey Gonzalez Carlo Robino Lutz Roewer Alexandra Rosa Antti Sajantila Andrea Sala Jazelyn M Salvador Paula Sanz Cornelia Schmitt Anil K Sharma Dayse A Silva Kyoung-Jin Shin Titia Sijen Miriam Sirker Daniela Siváková Vedrana Skaro Carlos Solano-Matamoros Luis Souto Vlastimil Stenzl Herawati Sudoyo Denise Syndercombe-Court Adriano Tagliabracci Duncan Taylor Andreas Tillmar Iosif S Tsybovsky Chris Tyler-Smith Kristiaan J van der Gaag Daniel Vanek Antónia Völgyi Denise Ward Patricia Willemse Eric P H Yap Rita Y Y Yong Irena Zupanič Pajnič Manfred Kayser

Hum Mutat 2014 Aug 14;35(8):1021-32. Epub 2014 Jul 14.

Department of Forensic Molecular Biology, Erasmus MC University Medical Centre Rotterdam, Rotterdam, The Netherlands; Office of the Chief Forensic Scientist, Victoria Police Forensic Services Department, Macleod, Victoria, Australia.

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http://dx.doi.org/10.1002/humu.22599DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4145662PMC
August 2014

A global analysis of Y-chromosomal haplotype diversity for 23 STR loci.

Authors:
Josephine Purps Sabine Siegert Sascha Willuweit Marion Nagy Cíntia Alves Renato Salazar Sheila M T Angustia Lorna H Santos Katja Anslinger Birgit Bayer Qasim Ayub Wei Wei Yali Xue Chris Tyler-Smith Miriam Baeta Bafalluy Begoña Martínez-Jarreta Balazs Egyed Beate Balitzki Sibylle Tschumi David Ballard Denise Syndercombe Court Xinia Barrantes Gerhard Bäßler Tina Wiest Burkhard Berger Harald Niederstätter Walther Parson Carey Davis Bruce Budowle Helen Burri Urs Borer Christoph Koller Elizeu F Carvalho Patricia M Domingues Wafaa Takash Chamoun Michael D Coble Carolyn R Hill Daniel Corach Mariela Caputo Maria E D'Amato Sean Davison Ronny Decorte Maarten H D Larmuseau Claudio Ottoni Olga Rickards Di Lu Chengtao Jiang Tadeusz Dobosz Anna Jonkisz William E Frank Ivana Furac Christian Gehrig Vincent Castella Branka Grskovic Cordula Haas Jana Wobst Gavrilo Hadzic Katja Drobnic Katsuya Honda Yiping Hou Di Zhou Yan Li Shengping Hu Shenglan Chen Uta-Dorothee Immel Rüdiger Lessig Zlatko Jakovski Tanja Ilievska Anja E Klann Cristina Cano García Peter de Knijff Thirsa Kraaijenbrink Aikaterini Kondili Penelope Miniati Maria Vouropoulou Lejla Kovacevic Damir Marjanovic Iris Lindner Issam Mansour Mouayyad Al-Azem Ansar El Andari Miguel Marino Sandra Furfuro Laura Locarno Pablo Martín Gracia M Luque Antonio Alonso Luís Souto Miranda Helena Moreira Natsuko Mizuno Yasuki Iwashima Rodrigo S Moura Neto Tatiana L S Nogueira Rosane Silva Marina Nastainczyk-Wulf Jeanett Edelmann Michael Kohl Shengjie Nie Xianping Wang Baowen Cheng Carolina Núñez Marian Martínez de Pancorbo Jill K Olofsson Niels Morling Valerio Onofri Adriano Tagliabracci Horolma Pamjav Antonia Volgyi Gusztav Barany Ryszard Pawlowski Agnieszka Maciejewska Susi Pelotti Witold Pepinski Monica Abreu-Glowacka Christopher Phillips Jorge Cárdenas Danel Rey-Gonzalez Antonio Salas Francesca Brisighelli Cristian Capelli Ulises Toscanini Andrea Piccinini Marilidia Piglionica Stefania L Baldassarra Rafal Ploski Magdalena Konarzewska Emila Jastrzebska Carlo Robino Antti Sajantila Jukka U Palo Evelyn Guevara Jazelyn Salvador Maria Corazon De Ungria Jae Joseph Russell Rodriguez Ulrike Schmidt Nicola Schlauderer Pekka Saukko Peter M Schneider Miriam Sirker Kyoung-Jin Shin Yu Na Oh Iulia Skitsa Alexandra Ampati Tobi-Gail Smith Lina Solis de Calvit Vlastimil Stenzl Thomas Capal Andreas Tillmar Helena Nilsson Stefania Turrina Domenico De Leo Andrea Verzeletti Venusia Cortellini Jon H Wetton Gareth M Gwynne Mark A Jobling Martin R Whittle Denilce R Sumita Paulina Wolańska-Nowak Rita Y Y Yong Michael Krawczak Michael Nothnagel Lutz Roewer

Forensic Sci Int Genet 2014 Sep 28;12:12-23. Epub 2014 Apr 28.

Department of Forensic Genetics, Institute of Legal Medicine and Forensic Sciences, Charité-Universitätsmedizin, Berlin, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2014.04.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4127773PMC
September 2014

Comparing six commercial autosomal STR kits in a large Dutch population sample.

Forensic Sci Int Genet 2014 May 4;10:55-63. Epub 2014 Feb 4.

Forensic Laboratory for DNA Research, Department of Human Genetics, Leiden University Medical Centre, Postzone S-05-P, P.O. Box 9600, 2300 RC Leiden, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2014.01.008DOI Listing
May 2014

Developmental validation of mitochondrial DNA genotyping assays for adept matrilineal inference of biogeographic ancestry at a continental level.

Forensic Sci Int Genet 2014 Jul 23;11:39-51. Epub 2014 Feb 23.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center, Dr. Molewaterplein 50, 3015 GE Rotterdam, Zuid-Holland, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2014.02.010DOI Listing
July 2014

Gene conversion violates the stepwise mutation model for microsatellites in y-chromosomal palindromic repeats.

Hum Mutat 2014 May;35(5):609-17

UMR5288 CNRS/UPS-AMIS-Université Paul Sabatier, Toulouse, France; Department of Genetics, University of Leicester, Leicester, UK.

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http://dx.doi.org/10.1002/humu.22542DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4233959PMC
May 2014

Recent radiation within Y-chromosomal haplogroup R-M269 resulted in high Y-STR haplotype resemblance.

Ann Hum Genet 2014 Mar;78(2):92-103

Laboratory of Forensic Genetics and Molecular Archaeology, UZ Leuven, Leuven, Belgium; Department of Imaging & Pathology, Biomedical Forensic Sciences, KU Leuven, Leuven, Belgium; Laboratory of Biodiversity and Evolutionary Genomics, Department of Biology, KU Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1111/ahg.12050DOI Listing
March 2014

TSSV: a tool for characterization of complex allelic variants in pure and mixed genomes.

Bioinformatics 2014 Jun 13;30(12):1651-9. Epub 2014 Feb 13.

Department of Human Genetic, Leiden Genome Technology Center, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands and Netherlands Bioinformatics Centre, Leiden, The NetherlandsDepartment of Human Genetic, Leiden Genome Technology Center, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands and Netherlands Bioinformatics Centre, Leiden, The NetherlandsDepartment of Human Genetic, Leiden Genome Technology Center, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands and Netherlands Bioinformatics Centre, Leiden, The Netherlands.

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http://bioinformatics.oxfordjournals.org/content/early/2014/
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http://bioinformatics.oxfordjournals.org/cgi/doi/10.1093/bio
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http://dx.doi.org/10.1093/bioinformatics/btu068DOI Listing
June 2014

Developmental validation of the HIrisPlex system: DNA-based eye and hair colour prediction for forensic and anthropological usage.

Forensic Sci Int Genet 2014 Mar 27;9:150-61. Epub 2013 Dec 27.

Department of Forensic Molecular Biology, Erasmus MC University Medical Centre Rotterdam, Rotterdam, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2013.12.006DOI Listing
March 2014

Quality assessment of the genetic test for familial hypercholesterolemia in the Netherlands.

Cholesterol 2013 8;2013:531658. Epub 2013 Jul 8.

Foundation for the Identification of Persons with Inherited Hypercholesterolemia (StOEH), Amsterdam, The Netherlands.

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http://dx.doi.org/10.1155/2013/531658DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3722838PMC
August 2013

Secretory phospholipase A(2)-IIA and cardiovascular disease: a mendelian randomization study.

Authors:
Michael V Holmes Tabassome Simon Holly J Exeter Lasse Folkersen Folkert W Asselbergs Montse Guardiola Jackie A Cooper Jutta Palmen Jaroslav A Hubacek Kathryn F Carruthers Benjamin D Horne Kimberly D Brunisholz Jessica L Mega Erik P A van Iperen Mingyao Li Maarten Leusink Stella Trompet Jeffrey J W Verschuren G Kees Hovingh Abbas Dehghan Christopher P Nelson Salma Kotti Nicolas Danchin Markus Scholz Christiane L Haase Dietrich Rothenbacher Daniel I Swerdlow Karoline B Kuchenbaecker Eleonora Staines-Urias Anuj Goel Ferdinand van 't Hooft Karl Gertow Ulf de Faire Andrie G Panayiotou Elena Tremoli Damiano Baldassarre Fabrizio Veglia Lesca M Holdt Frank Beutner Ron T Gansevoort Gerjan J Navis Irene Mateo Leach Lutz P Breitling Hermann Brenner Joachim Thiery Dhayana Dallmeier Anders Franco-Cereceda Jolanda M A Boer Jeffrey W Stephens Marten H Hofker Alain Tedgui Albert Hofman André G Uitterlinden Vera Adamkova Jan Pitha N Charlotte Onland-Moret Maarten J Cramer Hendrik M Nathoe Wilko Spiering Olaf H Klungel Meena Kumari Peter H Whincup David A Morrow Peter S Braund Alistair S Hall Anders G Olsson Pieter A Doevendans Mieke D Trip Martin D Tobin Anders Hamsten Hugh Watkins Wolfgang Koenig Andrew N Nicolaides Daniel Teupser Ian N M Day John F Carlquist Tom R Gaunt Ian Ford Naveed Sattar Sotirios Tsimikas Gregory G Schwartz Debbie A Lawlor Richard W Morris Manjinder S Sandhu Rudolf Poledne Anke H Maitland-van der Zee Kay-Tee Khaw Brendan J Keating Pim van der Harst Jackie F Price Shamir R Mehta Salim Yusuf Jaqueline C M Witteman Oscar H Franco J Wouter Jukema Peter de Knijff Anne Tybjaerg-Hansen Daniel J Rader Martin Farrall Nilesh J Samani Mika Kivimaki Keith A A Fox Steve E Humphries Jeffrey L Anderson S Matthijs Boekholdt Tom M Palmer Per Eriksson Guillaume Paré Aroon D Hingorani Marc S Sabatine Ziad Mallat Juan P Casas Philippa J Talmud

J Am Coll Cardiol 2013 Nov 31;62(21):1966-1976. Epub 2013 Jul 31.

Centre for Cardiovascular Genetics, Institute of Cardiovascular Science, University College London, London, United Kingdom.

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http://dx.doi.org/10.1016/j.jacc.2013.06.044DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3826105PMC
November 2013

Variations in predicted risks in personal genome testing for common complex diseases.

Genet Med 2014 Jan 27;16(1):85-91. Epub 2013 Jun 27.

1] Department of Epidemiology, Erasmus University Medical Center, Rotterdam, The Netherlands [2] Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, Georgia, USA.

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http://dx.doi.org/10.1038/gim.2013.80DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3883880PMC
January 2014

Clinal distribution of human genomic diversity across the Netherlands despite archaeological evidence for genetic discontinuities in Dutch population history.

Investig Genet 2013 May 20;4(1). Epub 2013 May 20.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, P,O, Box 2040, Rotterdam 3000 CA, Netherlands.

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http://dx.doi.org/10.1186/2041-2223-4-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3707805PMC
May 2013

Indian Ocean crossroads: human genetic origin and population structure in the Maldives.

Am J Phys Anthropol 2013 May 21;151(1):58-67. Epub 2013 Mar 21.

Department of Human Genetics, Leiden University Medical Center, Postzone S5, 2300 RC Leiden, The Netherlands.

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http://dx.doi.org/10.1002/ajpa.22256DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3652038PMC
May 2013

The influence of clan structure on the genetic variation in a single Ghanaian village.

Eur J Hum Genet 2013 Oct 27;21(10):1134-9. Epub 2013 Feb 27.

1] Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands [2] Department of Gerontology and Geriatrics, Leiden University Medical Center, Leiden, The Netherlands.

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http://dx.doi.org/10.1038/ejhg.2013.12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3778349PMC
October 2013

Improved analysis of long STR amplicons from degraded single source and mixed DNA.

Int J Legal Med 2013 Jul 10;127(4):741-7. Epub 2013 Jan 10.

Department of Human Biological Traces (R&D), Netherlands Forensic Institute, P.O. Box 24044, 2490 AA, The Hague, The Netherlands.

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http://link.springer.com/content/pdf/10.1007/s00414-012-0816
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http://link.springer.com/10.1007/s00414-012-0816-1
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http://dx.doi.org/10.1007/s00414-012-0816-1DOI Listing
July 2013

Combining results of forensic STR kits: HDplex validation including allelic association and linkage testing with NGM and Identifiler loci.

Int J Legal Med 2012 Sep 3;126(5):781-9. Epub 2012 Jul 3.

Department of Human Biological Traces (R&D), Netherlands Forensic Institute, P.O. Box 24044, 2490 AA, The Hague, The Netherlands.

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September 2012

Assessment of the stochastic threshold, back- and forward stutter filters and low template techniques for NGM.

Forensic Sci Int Genet 2012 Dec 26;6(6):708-15. Epub 2012 May 26.

Department of Human Biological Traces, Netherlands Forensic Institute, P.O. Box 24044, 2490 AA The Hague, The Netherlands.

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December 2012

Transposon proliferation in an asexual parasitoid.

Mol Ecol 2012 Aug 30;21(16):3898-906. Epub 2012 Apr 30.

Department of Human Genetics, Leiden University Medical Center S4-P, PO Box 9600, 2300 RC Leiden, The Netherlands.

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August 2012

Clonal genetic variation in a Wolbachia-infected asexual wasp: horizontal transmission or historical sex?

Mol Ecol 2011 Sep 14;20(17):3644-52. Epub 2011 Jun 14.

Institute of Biology, Leiden University, 2300 RA Leiden, The Netherlands.

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September 2011

A new future of forensic Y-chromosome analysis: rapidly mutating Y-STRs for differentiating male relatives and paternal lineages.

Forensic Sci Int Genet 2012 Mar 25;6(2):208-18. Epub 2011 May 25.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, 3000 CA Rotterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.fsigen.2011.04.017DOI Listing
March 2012

Improving human forensics through advances in genetics, genomics and molecular biology.

Nat Rev Genet 2011 Mar;12(3):179-92

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, 3000 CA Rotterdam, The Netherlands.

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http://dx.doi.org/10.1038/nrg2952DOI Listing
March 2011

Y-chromosomal variation in sub-Saharan Africa: insights into the history of Niger-Congo groups.

Mol Biol Evol 2011 Mar 25;28(3):1255-69. Epub 2010 Nov 25.

Max Planck Research Group on Comparative Population Linguistics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

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http://dx.doi.org/10.1093/molbev/msq312DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561512PMC
March 2011

Developmental validation of the IrisPlex system: determination of blue and brown iris colour for forensic intelligence.

Forensic Sci Int Genet 2011 Nov 14;5(5):464-71. Epub 2010 Oct 14.

Department of Forensic Molecular Biology, Erasmus MC University Medical Centre, Dr Molewaterplein 50, 3015 GE Rotterdam, Zuid-Holland, The Netherlands.

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November 2011

Evaluating self-declared ancestry of U.S. Americans with autosomal, Y-chromosomal and mitochondrial DNA.

Hum Mutat 2010 Dec;31(12):E1875-93

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1002/humu.21366DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3051415PMC
December 2010

A sensitive method to extract DNA from biological traces present on ammunition for the purpose of genetic profiling.

Int J Legal Med 2011 Jul 24;125(4):597-602. Epub 2010 Apr 24.

Forensic Laboratory for DNA Research, Department of Human Genetics, Leiden University Medical Center, Postzone S-05-P, PO Box 9600, 2300 RC Leiden, The Netherlands.

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http://link.springer.com/10.1007/s00414-010-0454-4
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3115141PMC
July 2011

Developing a set of ancestry-sensitive DNA markers reflecting continental origins of humans.

BMC Genet 2009 Oct 27;10:69. Epub 2009 Oct 27.

Department of Human Biological Traces (R&D), Netherlands Forensic Institute, PO Box 24044, 2490 AA The Hague, The Netherlands.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2775748PMC
October 2009

Tri-allelic SNP markers enable analysis of mixed and degraded DNA samples.

Forensic Sci Int Genet 2009 Sep 9;3(4):233-41. Epub 2009 Mar 9.

Department of Biology (R&D), Netherlands Forensic Institute, 2490 AA The Hague, The Netherlands.

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September 2009

Geographical affinities of the HapMap samples.

PLoS One 2009 4;4(3):e4684. Epub 2009 Mar 4.

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2649532PMC
April 2009

Genetic heterogeneity in regional populations of Quebec--parental lineages in the Gaspe Peninsula.

Am J Phys Anthropol 2009 Aug;139(4):512-22

Centre de Recherche, CHU Sainte-Justine, Montréal, PQ, Canada H3T 1C5.

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http://dx.doi.org/10.1002/ajpa.21012DOI Listing
August 2009

Allele frequency distribution of 21 forensic autosomal STRs in 7 populations from Yunnan, China.

Forensic Sci Int Genet 2008 Dec 18;3(1):e11-2. Epub 2008 Apr 18.

Forensic Laboratory for DNA Research, Leiden University Medical Center, Leiden, The Netherlands.

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December 2008

Evaluation of haplotype discrimination capacity of 35 Y-chromosomal short tandem repeat loci.

Forensic Sci Int 2008 Jan 31;174(2-3):182-8. Epub 2007 May 31.

Biotype AG, Moritzburger Weg 67, 01109 Dresden, Germany.

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January 2008

Hidden African ancestors: hidden secrets of your ancestors.

Authors:
Peter de Knijff

Eur J Hum Genet 2007 May 14;15(5):509-10. Epub 2007 Mar 14.

Department of Human Genetics, Center for Human and Clinical Genetics, Leiden University, Medical Center, P O Box 9600, 2300 RC Leiden, The Netherlands.

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May 2007

Apolipoprotein-E polymorphism and response to pravastatin in men with coronary artery disease (REGRESS).

Acta Cardiol 2006 Jun;61(3):327-31

Department of Pharmacoepidemiology and Pharmacotherapy, Utrecht Institute for Pharmaceutical Sciences (UIPS), Utrecht University, Utrecht, The Netherlands.

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http://dx.doi.org/10.2143/AC.61.3.2014836DOI Listing
June 2006

Allele frequency distribution for 21 autosomal STR loci in Bhutan.

Forensic Sci Int 2007 Jul 24;170(1):68-72. Epub 2006 May 24.

Department of Human Genetics, Postzone S5-P, Leiden University Medical Centre, P.O. Box 9600, 2300 RC, Leiden, The Netherlands.

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July 2007

Proportioning whole-genome single-nucleotide-polymorphism diversity for the identification of geographic population structure and genetic ancestry.

Am J Hum Genet 2006 Apr 14;78(4):680-90. Epub 2006 Feb 14.

Department of Forensic Molecular Biology, Erasmus University Medical Centre Rotterdam, Rotterdam, The Netherlands.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1424693PMC
April 2006

Detection of three single nucleotide polymorphisms in the gene encoding mannose-binding lectin in a single pyrosequencing reaction.

J Immunol Methods 2006 Feb 27;309(1-2):108-14. Epub 2005 Dec 27.

Department of Nephrology, Leiden University Medical Center, Postbox 9600, 2300 RC Leiden, The Netherlands.

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February 2006

26-Locus Y-STR typing in a Bhutanese population sample.

Forensic Sci Int 2006 Aug 14;161(1):1-7. Epub 2005 Nov 14.

Department of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.

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August 2006