Publications by authors named "Peter J Castaldi"

74Publications

Statistical considerations for the analysis of massively parallel reporter assays data.

Genet Epidemiol 2020 Oct 18;44(7):785-794. Epub 2020 Jul 18.

Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts.

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October 2020

Machine Learning and Prediction of All-Cause Mortality in COPD.

Chest 2020 Sep 27;158(3):952-964. Epub 2020 Apr 27.

Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, MA; Division of Pulmonary and Critical Care Medicine, Brigham and Women's Hospital, Boston, MA. Electronic address:

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September 2020

COPDGene 2019: Redefining the Diagnosis of Chronic Obstructive Pulmonary Disease.

Authors:
Katherine E Lowe Elizabeth A Regan Antonio Anzueto Erin Austin John H M Austin Terri H Beaty Panayiotis V Benos Christopher J Benway Surya P Bhatt Eugene R Bleecker Sandeep Bodduluri Jessica Bon Aladin M Boriek Adel Re Boueiz Russell P Bowler Matthew Budoff Richard Casaburi Peter J Castaldi Jean-Paul Charbonnier Michael H Cho Alejandro Comellas Douglas Conrad Corinne Costa Davis Gerard J Criner Douglas Curran-Everett Jeffrey L Curtis Dawn L DeMeo Alejandro A Diaz Mark T Dransfield Jennifer G Dy Ashraf Fawzy Margaret Fleming Eric L Flenaugh Marilyn G Foreman Spyridon Fortis Hirut Gebrekristos Sarah Grant Philippe A Grenier Tian Gu Abhya Gupta MeiLan K Han Nicola A Hanania Nadia N Hansel Lystra P Hayden Craig P Hersh Brian D Hobbs Eric A Hoffman James C Hogg John E Hokanson Karin F Hoth Albert Hsiao Stephen Humphries Kathleen Jacobs Francine L Jacobson Ella A Kazerooni Victor Kim Woo Jin Kim Gregory L Kinney Harald Koegler Sharon M Lutz David A Lynch Neil R MacIntye Barry J Make Nathaniel Marchetti Fernando J Martinez Diego J Maselli Anne M Mathews Meredith C McCormack Merry-Lynn N McDonald Charlene E McEvoy Matthew Moll Sarah S Molye Susan Murray Hrudaya Nath John D Newell Mariaelena Occhipinti Matteo Paoletti Trisha Parekh Massimo Pistolesi Katherine A Pratte Nirupama Putcha Margaret Ragland Joseph M Reinhardt Stephen I Rennard Richard A Rosiello James C Ross Harry B Rossiter Ingo Ruczinski Raul San Jose Estepar Frank C Sciurba Jessica C Sieren Harjinder Singh Xavier Soler Robert M Steiner Matthew J Strand William W Stringer Ruth Tal-Singer Byron Thomashow Gonzalo Vegas Sánchez-Ferrero John W Walsh Emily S Wan George R Washko J Michael Wells Chris H Wendt Gloria Westney Ava Wilson Robert A Wise Andrew Yen Kendra Young Jeong Yun Edwin K Silverman James D Crapo

Chronic Obstr Pulm Dis 2019 Nov;6(5):384-399

National Jewish Health, Denver, Colorado.

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November 2019

Unsupervised discovery of phenotype-specific multi-omics networks.

Bioinformatics 2019 11;35(21):4336-4343

Department of Biostatistics and Informatics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.

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November 2019

Blood eosinophil count thresholds and exacerbations in patients with chronic obstructive pulmonary disease.

J Allergy Clin Immunol 2018 06 28;141(6):2037-2047.e10. Epub 2018 Apr 28.

Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, Mass; Division of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, Mass; Harvard Medical School, Boston, Mass. Electronic address:

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June 2018

Integrative genomics identifies new genes associated with severe COPD and emphysema.

Respir Res 2018 03 22;19(1):46. Epub 2018 Mar 22.

Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital, 181 Longwood Avenue, Room 451, Boston, MA, 02115, USA.

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March 2018

The value of blood cytokines and chemokines in assessing COPD.

Respir Res 2017 10 24;18(1):180. Epub 2017 Oct 24.

Division of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, National Jewish Health, 1400 Jackson St., K715, Denver, CO, 80206, USA.

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October 2017

RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.

BMC Med Genomics 2017 10 6;10(1):58. Epub 2017 Oct 6.

Channing Division of Network Medicine, Brigham and Women's Hospital, 181 Longwood Ave, Boston, MA, USA.

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October 2017

Lobar Emphysema Distribution Is Associated With 5-Year Radiological Disease Progression.

Chest 2018 01 21;153(1):65-76. Epub 2017 Sep 21.

Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA; Division of General Medicine and Primary Care, Brigham and Women's Hospital, Harvard Medical School, Boston, MA. Electronic address:

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January 2018

Subtyping Chronic Obstructive Pulmonary Disease Using Peripheral Blood Proteomics.

Chronic Obstr Pulm Dis 2017 Feb 8;4(2):97-108. Epub 2017 Feb 8.

Channing Division of Network Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.

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February 2017

Screening for interaction effects in gene expression data.

PLoS One 2017 16;12(3):e0173847. Epub 2017 Mar 16.

Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, United States of America.

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September 2017

Genetic loci associated with chronic obstructive pulmonary disease overlap with loci for lung function and pulmonary fibrosis.

Nat Genet 2017 Mar 6;49(3):426-432. Epub 2017 Feb 6.

Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, Massachusetts, USA.

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March 2017

Whole genome prediction and heritability of childhood asthma phenotypes.

Immun Inflamm Dis 2016 12 28;4(4):487-496. Epub 2016 Nov 28.

Channing Division of Network Medicine Brigham and Women's Hospital and Harvard Medical School Boston Massachusetts.

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December 2016

Bipartite Community Structure of eQTLs.

PLoS Comput Biol 2016 09 12;12(9):e1005033. Epub 2016 Sep 12.

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.

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September 2016

A Novel Spirometric Measure Identifies Mild COPD Unidentified by Standard Criteria.

Chest 2016 Nov 22;150(5):1080-1090. Epub 2016 Jul 22.

Rehabilitation Clinical Trials Center, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, CA.

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November 2016

Recognizing the Many Faces of Chronic Obstructive Pulmonary Disease.

Am J Respir Crit Care Med 2016 06;193(11):1190-2

3 Department of Medicine Perelman School of Medicine Philadelphia, Pennsylvania and.

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June 2016

External validation of new risk prediction models is infrequent and reveals worse prognostic discrimination.

J Clin Epidemiol 2015 Jan 23;68(1):25-34. Epub 2014 Oct 23.

Department of Medicine, Stanford Prevention Research Center, Stanford University School of Medicine, 1265 Welch Rd, MSOB X306, Stanford, CA 94305, USA; Department of Health Research and Policy, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Statistics, Stanford University School of Humanities and Sciences, Stanford, CA 94305, USA. Electronic address:

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January 2015

Phenotypic and genetic heterogeneity among subjects with mild airflow obstruction in COPDGene.

Respir Med 2014 Oct 11;108(10):1469-80. Epub 2014 Aug 11.

Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, MA, USA; Division of Pulmonary and Critical Care Medicine, Brigham and Women's Hospital, Boston, MA, USA. Electronic address:

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October 2014

Heritability of chronic obstructive pulmonary disease and related phenotypes in smokers.

Am J Respir Crit Care Med 2013 Oct;188(8):941-7

1 Biostatistics Department, Harvard School of Public Health, Boston, Massachusetts.

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October 2013

The association of genome-wide significant spirometric loci with chronic obstructive pulmonary disease susceptibility.

Am J Respir Cell Mol Biol 2011 Dec 9;45(6):1147-53. Epub 2011 Jun 9.

Institute for Clinical Research and Health Policy Studies, Tufts Medical Center, Boston, Massachusetts, USA.

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December 2011

An empirical assessment of validation practices for molecular classifiers.

Brief Bioinform 2011 May 7;12(3):189-202. Epub 2011 Feb 7.

Institute for Clinical Research and Health Policy Studies at Tufts Medical Center, USA.

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May 2011

Systematic review: Anti-epidermal growth factor receptor treatment effect modification by KRAS mutations in advanced colorectal cancer.

Ann Intern Med 2011 Jan;154(1):37-49

Center for Clinical Evidence Synthesis, Institute for Clinical Research and Health Policy Studies, Tufts Medical Center, Boston, Massachusetts 02111, USA.

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January 2011

Laboratory mouse models for the human genome-wide associations.

PLoS One 2010 Nov 1;5(11):e13782. Epub 2010 Nov 1.

Institute for Clinical Research and Health Policy Studies, Tufts Medical Center, Boston, Massachusetts, United States of America.

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November 2010

Inhaler costs and medication nonadherence among seniors with chronic pulmonary disease.

Chest 2010 Sep 23;138(3):614-20. Epub 2010 Apr 23.

Institute for Clinical Research and Health Policy Studies, Tufts Medical Center, Boston, MA 02111, USA.

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September 2010

Genetic associations with hypoxemia and pulmonary arterial pressure in COPD.

Chest 2009 Mar 18;135(3):737-744. Epub 2008 Nov 18.

Channing Laboratory, Brigham and Women's Hospital, Harvard Medical School, Boston, MA.

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March 2009