Pengyuan Liu

Pengyuan Liu

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Pengyuan Liu

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Phenolic compounds present in fruit extracts of Malus spp. show antioxidative and pro-apoptotic effects on human gastric cancer cell lines.

J Food Biochem 2019 Nov 1;43(11):e13028. Epub 2019 Sep 1.

Institute of Ornamantal Plants, Northwest A&F University, Yangling, China.

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http://dx.doi.org/10.1111/jfbc.13028DOI Listing
November 2019

Long noncoding RNA LCAT1 functions as a ceRNA to regulate RAC1 function by sponging miR-4715-5p in lung cancer.

Mol Cancer 2019 Nov 29;18(1):171. Epub 2019 Nov 29.

Center for Uterine Cancer Diagnosis & Therapy Research of Zhejiang Province, Women's Reproductive Health Key Laboratory of Zhejiang Province, Department of Gynecologic Oncology, Women's Hospital and Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang, 310006, Hangzhou, China.

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http://dx.doi.org/10.1186/s12943-019-1107-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6883523PMC
November 2019

Dietary Effects on Dahl Salt-Sensitive Hypertension, Renal Damage, and the T Lymphocyte Transcriptome.

Hypertension 2019 10 3;74(4):854-863. Epub 2019 Sep 3.

From the Department of Physiology (J.M.A.-B., A.J.A., X.P., D.J.F., J.H.D., H.L., M.L.R., A.J.K., A.W.C., P.L., M.L., D.L.M.), Medical College of Wisconsin.

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http://dx.doi.org/10.1161/HYPERTENSIONAHA.119.12927DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6739138PMC
October 2019

CircPLEKHM3 acts as a tumor suppressor through regulation of the miR-9/BRCA1/DNAJB6/KLF4/AKT1 axis in ovarian cancer.

Mol Cancer 2019 10 17;18(1):144. Epub 2019 Oct 17.

Center for Uterine Cancer Diagnosis & Therapy Research of Zhejiang Province, Women's Reproductive Health Key Laboratory of Zhejiang Province, and Department of Gynecologic Oncology, Women's Hospital, Zhejiang University School of Medicine, Hangzhou, 310029, Zhejiang, China.

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http://dx.doi.org/10.1186/s12943-019-1080-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796346PMC
October 2019

Adverse early-life environment impairs postnatal lung development in mice.

Physiol Genomics 2019 Sep 2;51(9):462-470. Epub 2019 Aug 2.

Department of Pediatrics, Medical College of Wisconsin, Milwaukee, Wisconsin and.

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http://dx.doi.org/10.1152/physiolgenomics.00016.2019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6766700PMC
September 2019

Long Noncoding RNA: Genomics and Relevance to Physiology.

Compr Physiol 2019 Jun 12;9(3):933-946. Epub 2019 Jun 12.

Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.

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http://dx.doi.org/10.1002/cphy.c180032DOI Listing
June 2019

DriverML: a machine learning algorithm for identifying driver genes in cancer sequencing studies.

Nucleic Acids Res 2019 05;47(8):e45

Center for Uterine Cancer Diagnosis and Therapy Research of Zhejiang Province, Women's Reproductive Health Key Laboratory of Zhejiang Province, Women's Hospital and Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310006, China.

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http://dx.doi.org/10.1093/nar/gkz096DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6486576PMC
May 2019

Exosomal let-7d-3p and miR-30d-5p as diagnostic biomarkers for non-invasive screening of cervical cancer and its precursors.

Mol Cancer 2019 04 2;18(1):76. Epub 2019 Apr 2.

Center for Uterine Cancer Diagnosis & Therapy Research of Zhejiang Province, Women's Reproductive Health Key Laboratory of Zhejiang Province, Department of Gynecologic Oncology, Women's Hospital, Zhejiang University School of Medicine, Hangzhou, China.

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http://dx.doi.org/10.1186/s12943-019-0999-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6446401PMC
April 2019

Salt-deficient diet exacerbates cystogenesis in ARPKD via epithelial sodium channel (ENaC).

EBioMedicine 2019 Feb 8;40:663-674. Epub 2019 Feb 8.

Department of Physiology, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI 53226, USA; Clement J. Zablocki VA Medical Center, 5000 West National Avenue, Milwaukee, WI, 53295, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ebiom.2019.01.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6413684PMC
February 2019

Urinary Metabolites Associated with Blood Pressure on a Low- or High-Sodium Diet.

Theranostics 2018 5;8(6):1468-1480. Epub 2018 Feb 5.

Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.

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http://dx.doi.org/10.7150/thno.22018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5858161PMC
January 2019

MicroRNA-668 represses MTP18 to preserve mitochondrial dynamics in ischemic acute kidney injury.

J Clin Invest 2018 12 12;128(12):5448-5464. Epub 2018 Nov 12.

Department of Cellular Biology and Anatomy, Medical College of Georgia at Augusta University, Augusta, Georgia, USA.

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http://www.jci.org/articles/view/121859
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http://dx.doi.org/10.1172/JCI121859DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6264638PMC
December 2018

Role of DNA De Novo (De)Methylation in the Kidney in Salt-Induced Hypertension.

Hypertension 2018 11;72(5):1160-1171

Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee (P.L., Y. Liu, X.P., Y. Li, K.U., M.K.M., M.L.).

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https://www.ahajournals.org/doi/10.1161/HYPERTENSIONAHA.118.
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http://dx.doi.org/10.1161/HYPERTENSIONAHA.118.11650DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6314686PMC
November 2018

MicroRNA-214-3p in the Kidney Contributes to the Development of Hypertension.

J Am Soc Nephrol 2018 10 26;29(10):2518-2528. Epub 2018 Jul 26.

Center of Systems Molecular Medicine, Department of Physiology,

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http://dx.doi.org/10.1681/ASN.2018020117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6171279PMC
October 2018

A comprehensive evaluation of alignment software for reduced representation bisulfite sequencing data.

Bioinformatics 2018 08;34(16):2715-2723

Department of Respiratory Medicine, Sir Run Run Shaw Hospital and Institute of Translational Medicine.

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http://dx.doi.org/10.1093/bioinformatics/bty174DOI Listing
August 2018

Circ2Disease: a manually curated database of experimentally validated circRNAs in human disease.

Sci Rep 2018 07 20;8(1):11018. Epub 2018 Jul 20.

Sir Run Run Shaw Hospital and Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou, Zhejiang, 310016, China.

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http://dx.doi.org/10.1038/s41598-018-29360-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6054656PMC
July 2018

Smoker and non-smoker lung adenocarcinoma is characterized by distinct tumor immune microenvironments.

Oncoimmunology 2018 30;7(10):e1494677. Epub 2018 Jul 30.

Department of Respiratory Medicine, Sir Run Run Shaw Hospital and Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China.

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https://www.tandfonline.com/doi/full/10.1080/2162402X.2018.1
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http://dx.doi.org/10.1080/2162402X.2018.1494677DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6169585PMC
July 2018

Genome-wide map of proximity linkage to renin proximal promoter in rat.

Physiol Genomics 2018 05 9;50(5):323-331. Epub 2018 Mar 9.

Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin , Milwaukee, Wisconsin.

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http://dx.doi.org/10.1152/physiolgenomics.00132.2017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6008118PMC
May 2018

Artificial intelligence, physiological genomics, and precision medicine.

Physiol Genomics 2018 04 26;50(4):237-243. Epub 2018 Jan 26.

Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin , Milwaukee, Wisconsin.

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http://dx.doi.org/10.1152/physiolgenomics.00119.2017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5966805PMC
April 2018

Quantitative Comparisons of Large Numbers of Human Plasma Samples Using TMT10plex Labeling.

Methods Mol Biol 2017 ;1619:319-337

The Wistar Institute, 3601 Spruce Street, Philadelphia, PA, 19104, USA.

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http://dx.doi.org/10.1007/978-1-4939-7057-5_22DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5558196PMC
March 2018

Efficient Quantitative Comparisons of Plasma Proteomes Using Label-Free Analysis with MaxQuant.

Methods Mol Biol 2017 ;1619:339-352

The Wistar Institute, 3601 Spruce Street, Philadelphia, PA, 19104, USA.

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http://dx.doi.org/10.1007/978-1-4939-7057-5_23DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5575765PMC
March 2018

MicroRNA-21 regulates peroxisome proliferator-activated receptor alpha, a molecular mechanism of cardiac pathology in Cardiorenal Syndrome Type 4.

Kidney Int 2018 02 29;93(2):375-389. Epub 2017 Jul 29.

Department of Physiology, Medical College of Wisconsin, Milwaukee, Wisconsin, USA; Center of Systems Molecular Medicine, Medical College of Wisconsin, Milwaukee, Wisconsin, USA. Electronic address:

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http://dx.doi.org/10.1016/j.kint.2017.05.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5787401PMC
February 2018

Atmospheric pressure neutral reionization mass spectrometry for structural analysis.

Chem Sci 2017 Sep 21;8(9):6499-6507. Epub 2017 Jul 21.

Center for Intelligent Chemical Instrumentation , Department of Chemistry and Biochemistry , Edison Biotechnology Institute , Ohio University , Athens , OH , USA 45701 . Email:

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http://dx.doi.org/10.1039/c7sc01999hDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628576PMC
September 2017

Targeted, Deep Sequencing Reveals Full Methylation Profiles of Multiple HPV Types and Potential Biomarkers for Cervical Cancer Progression.

Cancer Epidemiol Biomarkers Prev 2017 04 9;26(4):642-650. Epub 2017 Jan 9.

Department of Obstetrics and Gynecology, Medical College of Wisconsin, Milwaukee, Wisconsin.

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http://dx.doi.org/10.1158/1055-9965.EPI-16-0368DOI Listing
April 2017

Changes in miRNA in the lung and whole blood after whole thorax irradiation in rats.

Sci Rep 2017 03 17;7:44132. Epub 2017 Mar 17.

Department of Radiation Oncology, Medical College of Wisconsin, Milwaukee, WI, USA.

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http://dx.doi.org/10.1038/srep44132DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5355888PMC
March 2017

Identifying Candidate Genes that Underlie Cellular pH Sensitivity in Serotonin Neurons Using Transcriptomics: A Potential Role for Kir5.1 Channels.

Front Cell Neurosci 2017 21;11:34. Epub 2017 Feb 21.

Department of Physiology, Medical College of Wisconsin, MilwaukeeWI, USA; Neuroscience Research Center, Medical College of Wisconsin, MilwaukeeWI, USA; Center for Systems Molecular Medicine, Medical College of Wisconsin, MilwaukeeWI, USA.

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http://dx.doi.org/10.3389/fncel.2017.00034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5318415PMC
February 2017

Raphe gene expression changes implicate immune-related functions in ventilatory plasticity following carotid body denervation in rats.

Exp Neurol 2017 Jan 29;287(Pt 2):102-112. Epub 2016 Apr 29.

Department of Physiology, Medical College of Wisconsin, Milwaukee, WI 53226, United States; Neuroscience Research Center, Medical College of Wisconsin, Milwaukee, WI 53226, United States.

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http://dx.doi.org/10.1016/j.expneurol.2016.04.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5086315PMC
January 2017

The β-TrCP-FBXW2-SKP2 axis regulates lung cancer cell growth with FBXW2 acting as a tumour suppressor.

Nat Commun 2017 01 16;8:14002. Epub 2017 Jan 16.

Division of Radiation and Cancer Biology, Department of Radiation Oncology, University of Michigan, Ann Arbor, Michigan 48109, USA.

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http://dx.doi.org/10.1038/ncomms14002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5241824PMC
January 2017

MicroRNA-489 Induction by Hypoxia-Inducible Factor-1 Protects against Ischemic Kidney Injury.

J Am Soc Nephrol 2016 09 14;27(9):2784-96. Epub 2016 Mar 14.

Department of Cellular Biology and Anatomy, Medical College of Georgia at Augusta University and Charlie Norwood Veterans Affairs Medical Center, Augusta, Georgia; The Second Xiangya Hospital, Central South University, Changsha, China

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http://dx.doi.org/10.1681/ASN.2015080870DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5004659PMC
September 2016

Coupling Electrochemistry with Probe Electrospray Ionization Mass Spectrometry.

Chemphyschem 2016 Apr 11;17(8):1104-8. Epub 2016 Feb 11.

Center for Intelligent Chemical Instrumentation, Department of Chemistry and Biochemistry, Edison Biotechnology Institute, Ohio University, Athens, OH, 45701, USA.

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http://doi.wiley.com/10.1002/cphc.201600033
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http://dx.doi.org/10.1002/cphc.201600033DOI Listing
April 2016

Identification of Cathepsin K in the Peritoneal Metastasis of Ovarian Carcinoma Using In-silico, Gene Expression Analysis.

J Cancer 2016 26;7(6):722-9. Epub 2016 Mar 26.

6. Department of Surgical Pathology, Women's Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China.

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http://dx.doi.org/10.7150/jca.14277DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829559PMC
April 2016

Pappa2 is linked to salt-sensitive hypertension in Dahl S rats.

Physiol Genomics 2016 Jan 3;48(1):62-72. Epub 2015 Nov 3.

Department of Physiology, Medical College of Wisconsin, Milwaukee, Wisconsin;

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http://dx.doi.org/10.1152/physiolgenomics.00097.2015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4757026PMC
January 2016

Endogenous microRNAs in human microvascular endothelial cells regulate mRNAs encoded by hypertension-related genes.

Hypertension 2015 Oct 17;66(4):793-9. Epub 2015 Aug 17.

From the Department of Physiology, Center of Systems Molecular Medicine, Medical College of Wisconsin, Milwaukee.

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http://dx.doi.org/10.1161/HYPERTENSIONAHA.115.05645DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567475PMC
October 2015

deGPS is a powerful tool for detecting differential expression in RNA-sequencing studies.

BMC Genomics 2015 Jun 13;16:455. Epub 2015 Jun 13.

Department of Gynecologic Oncology, The Affiliated Women's Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, 310029, China.

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http://dx.doi.org/10.1186/s12864-015-1676-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4465298PMC
June 2015

An accurate mass spectrometric approach for the simultaneous comparison of GSH, Cys, and Hcy in L02 cells and HepG2 cells using new NPSP isotope probes.

Chem Commun (Camb) 2015 Jun;51(56):11317-20

College of Chemistry, Chemical Engineering and Materials Science, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Shandong Normal University, Jinan, 250014, China.

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http://dx.doi.org/10.1039/c5cc03157eDOI Listing
June 2015

Genome-wide epigenetic and proteomic analysis reveals altered Notch signaling in EPC dysfunction.

Physiol Rep 2015 Apr;3(4)

Biotechnology and Bioengineering Center, Medical College of Wisconsin, Milwaukee, Wisconsin Department of Physiology, Medical College of Wisconsin, Milwaukee, Wisconsin

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http://dx.doi.org/10.14814/phy2.12358DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4425964PMC
April 2015

Maternal diet during gestation and lactation modifies the severity of salt-induced hypertension and renal injury in Dahl salt-sensitive rats.

Hypertension 2015 Feb 1;65(2):447-55. Epub 2014 Dec 1.

From the Departments of Physiology (A.M.G., D.L.M., P.L., M.M.S., T.M.K., C.Y., B.T.E., J.K., M.L., A.W.C.), Pediatrics (E.C.), and Cardiovascular Research Center (A.M.G.), Medical College of Wisconsin, Milwaukee.

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http://dx.doi.org/10.1161/HYPERTENSIONAHA.114.04179DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4289102PMC
February 2015

Improved rat genome gene prediction by integration of ESTs with RNA-Seq information.

Bioinformatics 2015 Jan 12;31(1):25-32. Epub 2014 Sep 12.

Department of Gynecologic Oncology, The Affiliated Women's Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang 310006, Institute of Bioinformatics, Zhejiang University, Hangzhou, Zhejiang 310058, China, Division of Respiratory Medicine, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang 310058, China, Department of Physiology and the Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA and Human Molecular and Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA Department of Gynecologic Oncology, The Affiliated Women's Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang 310006, Institute of Bioinformatics, Zhejiang University, Hangzhou, Zhejiang 310058, China, Division of Respiratory Medicine, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang 310058, China, Department of Physiology and the Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA and Human Molecular and Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btu608DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4296142PMC
January 2015

Nuclear magnetic resonance structure elucidation of peptide b2 ions.

Angew Chem Int Ed Engl 2015 Jan 10;54(5):1547-50. Epub 2014 Dec 10.

Center for Intelligent Chemical Instrumentation, Department of Chemistry and Biochemistry & Edison Biotechnology Institute, Ohio University, Athens, OH 45701 (USA).

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http://dx.doi.org/10.1002/anie.201410250DOI Listing
January 2015

Characteristics of long non-coding RNAs in the Brown Norway rat and alterations in the Dahl salt-sensitive rat.

Sci Rep 2014 Nov 21;4:7146. Epub 2014 Nov 21.

1] Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA [2] Center of Systems Molecular Medicine, Medical College of Wisconsin, Milwaukee, WI, USA.

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http://dx.doi.org/10.1038/srep07146DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4894415PMC
November 2014

A phase Ib study of the effects of black raspberries on rectal polyps in patients with familial adenomatous polyposis.

Cancer Prev Res (Phila) 2014 Jul 24;7(7):666-74. Epub 2014 Apr 24.

Authors' Affiliations: Division of Hematology and Oncology, Department of Medicine;

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http://dx.doi.org/10.1158/1940-6207.CAPR-14-0052DOI Listing
July 2014

Base-resolution maps of 5-methylcytosine and 5-hydroxymethylcytosine in Dahl S rats: effect of salt and genomic sequence.

Hypertension 2014 Apr 13;63(4):827-38. Epub 2014 Jan 13.

Department of Physiology, Medical College of Wisconsin, Milwaukee, WI 53226. or

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http://dx.doi.org/10.1161/HYPERTENSIONAHA.113.02637DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4315612PMC
April 2014

Development of solvent-free ambient mass spectrometry for green chemistry applications.

Anal Chem 2014 Apr 4;86(8):4024-32. Epub 2014 Apr 4.

Center for Intelligent Chemical Instrumentation, †Department of Chemistry and Biochemistry, ‡Edison Biotechnology Institute, Ohio University , Athens, Ohio 45701, United States.

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http://dx.doi.org/10.1021/ac500527qDOI Listing
April 2014

Cancer genomics: new software tools making sequencing more accessible.

Per Med 2014 Mar;11(2):127-130

Department of Physiology & the Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.

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http://dx.doi.org/10.2217/pme.13.108DOI Listing
March 2014

Identification of the transforming STRN-ALK fusion as a potential therapeutic target in the aggressive forms of thyroid cancer.

Proc Natl Acad Sci U S A 2014 Mar 3;111(11):4233-8. Epub 2014 Feb 3.

Department of Pathology and Laboratory Medicine, Department of Pharmacology and Chemical Biology, Department of Otolaryngology, Department of Surgery, Division of Endocrine Surgery, and Department of Medicine, Division of Endocrinology and Metabolism, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213.

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http://dx.doi.org/10.1073/pnas.1321937111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964116PMC
March 2014

Whole-genome sequencing identifies genomic heterogeneity at a nucleotide and chromosomal level in bladder cancer.

Proc Natl Acad Sci U S A 2014 Feb 27;111(6):E672-81. Epub 2014 Jan 27.

Center for Personalized Medicine and Departments of Pharmacology and Therapeutics, Cancer Genetics, Biostatistics and Bioinformatics, Pathology, Urology, Molecular and Cellular Biology, and Medicine, Roswell Park Cancer Institute, Buffalo, NY 14263.

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http://dx.doi.org/10.1073/pnas.1313580111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3926024PMC
February 2014

Characteristics of microRNAs enriched in specific cell types and primary tissue types in solid organs.

Physiol Genomics 2013 Dec 1;45(23):1144-56. Epub 2013 Oct 1.

Department of Physiology, Medical College of Wisconsin, Milwaukee, Wisconsin;

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http://dx.doi.org/10.1152/physiolgenomics.00090.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3882707PMC
December 2013

Measuring protein-ligand interactions using liquid sample desorption electrospray ionization mass spectrometry.

Anal Chem 2013 Dec 22;85(24):11966-72. Epub 2013 Nov 22.

Department of Chemistry and Biochemistry and ‡Department of Biological Chemistry, David Geffen School of Medicine, University of California-Los Angeles , Los Angeles, California 90095, United States.

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http://pubs.acs.org/doi/10.1021/ac402906d
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http://dx.doi.org/10.1021/ac402906dDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3901310PMC
December 2013

Concordant effects of aromatase inhibitors on gene expression in ER+ Rat and human mammary cancers and modulation of the proteins coded by these genes.

Cancer Prev Res (Phila) 2013 Nov 25;6(11):1151-61. Epub 2013 Sep 25.

University of Alabama at Birmingham, 1670 University Boulevard, Volker Hall G-78-D Box 800, Birmingham, AL 35294.

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http://dx.doi.org/10.1158/1940-6207.CAPR-13-0126DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3874590PMC
November 2013

Recent advances of electrochemical mass spectrometry.

Analyst 2013 Oct;138(19):5519-39

Center for Intelligent Chemical Instrumentation, Department of Chemistry and Biochemistry, Ohio University, Athens, OH, USA45701.

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http://dx.doi.org/10.1039/c3an00709jDOI Listing
October 2013

DrGaP: a powerful tool for identifying driver genes and pathways in cancer sequencing studies.

Am J Hum Genet 2013 Sep 15;93(3):439-51. Epub 2013 Aug 15.

Department of Physiology and the Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.

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http://dx.doi.org/10.1016/j.ajhg.2013.07.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3769934PMC
September 2013

Highly efficient ionization of phosphopeptides at low pH by desorption electrospray ionization mass spectrometry.

Analyst 2013 Mar;138(5):1321-1324

Center for Intelligent Chemical Instrumentation, Department of Chemistry and Biochemistry, Ohio University, Athens, OH, USA 45701.

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http://dx.doi.org/10.1039/c3an36737aDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3938891PMC
March 2013

Neutrophils are required for 3-methylcholanthrene-initiated, butylated hydroxytoluene-promoted lung carcinogenesis.

Mol Carcinog 2012 Dec 17;51(12):993-1002. Epub 2011 Oct 17.

Department of Surgery, Washington University School of Medicine, St. Louis, Missouri 63110, USA.

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http://dx.doi.org/10.1002/mc.20870DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3389580PMC
December 2012

WNT1-inducible signaling pathway protein 1 contributes to ventilator-induced lung injury.

Am J Respir Cell Mol Biol 2012 Oct 14;47(4):528-35. Epub 2012 Jun 14.

Department of Anesthesiology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA.

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http://dx.doi.org/10.1165/rcmb.2012-0127OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488625PMC
October 2012

Gas phase chemistry of Li+ with amides: the observation of LiOH loss in mass spectrometry.

J Am Soc Mass Spectrom 2012 Jul 2;23(7):1191-201. Epub 2012 May 2.

Department of Chemistry, Zhejiang University, Hangzhou, 310027, China.

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http://dx.doi.org/10.1007/s13361-012-0389-8DOI Listing
July 2012

Study of electrochemical reactions using nanospray desorption electrospray ionization mass spectrometry.

Anal Chem 2012 Jul 21;84(13):5737-43. Epub 2012 Jun 21.

Center for Intelligent Chemical Instrumentation, Department of Chemistry and Biochemistry, Clippinger Laboratories, Ohio University, Athens, Ohio 45701, United States.

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http://dx.doi.org/10.1021/ac300916kDOI Listing
July 2012

Gene-expression signature predicts postoperative recurrence in stage I non-small cell lung cancer patients.

PLoS One 2012 23;7(1):e30880. Epub 2012 Jan 23.

Department of Physiology and the Cancer Center, Medical College of Wisconsin, Milwaukee, Wisconsin, United States of America.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3264655PMC
June 2012

Modulation of gene expression and cell-cycle signaling pathways by the EGFR inhibitor gefitinib (Iressa) in rat urinary bladder cancer.

Cancer Prev Res (Phila) 2012 Feb 7;5(2):248-59. Epub 2011 Oct 7.

Department of Surgery and The Alvin J. Siteman Cancer Center, Washington University School of Medicine, Saint Louis, Missouri, USA.

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http://cancerpreventionresearch.aacrjournals.org/cgi/doi/10.
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http://dx.doi.org/10.1158/1940-6207.CAPR-10-0363DOI Listing
February 2012

Genome-wide association and fine mapping of genetic loci predisposing to colon carcinogenesis in mice.

Mol Cancer Res 2012 Jan 29;10(1):66-74. Epub 2011 Nov 29.

Department of Physiology and the Cancer Center, Medical College of Wisconsin, Milwaukee, Wisconsin 53226, USA.

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http://dx.doi.org/10.1158/1541-7786.MCR-10-0540DOI Listing
January 2012

Haplotype association mapping of acute lung injury in mice implicates activin a receptor, type 1.

Am J Respir Crit Care Med 2011 Jun 4;183(11):1499-509. Epub 2011 Feb 4.

Department of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 15219-3130, USA.

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http://dx.doi.org/10.1164/rccm.201006-0912OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137140PMC
June 2011

Aerosolized bexarotene inhibits lung tumorigenesis without increasing plasma triglyceride and cholesterol levels in mice.

Cancer Prev Res (Phila) 2011 Feb 16;4(2):270-6. Epub 2010 Dec 16.

Department of Surgery, Washington University School of Medicine, St Louis, MO 63110, USA.

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http://dx.doi.org/10.1158/1940-6207.CAPR-10-0246DOI Listing
February 2011

TNFRSF11A and TNFSF11 are associated with age at menarche and natural menopause in white women.

Menopause 2010 Sep-Oct;17(5):1048-54

Department of Surgery, Washington University in St. Louis, St. Louis, MO, USA.

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http://dx.doi.org/10.1097/gme.0b013e3181d5d523DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2939156PMC
January 2011

Functional genomics of chlorine-induced acute lung injury in mice.

Proc Am Thorac Soc 2010 Jul;7(4):294-6

Department of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, 100 Technology Drive, Pittsburgh, PA 15219-3130, USA.

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http://dx.doi.org/10.1513/pats.201001-005SMDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3136967PMC
July 2010

ALOX12 gene is associated with the onset of natural menopause in white women.

Menopause 2010 Jan-Feb;17(1):152-6

Department of Surgery, Washington University in St Louis, St Louis, MO, USA.

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http://dx.doi.org/10.1097/gme.0b013e3181b63c68DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2927106PMC
May 2010

Ion-neutral complexes resulting from dissociative protonation: fragmentation of alpha-furanylmethyl benzyl ethers and 4-N,N-dimethylbenzyl benzyl ethers.

J Am Soc Mass Spectrom 2010 Apr 28;21(4):626-34. Epub 2009 Dec 28.

Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang, China.

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http://dx.doi.org/10.1016/j.jasms.2009.12.005DOI Listing
April 2010

Mechanism study of SO2 elimination from sulfonamides by negative electrospray ionization mass spectrometry.

Rapid Commun Mass Spectrom 2008 Sep;22(17):2715-22

Department of Chemistry, Zhejiang University, Hangzhou 310027, China.

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http://dx.doi.org/10.1002/rcm.3672DOI Listing
September 2008

Common human cancer genes discovered by integrated gene-expression analysis.

PLoS One 2007 Nov 7;2(11):e1149. Epub 2007 Nov 7.

Department of Surgery and the Alvin J. Siteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri, United States of America.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2065803PMC
November 2007

Large-scale in silico mapping of complex quantitative traits in inbred mice.

PLoS One 2007 Jul 25;2(7):e651. Epub 2007 Jul 25.

Department of Surgery and the Alvin J. Siteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri, United States of America.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1920557PMC
July 2007

Candidate lung tumor susceptibility genes identified through whole-genome association analyses in inbred mice.

Nat Genet 2006 Aug 23;38(8):888-95. Epub 2006 Jul 23.

Department of Surgery and the Alvin J. Siteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri 63110, USA.

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http://dx.doi.org/10.1038/ng1849DOI Listing
August 2006

Paternal uniparental isodisomy of the entire chromosome 3 revealed in a person with no apparent phenotypic disorders.

Hum Mutat 2006 Feb;27(2):133-7

Department of Biomedical Sciences, School of Medicine, Creighton University, Omaha, Nebraska, USA.

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http://dx.doi.org/10.1002/humu.20302DOI Listing
February 2006