Publications by authors named "Pavlos Pavlidis"

80Publications

Demographic analyses of a new sample of haploid genomes from a Swedish population of Drosophila melanogaster.

Sci Rep 2020 12 29;10(1):22415. Epub 2020 Dec 29.

Department of Comparative Development and Genetics, Max Planck Institute for Plant Breeding Research, 50829, Köln, Germany.

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December 2020

Of dogs and men.

Science 2020 10;370(6516):522-523

Middle East Technical University, 06800 Ankara, Turkey.

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October 2020

Endoscopic sinus surgery outcomes in CRS: quality of life and correlations with NOSE scale in a prospective cohort study.

Eur Arch Otorhinolaryngol 2020 Sep 8. Epub 2020 Sep 8.

Department of Otolaryngology, University Hospital of Larisa, University of Thessaly, Larissa, Greece.

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September 2020

Gender Differences in Short-term Memory Related to Music Genres.

Neuroscience 2020 11 4;448:266-271. Epub 2020 Sep 4.

3rd University Department of Psychiatry, AHEPA University General Hospital - Department of Mental Health, Aristotle University - Faculty of Medicine, GR 54124 Thessaloniki, Greece.

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November 2020

Genome scans for selection and introgression based on k-nearest neighbour techniques.

Mol Ecol Resour 2020 Nov 20;20(6):1597-1609. Epub 2020 Jul 20.

Research Unit of Statistical Bioinformatics, Institute for Medical Informatics, Statistics and Documentation, Medical University of Graz, Graz, Austria.

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November 2020

Anatomical Localization of Traumatic Brain Injury Cases in Eastern Macedonia and Thrace, Greece: a 10-year Retrospective Observational Study.

Korean J Neurotrauma 2020 Apr 17;16(1):38-48. Epub 2020 Apr 17.

Department of Neurosurgery, Democritus University of Thrace, School of Medicine, Dragana, Alexandroupolis, Greece.

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April 2020

Analysis of Haplotypic Variation and Deletion Polymorphisms Point to Multiple Archaic Introgression Events, Including from Altai Neanderthal Lineage.

Genetics 2020 Jun 31;215(2):497-509. Epub 2020 Mar 31.

Department of Biological Sciences, State University of New York at Buffalo, New York 14260

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June 2020

Detecting Positive Selection in Populations Using Genetic Data.

Methods Mol Biol 2020 ;2090:87-123

Institute of Computer Science, Foundation for Research and Technology Hellas, Heraklion, Greece.

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January 2020

Intraspecific diversification of the crop wild relative Brassica cretica Lam. using demographic model selection.

BMC Genomics 2020 Jan 14;21(1):48. Epub 2020 Jan 14.

Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, 70013, Crete, Greece.

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January 2020

Transcriptome reprogramming and myeloid skewing in haematopoietic stem and progenitor cells in systemic lupus erythematosus.

Ann Rheum Dis 2020 02 28;79(2):242-253. Epub 2019 Nov 28.

4th Department of Internal Medicine, Attikon University Hospital and Joint Rheumatology Program, National and Kapodestrian University of Athens, Athens, Greece

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February 2020

Phylogenomics investigation of sparids (Teleostei: Spariformes) using high-quality proteomes highlights the importance of taxon sampling.

Commun Biol 2019 1;2:400. Epub 2019 Nov 1.

1Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Heraklion, Greece.

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April 2020

Foreign Bodies in the Abdominal Area: Review of the Literature.

Acta Medica (Hradec Kralove) 2019 ;62(3):85-93

Laboratory of Forensic Sciences, Democritus University of Thrace, School of Medicine, GR 68100 Dragana, Alexandroupolis, Greece.

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April 2020

Greek land borders and migration fatalities - Humanitarian disaster described from the standpoint of Evros.

Forensic Sci Int 2019 Sep 27;302:109875. Epub 2019 Jul 27.

Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace, Dragana, Alexandroupolis 68100, Evros Prefecture, Greece.

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September 2019

In fear of the most loved ones. A comprehensive review on Capgras misidentification phenomenon and case report involving attempted murder under Capgras syndrome in a relapse of a schizophrenia spectrum disorder.

J Forensic Leg Med 2019 Aug 31;66:8-24. Epub 2019 May 31.

Laboratory of Forensic Sciences, Democritus University of Thrace, School of Medicine, GR 68100, Dragana, Alexandroupolis, Greece. Electronic address:

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August 2019

A retrospective statistical review of deaths owing to migration through the southeasternmost land borders of the European Union, Greece 2000-14.

Disasters 2019 Jul 20;43(3):459-477. Epub 2019 May 20.

Doctoral Student, School of Medicine, Democritus University of Thrace, Greece.

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July 2019

Independent amylase gene copy number bursts correlate with dietary preferences in mammals.

Elife 2019 05 14;8. Epub 2019 May 14.

Department of Biological Sciences, University at Buffalo, The State University of New York, New York, United States.

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May 2019

RAiSD detects positive selection based on multiple signatures of a selective sweep and SNP vectors.

Commun Biol 2018 27;1:79. Epub 2018 Jun 27.

Institute of Computer Science, Foundation for Research and Technology-Hellas, Nikolaou Plastira 100, 70013, Heraklion, Crete, Greece.

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June 2018

Bilateral taste disorders in patients with Ramsay Hunt syndrome and Bell palsy.

Ann Neurol 2018 04 10;83(4):807-815. Epub 2018 Apr 10.

Department of Otorhinolaryngology, Medical Center of the University of Mainz, Mainz, Germany.

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April 2018

Bilateral taste disorders in patients with Ramsay Hunt syndrome and Bell palsy.

Ann Neurol 2018 04 10;83(4):807-815. Epub 2018 Apr 10.

Department of Otorhinolaryngology, Medical Center of the University of Mainz, Mainz, Germany.

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April 2018

Bilateral taste disorders in patients with Ramsay Hunt syndrome and Bell palsy.

Ann Neurol 2018 04 10;83(4):807-815. Epub 2018 Apr 10.

Department of Otorhinolaryngology, Medical Center of the University of Mainz, Mainz, Germany.

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April 2018

An Unusual Case Report of Bertolotti's Syndrome: Extraforaminal Stenosis and L5 Unilateral Root Compression (Castellvi Type III an LSTV).

J Orthop Case Rep 2017 May-Jun;7(3):9-12

Laboratory of Forensic Sciences, Medical School, Democritus University of Thrace, Alexandroupolis, Greece.

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October 2017

Archaic Hominin Introgression in Africa Contributes to Functional Salivary MUC7 Genetic Variation.

Mol Biol Evol 2017 10;34(10):2704-2715

Department of Biological Sciences, University at Buffalo, The State University of New York, Buffalo, NY.

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October 2017

VCFtoTree: a user-friendly tool to construct locus-specific alignments and phylogenies from thousands of anthropologically relevant genome sequences.

BMC Bioinformatics 2017 Sep 26;18(1):426. Epub 2017 Sep 26.

Department of Biological Sciences, State University of New York at Buffalo, New York, 14260, USA.

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September 2017

Prepartum Psychosis and Neonaticide: Rare Case Study and Forensic-Psychiatric Synthesis of Literature.

J Forensic Sci 2017 Jul 5;62(4):1097-1106. Epub 2017 Jun 5.

Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace, GR 68100, Alexandroupolis, Greece.

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July 2017

Death due to fracture of thin calvarial bones after a fall: A forensic approach.

Chin J Traumatol 2017 Jun 16;20(3):180-182. Epub 2017 Mar 16.

Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace, Dragana, GR 68100, Alexandroupolis, Greece. Electronic address:

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June 2017

A survey of methods and tools to detect recent and strong positive selection.

J Biol Res (Thessalon) 2017 Dec 8;24. Epub 2017 Apr 8.

Institute of Computer Science, Foundation for Research and Technology-Hellas, 70013 Crete, Greece.

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December 2017

Sexual homicide: Brief review of the literature and case report involving rape, genital mutilation and human arson.

J Forensic Leg Med 2017 Feb 20;46:1-10. Epub 2016 Dec 20.

Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace, GR 68100, Alexandroupolis, Greece. Electronic address:

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February 2017

Transforaminal Percutaneous Endoscopic Discectomy in Parkinson Disease: Preliminary Results and Short Review of the Literature.

Korean J Spine 2016 Sep 30;13(3):144-150. Epub 2016 Sep 30.

Department of Orthopaedic Surgery, University Hospital of Alexandroupolis, Medical School, Democritus University of Thrace, Alexandroupolis, Greece.

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September 2016

Traumatic Brain Injury Due to Screwdriver Assaults: Literature Review and Case Report.

Am J Forensic Med Pathol 2016 Dec;37(4):291-298

From the *Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace; and †Department of Neurosurgery, University Hospital of Alexandroupolis, Dragana, Alexandroupolis, Evros Prefecture, Greece.

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December 2016

Recent evolution of the salivary mucin MUC7.

Sci Rep 2016 08 25;6:31791. Epub 2016 Aug 25.

Department of Biological Sciences, State University of New York at Buffalo, New York 14260, USA.

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August 2016

Brachial branches of the medial antebrachial cutaneous nerve: A case report with its clinical significance and a short review of the literature.

J Neurosci Rural Pract 2016 Jul-Sep;7(3):443-6

Department of Anatomy, Medical School of Alexandroupolis, Democritus University of Thrace, 68100 Alexandroupolis, Greece.

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July 2016

Brachial branches of the medial antebrachial cutaneous nerve: A case report with its clinical significance and a short review of the literature.

J Neurosci Rural Pract 2016 Jul-Sep;7(3):443-6

Department of Anatomy, Medical School of Alexandroupolis, Democritus University of Thrace, 68100 Alexandroupolis, Greece.

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July 2016

Can Severe Kyphoscoliosis Lead to Aorta Rupture?

Am J Forensic Med Pathol 2016 Sep;37(3):205-7

From the *Department of Anatomy and *Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace, Dragana, Alexandroupolis, Greece.

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September 2016

Fatal accident due to anti-personnel ARGES EM01 rifle grenade explosion.

Chin J Traumatol 2016 Jun;19(3):136-8

Laboratory of Forensic Sciences, Medical School, Democritus University of Thrace, Dragana, GR 68100, Alexandroupolis, Evros Prefecture, Greece.

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June 2016

Isolated polycystic liver disease and aneurism: a case report.

Ann Transl Med 2016 May;4(9):167

1 Department of Angiology, "Saint Luke" Private Hospital, Thessaloniki, Greece ; 2 Pulmonary Department-Oncology Unit, "G. Papanikolaou" General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece ; 3 Surgery Department, University General Hospital of Alexandroupolis, Democritus University of Thrace, Alexandroupolis, Greece ; 4 Obstetric - Gynecology Department, "Thriassio" General Hospital of Athens, George Genimata, Athens, Greece ; 5 Forensic Medicine Department, University General Hospital of Alexandroupolis, Democritus University of Thrace, Alexandroupolis, Greece ; 6 Department of Anatomy, Democritus University of Thrace, Alexandroupolis, Greece ; 7 Thoracic surgical department "St. Loukas", Thessaloniki, Greece.

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May 2016

Thoracic duct cyst of posterior mediastinum: a "challenging" differential diagnosis.

Ann Transl Med 2016 May;4(9):166

1 "Microdiagnostics" Ltd., Thessaloniki, Greece ; 2 Pulmonary Department-Oncology Unit, "G. Papanikolaou" General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece ; 3 Surgery Department, University General Hospital of Alexandroupolis, Democritus University of Thrace, Alexandroupolis, Greece ; 4 Obstetric - Gynecology Department, "Thriassio" General Hospital of Athens, George Genimata, Athens, Greece ; 5 Department of Anatomy, Democritus University of Thrace, Alexandroupolis, Greece ; 6 Department of Angiology, "St. Loukas" Private Hospital, Thessaloniki, Greece ; 7 Thoracic Surgery Department, "Theageneio" Anticancer Hospital, Thessaloniki, Greece ; 8 Forensic Medicine Department, University General Hospital of Alexandroupolis, Democritus University of Thrace, Alexandroupolis, Greece ; 9 Thoracic Surgical Department "St. Loukas", Thessaloniki, Greece.

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May 2016

Prognostic factors for long term survival in patients with advanced non-small cell lung cancer.

Ann Transl Med 2016 May;4(9):161

1 Pulmonary Department-Oncology Unit, "G. Papanikolaou" General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece ; 2 Medical Clinic I, "Fuerth'' Hospital, University of Erlangen, Fuerth, Germany ; 3 Nuclear Medicine Department, University General Hospital of Alexandroupolis, Democritus University of Thrace, Alexandroupolis, Greece ; 4 Oncology Department, "G. Papageorgiou" University Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece ; 5 Thoracic Surgery Department, "Theageneio" Anticancer Hospital, Thessaloniki, Greece ; 6 Forensic Medicine Department, University General Hospital of Alexandroupolis, Democritus University of Thrace, Alexandroupolis, Greece.

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May 2016

A Retrospective Demographic and Clinicopathologic Review of Deaths Resulting from Minefield Explosions During Migrants' Attempts to Enter Greece from Turkey Between 1997 and 2008.

J Forensic Sci 2016 05 25;61(3):656-60. Epub 2016 Feb 25.

Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace, Alexandroupolis, GR 68100, Greece.

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May 2016

Infantile Respiratory Distress Syndrome and Its Probable Links With Parameters of the Maternal Patient History: A Forensic Case Report.

Am J Forensic Med Pathol 2016 Jun;37(2):67-9

From the *School of Medicine, Faculty of Health Sciences, and †Laboratory of Forensic Medicine and Toxicology, Medical School, Aristotle University of Thessaloniki, Thessaloniki; and ‡Laboratory of Forensic Medicine, Medical School, Democritus University of Thrace, Komotini, Greece.

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June 2016

Intravenous Heroin Abuse and Acute Myocardial Infarction: Forensic Study.

Am J Forensic Med Pathol 2016 Jun;37(2):95-8

From the Laboratories of *Forensic Sciences, †Histology-Embryology, ‡Nuclear Medicine, and §Physiology, School of Medicine, Democritus University of Thrace, Alexandroupolis, Greece.

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June 2016

Scalable linkage-disequilibrium-based selective sweep detection: a performance guide.

Gigascience 2016 8;5. Epub 2016 Feb 8.

Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Crete, 70013 Greece.

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October 2016

Evidence of deregulated cholesterol efflux in abdominal aortic aneurysm.

Acta Histochem 2016 Mar 23;118(2):97-108. Epub 2015 Dec 23.

University of Thessaly, Faculty of Medicine, Department of Cytogenetics and Molecular Genetics, Biopolis, Larissa 41100, Greece; University of Thessaly, Faculty of Medicine, Department of Biology, Biopolis, Larissa 41100, Greece. Electronic address:

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March 2016

The simultaneous death of seven people due to the detonation of an antipersonnel landmine at the land borders of the European Union during peacetime.

Am J Disaster Med 2015 ;10(2):167-72

Laboratory of Forensic Sciences, School of Medicine, Democritus University of Thrace, Alexandroupolis, Greece.

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November 2015

The evolution and functional impact of human deletion variants shared with archaic hominin genomes.

Mol Biol Evol 2015 Apr 2;32(4):1008-19. Epub 2015 Jan 2.

Department of Biological Sciences, State University of New York at Buffalo, NY, US

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April 2015

Changes in electrogustometry thresholds, tongue tip vascularization, density and form of the fungiform papillae in smokers.

Eur Arch Otorhinolaryngol 2014 Aug 17;271(8):2325-31. Epub 2014 Mar 17.

ENT Department, Katholisches Klinikum, Rudolf-Virchow-Str.7, 56073, Koblenz, Germany,

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August 2014

1000 Genomes Selection Browser 1.0: a genome browser dedicated to signatures of natural selection in modern humans.

Nucleic Acids Res 2014 Jan 25;42(Database issue):D903-9. Epub 2013 Nov 25.

Program for Population Genetics, Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), 08003 Barcelona, Spain, Population Genomics Node, National Institute for Bioinformatics (INB), Universitat Pompeu Fabra, 08003 Barcelona, Spain, Institute of Molecular Biology and Biotechnology-FORTH, Heraklion, Crete GR 700 13, Greece and Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany.

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January 2014

A general species delimitation method with applications to phylogenetic placements.

Bioinformatics 2013 Nov 29;29(22):2869-76. Epub 2013 Aug 29.

The Exelixis Lab, Scientific Computing Group, Heidelberg Institute for Theoretical Studies, D-68159 Heidelberg, Germany, Graduate School for Computing in Medicine and Life Sciences, University of Lübeck, Institut für Neuro- und Bioinformatik, University of Lübeck, 23538 Lübeck, Germany, Natural History Museum of Crete, University of Crete, GR-71409 Irakleio, Crete, Greece and Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas-FORTH, GR-70013 Heraklion, Crete, Greece.

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November 2013

Memantine's action against aminoglycoside-induced ototoxicity.

Eur Arch Otorhinolaryngol 2014 Jun 6;271(6):1491-6. Epub 2013 Aug 6.

ENT Department, Katholisches Klinikum, Rudolf-Virchow-Str.7, 56073, Koblenz, Germany,

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June 2014

SweeD: likelihood-based detection of selective sweeps in thousands of genomes.

Mol Biol Evol 2013 Sep 18;30(9):2224-34. Epub 2013 Jun 18.

Exelixis Lab, Scientific Computing Group, Heidelberg Institute for Theoretical Studies (HITS gGmbH), Schloss-Wolfsbrunnenweg, Heidelberg, Germany.

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September 2013

Selective sweep in the Flotillin-2 region of European Drosophila melanogaster.

PLoS One 2013 21;8(2):e56629. Epub 2013 Feb 21.

Section of Evolutionary Biology, Department of Biology II, University of Munich, Planegg-Martinsried, Germany.

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September 2013

Selective sweeps in multilocus models of quantitative traits.

Genetics 2012 Sep 19;192(1):225-39. Epub 2012 Jun 19.

Department of Biology II, Ludwig-Maximilians-University Munich, 82152 Planegg, Germany.

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September 2012

A critical assessment of storytelling: gene ontology categories and the importance of validating genomic scans.

Mol Biol Evol 2012 Oct 21;29(10):3237-48. Epub 2012 May 21.

The Exelixis Lab, Scientific Computing Group, Heidelberg Institute for Theoretical Studies (HITS gGmbH), Heidelberg, Germany.

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October 2012

Selective sweep of a cis-regulatory sequence in a non-African population of Drosophila melanogaster.

Mol Biol Evol 2012 Apr 18;29(4):1167-74. Epub 2011 Nov 18.

Department of Biology II, University of Munich, Planegg-Martinsried, Germany.

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April 2012

Inference of seed bank parameters in two wild tomato species using ecological and genetic data.

Proc Natl Acad Sci U S A 2011 Oct 26;108(41):17052-7. Epub 2011 Sep 26.

Section of Evolutionary Biology, Department of Biology II, University of Munich LMU, 82152 Planegg-Martinsried, Germany.

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October 2011

Myocardial hypertrophy induces carotid body hyperplasia.

J Forensic Sci 2011 Jan 15;56 Suppl 1:S90-4. Epub 2010 Oct 15.

Department of Pathology, Democritus University of Thrace, University General Hospital of Alexandroupolis, Greece.

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January 2011

Searching for footprints of positive selection in whole-genome SNP data from nonequilibrium populations.

Genetics 2010 Jul 20;185(3):907-22. Epub 2010 Apr 20.

Department of Biology II, Ludwig-Maximilians-University Munich, 82152 Planegg, Germany.

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July 2010

Evolution of self-compatibility in Arabidopsis by a mutation in the male specificity gene.

Nature 2010 Apr 18;464(7293):1342-6. Epub 2010 Apr 18.

Institute of Plant Biology, University Research Priority Program in Systems Biology/Functional Genomics & Zürich-Basel Plant Science Center, University of Zurich, Zollikerstrasse 107, CH-8008 Zurich, Switzerland.

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April 2010

Sudden death after myocardial infarction in a high-school athlete.

J Forensic Sci 2010 Sep;55(5):1378-9

Department of Pathology, Democritus University of Thrace, Medical School, Alexandroupolis, Greece.

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September 2010

Reversible dilated cardiomyopathy due to subclinical hyperthyroidism.

Hellenic J Cardiol 2010 Jan-Feb;51(1):67-70

2nd Department of Cardiology, Amalia Fleming General Hospital, Athens, Greece.

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May 2010

Ototoxicity caused by once- and twice-daily administration of amikacin in rabbits.

Int J Pediatr Otorhinolaryngol 2010 Apr 20;74(4):361-4. Epub 2010 Jan 20.

2nd Department of Otolaryngology, Aristotle University, Papageorgiou G.H., Thessaloniki, Greece.

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April 2010

Meta-coexpression conservation analysis of microarray data: a "subset" approach provides insight into brain-derived neurotrophic factor regulation.

BMC Genomics 2009 Sep 8;10:420. Epub 2009 Sep 8.

Department of Gene Technology, Tallinn University of Technology, Akadeemia tee 15, 19086 Tallinn, Estonia.

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September 2009

Evaluation of young smokers and non-smokers with Electrogustometry and Contact Endoscopy.

BMC Ear Nose Throat Disord 2009 Aug 20;9. Epub 2009 Aug 20.

2nd ENT Department of Aristotle University of Thessaloniki, Thessaloniki, Greece.

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August 2009

Recent strong positive selection on Drosophila melanogaster HDAC6, a gene encoding a stress surveillance factor, as revealed by population genomic analysis.

Mol Biol Evol 2009 Jul 6;26(7):1549-56. Epub 2009 Apr 6.

Department of Biology, Section of Evolutionary Biology, LMU BioCenter, Planegg-Martinsried, Germany.

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July 2009

Potential efficacy of early treatment of acute acoustic trauma with steroids and piracetam after gunshot noise.

Eur Arch Otorhinolaryngol 2008 Dec 8;265(12):1465-9. Epub 2008 May 8.

1st Academic ENT Department, Aristotle University of Thessaloniki, AHEPA Hospital 1, Stilponos Kyriakidi St., 540 06, Thessaloniki, Greece.

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December 2008

Individualized markers optimize class prediction of microarray data.

BMC Bioinformatics 2006 Jul 14;7:345. Epub 2006 Jul 14.

Institute of Molecular Biology and Biotechnology (IMBB), Foundation for Research and Technology-Hellas (FORTH), Vassilika Vouton PO Box 1385, GR-71110, Heraklion, Crete, Greece.

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July 2006