Publications by authors named "Paul van Hummelen"

93Publications

ViroPanel: Hybrid Capture and Massively Parallel Sequencing for Simultaneous Detection and Profiling of Oncogenic Virus Infection and Tumor Genome.

J Mol Diagn 2020 04 15;22(4):476-487. Epub 2020 Feb 15.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts; Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2019.12.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7193840PMC
April 2020

Vemurafenib-resistance via de novo RBM genes mutations and chromosome 5 aberrations is overcome by combined therapy with palbociclib in thyroid carcinoma with BRAF.

Oncotarget 2017 Oct 24;8(49):84743-84760. Epub 2017 Sep 24.

Laboratory of human thyroid cancers preclinical and translational research, Division of Experimental Pathology, Cancer Research Institute, Cancer Center, Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.

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http://dx.doi.org/10.18632/oncotarget.21262DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5689570PMC
October 2017

The Public Repository of Xenografts Enables Discovery and Randomized Phase II-like Trials in Mice.

Authors:
Elizabeth C Townsend Mark A Murakami Alexandra Christodoulou Amanda L Christie Johannes Köster Tiffany A DeSouza Elizabeth A Morgan Scott P Kallgren Huiyun Liu Shuo-Chieh Wu Olivia Plana Joan Montero Kristen E Stevenson Prakash Rao Raga Vadhi Michael Andreeff Philippe Armand Karen K Ballen Patrizia Barzaghi-Rinaudo Sarah Cahill Rachael A Clark Vesselina G Cooke Matthew S Davids Daniel J DeAngelo David M Dorfman Hilary Eaton Benjamin L Ebert Julia Etchin Brant Firestone David C Fisher Arnold S Freedman Ilene A Galinsky Hui Gao Jacqueline S Garcia Francine Garnache-Ottou Timothy A Graubert Alejandro Gutierrez Ensar Halilovic Marian H Harris Zachary T Herbert Steven M Horwitz Giorgio Inghirami Andrew M Intlekofer Moriko Ito Shai Izraeli Eric D Jacobsen Caron A Jacobson Sébastien Jeay Irmela Jeremias Michelle A Kelliher Raphael Koch Marina Konopleva Nadja Kopp Steven M Kornblau Andrew L Kung Thomas S Kupper Nicole R LeBoeuf Ann S LaCasce Emma Lees Loretta S Li A Thomas Look Masato Murakami Markus Muschen Donna Neuberg Samuel Y Ng Oreofe O Odejide Stuart H Orkin Rachel R Paquette Andrew E Place Justine E Roderick Jeremy A Ryan Stephen E Sallan Brent Shoji Lewis B Silverman Robert J Soiffer David P Steensma Kimberly Stegmaier Richard M Stone Jerome Tamburini Aaron R Thorner Paul van Hummelen Martha Wadleigh Marion Wiesmann Andrew P Weng Jens U Wuerthner David A Williams Bruce M Wollison Andrew A Lane Anthony Letai Monica M Bertagnolli Jerome Ritz Myles Brown Henry Long Jon C Aster Margaret A Shipp James D Griffin David M Weinstock

Cancer Cell 2016 07 11;30(1):183. Epub 2016 Jul 11.

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http://dx.doi.org/10.1016/j.ccell.2016.06.008DOI Listing
July 2016

The Public Repository of Xenografts Enables Discovery and Randomized Phase II-like Trials in Mice.

Authors:
Elizabeth C Townsend Mark A Murakami Alexandra Christodoulou Amanda L Christie Johannes Köster Tiffany A DeSouza Elizabeth A Morgan Scott P Kallgren Huiyun Liu Shuo-Chieh Wu Olivia Plana Joan Montero Kristen E Stevenson Prakash Rao Raga Vadhi Michael Andreeff Philippe Armand Karen K Ballen Patrizia Barzaghi-Rinaudo Sarah Cahill Rachael A Clark Vesselina G Cooke Matthew S Davids Daniel J DeAngelo David M Dorfman Hilary Eaton Benjamin L Ebert Julia Etchin Brant Firestone David C Fisher Arnold S Freedman Ilene A Galinsky Hui Gao Jacqueline S Garcia Francine Garnache-Ottou Timothy A Graubert Alejandro Gutierrez Ensar Halilovic Marian H Harris Zachary T Herbert Steven M Horwitz Giorgio Inghirami Andrew M Intlekofer Moriko Ito Shai Izraeli Eric D Jacobsen Caron A Jacobson Sébastien Jeay Irmela Jeremias Michelle A Kelliher Raphael Koch Marina Konopleva Nadja Kopp Steven M Kornblau Andrew L Kung Thomas S Kupper Nicole R LeBoeuf Ann S LaCasce Emma Lees Loretta S Li A Thomas Look Masato Murakami Markus Muschen Donna Neuberg Samuel Y Ng Oreofe O Odejide Stuart H Orkin Rachel R Paquette Andrew E Place Justine E Roderick Jeremy A Ryan Stephen E Sallan Brent Shoji Lewis B Silverman Robert J Soiffer David P Steensma Kimberly Stegmaier Richard M Stone Jerome Tamburini Aaron R Thorner Paul van Hummelen Martha Wadleigh Marion Wiesmann Andrew P Weng Jens U Wuerthner David A Williams Bruce M Wollison Andrew A Lane Anthony Letai Monica M Bertagnolli Jerome Ritz Myles Brown Henry Long Jon C Aster Margaret A Shipp James D Griffin David M Weinstock

Cancer Cell 2016 04;29(4):574-586

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, 450 Brookline Avenue, Dana 510B, MA 02215, USA; Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2016.03.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5177991PMC
April 2016

Oncogenic PI3K mutations are as common as AKT1 and SMO mutations in meningioma.

Neuro Oncol 2016 05 28;18(5):649-55. Epub 2016 Jan 28.

Department of Pathology, Brigham and Women's Hospital, Boston, Massachusetts (M.A., P.H.M., R.B., M.L.L., S.H.R., R.D.F., K.L.L., A.H.L., S.S.); Department of Pathology, King Fahad Medical City, Riyadh, Saudi Arabia (M.A.); King Abdulaziz City for Science and Technology, Riyadh, Saudi Arabia (M.A.); Harvard Medical School, Boston, Massachusetts (M.A., A.A.A., D.D.-S., P.K.B., D.A.R., P.Y.W., O.A.-M., S.H.R., R.D.F., K.L.L., A.H.L., B.M.A., I.F.D., R.B., S.S.); Department of Neurosurgery, Brigham and Women's Hospital, Boston, Massachusetts (W.L.B., O.A.-M., I.F.D.); Department of Radiation Oncology, Brigham and Women's Hospital, Boston, Massachusetts (A.A.A., B.M.A.); Department of Neurosurgery, Massachusetts General Hospital, Boston, Massachusetts (P.K.A.); Department of Pathology, Massachusetts General Hospital, Boston, Massachusetts (D.D.-S.); Center for Cancer Genomic Discovery, Dana-Farber Cancer Institute, Boston, Massachusetts (A.R.T., P.V.H.); Department of Neuro-Oncology, Massachusetts General Hospital, Boston, Massachusetts (P.K.B.); Center of Neuro-Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts (D.A.R., P.Y.W, R.B.); Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts (K.L.L., R.B.); Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA (S.S.).

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http://dx.doi.org/10.1093/neuonc/nov316DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4827048PMC
May 2016

Metastasis-associated MCL1 and P16 copy number alterations dictate resistance to vemurafenib in a BRAFV600E patient-derived papillary thyroid carcinoma preclinical model.

Oncotarget 2015 Dec;6(40):42445-67

Laboratory of Human Thyroid Cancers Preclinical and Translational Research, Division of Cancer Biology and Angiogenesis, Cancer Research Institute (CRI), Cancer Center, Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.

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http://dx.doi.org/10.18632/oncotarget.6442DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4767444PMC
December 2015

MAP2K1 and MAP3K1 mutations in Langerhans cell histiocytosis.

Genes Chromosomes Cancer 2015 Jun 31;54(6):361-8. Epub 2015 Mar 31.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.

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http://dx.doi.org/10.1002/gcc.22247DOI Listing
June 2015

BreaKmer: detection of structural variation in targeted massively parallel sequencing data using kmers.

Nucleic Acids Res 2015 Feb 26;43(3):e19. Epub 2014 Nov 26.

Center for Cancer Genome Discovery and Department of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA 02215, USA Department of Pathology, Brigham and Women's Hospital, Boston, MA 02215, USA

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http://dx.doi.org/10.1093/nar/gku1211DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4330340PMC
February 2015

Src mutation induces acquired lapatinib resistance in ERBB2-amplified human gastroesophageal adenocarcinoma models.

PLoS One 2014 28;9(10):e109440. Epub 2014 Oct 28.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America; Cancer Program, The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America; Department of Medicine, Harvard Medical School, Boston, Massachusetts, United States of America; Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0109440PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4211679PMC
June 2015

Analysis and comparison of somatic mutations in paired primary and recurrent epithelial ovarian cancer samples.

PLoS One 2014 17;9(6):e99451. Epub 2014 Jun 17.

Department of Pathology, University of Ulsan, ASAN Medical Center, Seoul, Korea; ASAN Center for Cancer Genome Discovery, ASAN Medical Center, Seoul, Korea.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0099451PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4060993PMC
February 2015

Somatic activating ARAF mutations in Langerhans cell histiocytosis.

Blood 2014 May 20;123(20):3152-5. Epub 2014 Mar 20.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA; Department of Medicine, Brigham & Women's Hospital and Harvard Medical School, Boston, MA;

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http://dx.doi.org/10.1182/blood-2013-06-511139DOI Listing
May 2014

Exome sequencing identifies BRAF mutations in papillary craniopharyngiomas.

Nat Genet 2014 Feb 12;46(2):161-5. Epub 2014 Jan 12.

1] Harvard Medical School, Boston, Massachusetts, USA. [2] Department of Pathology, Boston Children's Hospital, Boston, Massachusetts, USA. [3] Department of Pathology, Brigham and Women's Hospital, Boston, Massachusetts, USA. [4] Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. [5].

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http://dx.doi.org/10.1038/ng.2868DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3982316PMC
February 2014

Canonical nucleosome organization at promoters forms during genome activation.

Genome Res 2014 Feb 27;24(2):260-6. Epub 2013 Nov 27.

School of Life Science and Technology, Tongji University, Shanghai 200092, China;

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http://dx.doi.org/10.1101/gr.157750.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3912416PMC
February 2014

Colorectal cancers from distinct ancestral populations show variations in BRAF mutation frequency.

PLoS One 2013 16;8(9):e74950. Epub 2013 Sep 16.

Center for Cancer Genome Discovery, Dana-Farber Cancer Institute and Harvard Medical School, Boston, Massachusetts, United States of America ; Department of Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, Massachusetts, United States of America ; The Broad Institute, Cambridge, Massachusetts, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0074950PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774610PMC
May 2014

Oncogenic mutations in cervical cancer: genomic differences between adenocarcinomas and squamous cell carcinomas of the cervix.

Cancer 2013 Nov 23;119(21):3776-83. Epub 2013 Aug 23.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts; Harvard Medical School, Boston, Massachusetts; Centers for Outcomes and Policy Research and Psychosocial Epidemiology and Outcomes Research, Dana-Farber Cancer Institute, Boston, Massachusetts.

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http://dx.doi.org/10.1002/cncr.28288DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3972000PMC
November 2013

Mutations in Hedgehog pathway genes in fetal rhabdomyomas.

J Pathol 2013 Sep;231(1):44-52

Howard Hughes Medical Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Harvard Stem Cell Institute, Cambridge, MA, USA.

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http://dx.doi.org/10.1002/path.4229DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3875333PMC
September 2013

Hard-metal (WC-Co) particles trigger a signaling cascade involving p38 MAPK, HIF-1α, HMOX1, and p53 activation in human PBMC.

Arch Toxicol 2013 Feb 28;87(2):259-68. Epub 2012 Sep 28.

Laboratorium voor Cellulaire Genetica, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussel, Belgium.

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http://link.springer.com/10.1007/s00204-012-0943-y
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http://dx.doi.org/10.1007/s00204-012-0943-yDOI Listing
February 2013

High throughput mass spectrometry-based mutation profiling of primary uveal melanoma.

Invest Ophthalmol Vis Sci 2012 Oct 9;53(11):6991-6. Epub 2012 Oct 9.

Massachusetts Eye and Ear Infirmary, Department of Ophthalmology, Harvard Medical School, Boston, Massachusetts 02114-3096, USA.

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http://dx.doi.org/10.1167/iovs.12-10427DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471553PMC
October 2012

Clinical implementation of comprehensive strategies to characterize cancer genomes: opportunities and challenges.

Cancer Discov 2011 Sep;1(4):297-311

Center for Cancer Genome Discovery, Dana-Farber Cancer Institute and Harvard Medical School, Boston, Massachusetts 02215, USA.

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http://dx.doi.org/10.1158/2159-8290.CD-11-0110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3175123PMC
September 2011

Metatranscriptome analysis for insight into whole-ecosystem gene expression during spontaneous wheat and spelt sourdough fermentations.

Appl Environ Microbiol 2011 Jan 19;77(2):618-26. Epub 2010 Nov 19.

Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bio-engineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussels, Belgium.

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http://aem.asm.org/content/77/2/618.full.pdf
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http://aem.asm.org/cgi/doi/10.1128/AEM.02028-10
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http://dx.doi.org/10.1128/AEM.02028-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3020550PMC
January 2011

Community dynamics of bacteria in sourdough fermentations as revealed by their metatranscriptome.

Appl Environ Microbiol 2010 Aug 25;76(16):5402-8. Epub 2010 Jun 25.

Research Group of Industrial Microbiology and Food Biotechnology (IMDO), Faculty of Sciences and Bio-engineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, Brussels, Belgium.

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http://dx.doi.org/10.1128/AEM.00570-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2918950PMC
August 2010

State-of-the-art genomics approaches in toxicology.

Mutat Res 2010 Dec 11;705(3):165-71. Epub 2010 May 11.

MicroArray Facility, VIB, Herestraat 18, 3000 Leuven, Belgium.

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http://dx.doi.org/10.1016/j.mrrev.2010.04.007DOI Listing
December 2010

Development and validation of a species-independent functional gene microarray that targets lactic acid bacteria.

Appl Environ Microbiol 2009 Oct 14;75(20):6488-95. Epub 2009 Aug 14.

Research Group of Industrial Microbiology and Food Biotechnology (IMDO), Faculty of Sciences and Bio-engineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussels, Belgium.

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http://dx.doi.org/10.1128/AEM.01055-09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2765132PMC
October 2009

Early genomic responses to salicylic acid in Arabidopsis.

Plant Mol Biol 2009 May 7;70(1-2):79-102. Epub 2009 Feb 7.

Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, P.O. Box 114-D, Santiago, Chile.

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http://www.springerlink.com/index/2537282m46744152.pdf
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http://link.springer.com/content/pdf/10.1007/s11103-009-9458
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http://link.springer.com/10.1007/s11103-009-9458-1
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http://dx.doi.org/10.1007/s11103-009-9458-1DOI Listing
May 2009

Thermodynamic scaling behavior in genechips.

BMC Bioinformatics 2009 Jan 6;10. Epub 2009 Jan 6.

Institute for Theoretical Physics, Katholieke Universiteit Leuven, Celestijnenlaan 200D, B-3000 Leuven, Belgium.

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http://dx.doi.org/10.1186/1471-2105-10-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2628882PMC
January 2009

Relapse-free survival in breast cancer patients is associated with a gene expression signature characteristic for inflammatory breast cancer.

Clin Cancer Res 2008 Nov;14(22):7452-60

Translational Cancer Research Group, Laboratory of Pathology, University of Antwerp and Oncology Center, General Hospital Sint-Augustinus, Wilrijk, Belgium.

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http://dx.doi.org/10.1158/1078-0432.CCR-08-1077DOI Listing
November 2008

Coordinate induction of PPAR alpha and SREBP2 in multifunctional protein 2 deficient mice.

Biochim Biophys Acta 2008 Nov-Dec;1781(11-12):694-702. Epub 2008 Aug 12.

Laboratory of Cell Metabolism, Department of Pharmaceutical Sciences, K.U. Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1016/j.bbalip.2008.07.010DOI Listing
February 2009

HNA and ANA high-affinity arrays for detections of DNA and RNA single-base mismatches.

Biosens Bioelectron 2008 Jun 13;23(11):1728-32. Epub 2008 Feb 13.

Laboratory for Medicinal Chemistry, Rega Institute for Medical Research, Minderbroedersstraat 10, 3000 Leuven, Belgium.

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http://dx.doi.org/10.1016/j.bios.2008.01.033DOI Listing
June 2008

In vitro expression of hard metal dust (WC-Co)--responsive genes in human peripheral blood mononucleated cells.

Toxicol Appl Pharmacol 2008 Mar 13;227(2):299-312. Epub 2007 Nov 13.

Vrije Universiteit Brussel, Laboratorium voor Cellulaire Genetica, Pleinlaan 2, B-1050 Brussel, Belgium.

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http://linkinghub.elsevier.com/retrieve/pii/S0041008X0700499
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http://dx.doi.org/10.1016/j.taap.2007.11.002DOI Listing
March 2008

Thermodynamic behavior of short oligonucleotides in microarray hybridizations can be described using Gibbs free energy in a nearest-neighbor model.

J Phys Chem B 2007 Dec 10;111(48):13583-90. Epub 2007 Nov 10.

MicroArray Facility, VIB, Herestraat 49, B-3000 Leuven, Belgium.

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http://dx.doi.org/10.1021/jp075197xDOI Listing
December 2007

Diffusion limitation: a possible source for the occurrence of doughnut patterns on DNA microarrays.

Biotechniques 2006 Nov;41(5):609-16

Department of Chemical Engineering, Transport Modeling & Bioanalytical Separation Science Group, Vrije Universiteit Brussels, Belgium.

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http://dx.doi.org/10.2144/000112293DOI Listing
November 2006

Effects of the antidepressant mianserin in zebrafish: molecular markers of endocrine disruption.

Chemosphere 2006 Dec 5;65(10):1836-45. Epub 2006 Jun 5.

Department of Biology, Laboratory of Ecophysiology, Biochemistry and Toxicology, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerp, Belgium.

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http://dx.doi.org/10.1016/j.chemosphere.2006.03.079DOI Listing
December 2006

Comparison of a pump-around, a diffusion-driven, and a shear-driven system for the hybridization of mouse lung and testis total RNA on microarrays.

Electrophoresis 2005 Oct;26(19):3773-9

Department of Chemical Engineering, Vrije Universiteit Brussel, Brussels, Belgium.

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http://dx.doi.org/10.1002/elps.200500097DOI Listing
October 2005

The effect of a sertoli cell-selective knockout of the androgen receptor on testicular gene expression in prepubertal mice.

Mol Endocrinol 2006 Feb 15;20(2):321-34. Epub 2005 Sep 15.

Laboratory for Experimental Medicine and Endocrinology, Catholic University of Leuven, Belgium.

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http://dx.doi.org/10.1210/me.2005-0113DOI Listing
February 2006

Genetic analysis of variation in gene expression in Arabidopsis thaliana.

Genetics 2005 Nov 14;171(3):1267-75. Epub 2005 Jul 14.

Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University, B-9052 Gent, Belgium.

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http://dx.doi.org/10.1534/genetics.105.041509DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1456830PMC
November 2005

DNA microarray enhancement using a continuously and discontinuously rotating microchamber.

Anal Chem 2005 Jul;77(14):4474-80

Department of Chemical Engineering, Vrije Universiteit Brussel, Brussels, Belgium, MicroArrayFacility Lab, Flemish Institute for Biotechnology (VIB), Leuven, Belgium.

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http://pubs.acs.org/doi/abs/10.1021/ac0502091
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http://dx.doi.org/10.1021/ac0502091DOI Listing
July 2005

Genome-wide analysis of gene expression profiles associated with cell cycle transitions in growing organs of Arabidopsis.

Plant Physiol 2005 Jun 29;138(2):734-43. Epub 2005 Apr 29.

Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University, B-9052 Ghent, Belgium.

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http://dx.doi.org/10.1104/pp.104.053884DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1150392PMC
June 2005

Old yellow enzyme interferes with Bax-induced NADPH loss and lipid peroxidation in yeast.

FEMS Yeast Res 2005 May;5(8):711-25

Unit of Fundamental and Applied Molecular Biology, Department for Molecular Biomedical Research, VIB-Ghent University, Technologiepark 927, B-9052 Zwijnaarde, Belgium.

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http://dx.doi.org/10.1016/j.femsyr.2004.12.010DOI Listing
May 2005

Experimental Charcot-Marie-Tooth type 1A: a cDNA microarrays analysis.

Mol Cell Neurosci 2005 Apr;28(4):703-14

Department of Neurosciences, Ophthalmology and Genetics, University of Genova, Italy, via De Toni 5, 16132 Genova, Italy.

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http://dx.doi.org/10.1016/j.mcn.2004.11.016DOI Listing
April 2005

Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis.

Plant J 2004 Aug;39(4):537-59

Unit Plant Hormone Signalling and Bio-imaging, Department of Molecular Genetics, Ghent University, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium.

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http://dx.doi.org/10.1111/j.1365-313X.2004.02156.xDOI Listing
August 2004

Cytokine-induced cell death in human oligodendroglial cell lines. II: Alterations in gene expression induced by interferon-gamma and tumor necrosis factor-alpha.

J Neurosci Res 2004 Jun;76(6):846-61

Biomedisch Onderzoeksinstituut, Limburgs Universitair Centrum and School of Life Sciences, Transnationale Universiteit Limburg, Universitaire Campus A, Diepenbeek, Belgium.

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http://doi.wiley.com/10.1002/jnr.20117
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http://dx.doi.org/10.1002/jnr.20117DOI Listing
June 2004

Microarray analysis of the effect of diesel exhaust particles on in vitro cultured macrophages.

Toxicol In Vitro 2004 Jun;18(3):377-91

Centre of Expertise in Environmental Toxicology, Flemish Institute for Technological Research (Vito), Boeretang 200, B-2400 Mol, Belgium.

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http://dx.doi.org/10.1016/j.tiv.2003.10.007DOI Listing
June 2004

The effects of 1alpha,25-dihydroxyvitamin D3 on the expression of DNA replication genes.

J Bone Miner Res 2004 Jan;19(1):133-46

Laboratorium voor Experimentele Geneeskunde en Endocrinologie, Katholieke Universiteit Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1359/JBMR.0301204DOI Listing
January 2004

Gene expression profile in thyroid of transgenic mice overexpressing the adenosine receptor 2a.

Mol Endocrinol 2004 Jan 16;18(1):194-213. Epub 2003 Oct 16.

Institut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Faculté de Médecine de l'Université Libre de Bruxelles, Belgium.

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http://dx.doi.org/10.1210/me.2003-0249DOI Listing
January 2004

Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation.

J Cell Sci 2003 Oct 2;116(Pt 20):4249-59. Epub 2003 Sep 2.

Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University, B-9052 Gent, Belgium.

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http://dx.doi.org/10.1242/jcs.00715DOI Listing
October 2003

Gene profiling of hippocampal neuronal culture.

J Neurochem 2003 Jun;85(5):1279-88

Laboratory for Neuronal Cell Biology, Center for Human Genetics, and Department of Electrical Engineering ESAT-SCD, Katholieke Universiteit Leuven and VIB (Flemish Interuniversity Institute for Biotechnology), Leuven, Belgium.

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http://dx.doi.org/10.1046/j.1471-4159.2003.01753.xDOI Listing
June 2003

NOVP chemotherapy for Hodgkin's disease transiently induces sperm aneuploidies associated with the major clinical aneuploidy syndromes involving chromosomes X, Y, 18, and 21.

Cancer Res 2003 Jan;63(1):44-51

Biology and Biotechnology Research Program, Lawrence Livermore National Laboratory, Livermore, California 94550, USA.

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January 2003

RNA amplification results in reproducible microarray data with slight ratio bias.

Biotechniques 2002 Jun;32(6):1330-4, 1336, 1338, 1340

Hungarian Academy of Sciences, Szeged.

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http://dx.doi.org/10.2144/02326mt04DOI Listing
June 2002

Recovery of cyanine-dye nucleotide triphosphates.

Anal Biochem 2002 Jun;305(2):279-81

DNA-Chip Laboratory, Hungarian Academy of Sciences, Szeged, H-6701, Hungary.

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http://dx.doi.org/10.1006/abio.2002.5640DOI Listing
June 2002