Paul M Kirk

Paul M Kirk

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Paul M Kirk

Paul M Kirk

Publications by authors named "Paul M Kirk"

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Protax-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences.

New Phytol 2018 10 23;220(2):517-525. Epub 2018 Jul 23.

Organismal and Evolutionary Biology Research Programme, University of Helsinki, PO Box 65, Helsinki, FI-00014, Finland.

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http://dx.doi.org/10.1111/nph.15301DOI Listing
October 2018

Explaining European fungal fruiting phenology with climate variability.

Ecology 2018 06 8;99(6):1306-1315. Epub 2018 May 8.

Section for Genetics and Evolutionary Biology (EVOGENE), University of Oslo, Blindernveien 31, 0316, Oslo, Norway.

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http://doi.wiley.com/10.1002/ecy.2237
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http://dx.doi.org/10.1002/ecy.2237DOI Listing
June 2018

Sequence-based nomenclature: a reply to Thines and Zamora and provisions for an amended proposal "from the floor" to allow DNA sequences as types of names.

IMA Fungus 2018 Jun 11;9(1):185-198. Epub 2018 Jun 11.

Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK; Department of Life Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK; Jilin Agricultural University, Chanchung, Jilin province, 130118 China.

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http://dx.doi.org/10.5598/imafungus.2018.09.01.12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048568PMC
June 2018

Beauveria medogensis sp. nov., a new fungus of the entomopathogenic genus from China.

J Invertebr Pathol 2016 09 19;139:74-81. Epub 2016 Jul 19.

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; Fujian Province Key Laboratory of Plant Virology, Institute of Plant Virology, Fujian Agricultural and Forest University, Fuzhou 350002, China; Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK. Electronic address:

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http://dx.doi.org/10.1016/j.jip.2016.07.006DOI Listing
September 2016

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Authors:
Conrad L Schoch Barbara Robbertse Vincent Robert Duong Vu Gianluigi Cardinali Laszlo Irinyi Wieland Meyer R Henrik Nilsson Karen Hughes Andrew N Miller Paul M Kirk Kessy Abarenkov M Catherine Aime Hiran A Ariyawansa Martin Bidartondo Teun Boekhout Bart Buyck Qing Cai Jie Chen Ana Crespo Pedro W Crous Ulrike Damm Z Wilhelm De Beer Bryn T M Dentinger Pradeep K Divakar Margarita Dueñas Nicolas Feau Katerina Fliegerova Miguel A García Zai-Wei Ge Gareth W Griffith Johannes Z Groenewald Marizeth Groenewald Martin Grube Marieka Gryzenhout Cécile Gueidan Liangdong Guo Sarah Hambleton Richard Hamelin Karen Hansen Valérie Hofstetter Seung-Beom Hong Jos Houbraken Kevin D Hyde Patrik Inderbitzin Peter R Johnston Samantha C Karunarathna Urmas Kõljalg Gábor M Kovács Ekaphan Kraichak Krisztina Krizsan Cletus P Kurtzman Karl-Henrik Larsson Steven Leavitt Peter M Letcher Kare Liimatainen Jian-Kui Liu D Jean Lodge Janet Jennifer Luangsa-ard H Thorsten Lumbsch Sajeewa S N Maharachchikumbura Dimuthu Manamgoda María P Martín Andrew M Minnis Jean-Marc Moncalvo Giuseppina Mulè Karen K Nakasone Tuula Niskanen Ibai Olariaga Tamás Papp Tamás Petkovits Raquel Pino-Bodas Martha J Powell Huzefa A Raja Dirk Redecker J M Sarmiento-Ramirez Keith A Seifert Bhushan Shrestha Soili Stenroos Benjamin Stielow Sung-Oui Suh Kazuaki Tanaka Leho Tedersoo M Teresa Telleria Dhanushka Udayanga Wendy A Untereiner Javier Diéguez Uribeondo Krishna V Subbarao Csaba Vágvölgyi Cobus Visagie Kerstin Voigt Donald M Walker Bevan S Weir Michael Weiß Nalin N Wijayawardene Michael J Wingfield J P Xu Zhu L Yang Ning Zhang Wen-Ying Zhuang Scott Federhen

Database (Oxford) 2014 30;2014. Epub 2014 Jun 30.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA, CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands, Department of Pharmaceutical Sciences - Microbiology, Università degli Studi di Perugia, Perugia, Italy, Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Westmead, Australia, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Göteborg, Sweden, Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37920, USA, Illinois Natural History Survey, University of Illinois, 1816 South Oak Street, Champaign, IL 61820, USA, Mycology Section, Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK, Natural History Museum, University of Tartu, 46 Vanemuise, 51014 Tartu, Estonia, Purdue University, Department of Botany and Plant Pathology, 915 W. State Street, West Lafayette, IN 47907, USA, Institute of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand, Imperial College London, Royal Botanic Gardens, Kew TW9 3DS, England, UK, Muséum National d'Histoire Naturelle, Dépt. Systématique et Evolution CP39, UMR7205, 12 Rue Buffon, F-75005 Paris, France, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, P. R. China, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain, Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany, Department of Microbiology and Plant Pathology, Forestry Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0001, South Africa, Real Jardín Botánico, RJB-CSIC,

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http://dx.doi.org/10.1093/database/bau061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4075928PMC
February 2015

Naming and outline of -2014 including proposals for the protection or suppression of generic names.

Fungal Divers 2014 Nov 4;69(1):1-55. Epub 2014 Nov 4.

Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, People's Republic of China; World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, People's Republic of China; Institute of Excellence in Fungal Research, Chiang Rai 57100, Thailand.

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http://dx.doi.org/10.1007/s13225-014-0309-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4896388PMC
November 2014

The amsterdam declaration on fungal nomenclature.

IMA Fungus 2011 Jun 7;2(1):105-12. Epub 2011 Jun 7.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Plaza Ramón y Cajal, E-28040 Madrid, Spain; and Department of Botany, Natural History Museum, Cromwell Road, London SW7 5BD, UK;

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http://dx.doi.org/10.5598/imafungus.2011.02.01.14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3317370PMC
June 2011

Recent developments in the taxonomic affiliation and phylogenetic positioning of fungi: impact in applied microbiology and environmental biotechnology.

Appl Microbiol Biotechnol 2011 Apr 20;90(1):41-57. Epub 2011 Feb 20.

School of Biology and Pharmacy, Institute of Microbiology, Department of Microbiology and Molecular Biology, Jena Microbial Resource Collection, University of Jena, Neugasse 25, 07743, Jena, Germany.

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http://dx.doi.org/10.1007/s00253-011-3143-4DOI Listing
April 2011

Fungal ecology catches fire.

New Phytol 2009 Oct;184(2):279-82

Biology Department, Clark University, Worcester, MA 01610, USA.

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http://dx.doi.org/10.1111/j.1469-8137.2009.03042.xDOI Listing
October 2009

Genetic similarity among Cercospora apii-group species and their detection in host plant tissue by PCR/RFLP analyses of the rDNA internal transcribed spacer (ITS).

J Gen Appl Microbiol 2000 Apr;46(2):69-78

Department of Botany, University of Nairobi, P.O. Box 30197, Nairobi, Kenya.

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April 2000