Paul Kirk

Paul Kirk

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Paul Kirk

Paul Kirk

Publications by authors named "Paul Kirk"

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Fast approximate inference for variable selection in Dirichlet process mixtures, with an application to pan-cancer proteomics.

Stat Appl Genet Mol Biol 2019 Dec 12;18(6). Epub 2019 Dec 12.

MRC Biostatistics Unit, School of Clinical Medicine, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1515/sagmb-2018-0065DOI Listing
December 2019

GPseudoClust: deconvolution of shared pseudo-profiles at single-cell resolution.

Bioinformatics 2019 Oct 14. Epub 2019 Oct 14.

MRC Biostatistics Unit, School of Clinical Medicine, University of Cambridge, Cambridge, CB2 0SR, UK.

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http://dx.doi.org/10.1093/bioinformatics/btz778DOI Listing
October 2019

A Bioconductor workflow for the Bayesian analysis of spatial proteomics.

F1000Res 2019 11;8:446. Epub 2019 Apr 11.

Université catholique de Louvain, Brussels, 1200, Belgium.

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http://dx.doi.org/10.12688/f1000research.18636.1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509962PMC
April 2019

A Bayesian mixture modelling approach for spatial proteomics.

PLoS Comput Biol 2018 11 27;14(11):e1006516. Epub 2018 Nov 27.

Computational Proteomics Unit, Department of Biochemistry, University of Cambridge, Cambridge, UK.

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http://dx.plos.org/10.1371/journal.pcbi.1006516
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http://dx.doi.org/10.1371/journal.pcbi.1006516DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6258510PMC
November 2018

Protax-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences.

New Phytol 2018 10 23;220(2):517-525. Epub 2018 Jul 23.

Organismal and Evolutionary Biology Research Programme, University of Helsinki, PO Box 65, Helsinki, FI-00014, Finland.

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http://dx.doi.org/10.1111/nph.15301DOI Listing
October 2018

Explaining European fungal fruiting phenology with climate variability.

Ecology 2018 06 8;99(6):1306-1315. Epub 2018 May 8.

Section for Genetics and Evolutionary Biology (EVOGENE), University of Oslo, Blindernveien 31, 0316, Oslo, Norway.

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http://doi.wiley.com/10.1002/ecy.2237
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http://dx.doi.org/10.1002/ecy.2237DOI Listing
June 2018

Sequence-based nomenclature: a reply to Thines and Zamora and provisions for an amended proposal "from the floor" to allow DNA sequences as types of names.

IMA Fungus 2018 Jun 11;9(1):185-198. Epub 2018 Jun 11.

Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK; Department of Life Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK; Jilin Agricultural University, Chanchung, Jilin province, 130118 China.

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http://dx.doi.org/10.5598/imafungus.2018.09.01.12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048568PMC
June 2018

Sequence-based classification and identification of Fungi.

Mycologia 2016 Nov/Dec;108(6):1049-1068

l Department of Plant Pathology and Environmental Microbiology, 121 Buckhout Laboratory, Penn State University, University Park, Pennsylvania 16802.

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http://dx.doi.org/10.3852/16-130DOI Listing
January 2018

Retroviruses integrate into a shared, non-palindromic DNA motif.

Nat Microbiol 2016 Nov 14;2:16212. Epub 2016 Nov 14.

Section of Virology, Division of Infectious Diseases, Imperial College London, London SW7 2AZ, UK.

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http://dx.doi.org/10.1038/nmicrobiol.2016.212DOI Listing
November 2016

MEANS: python package for Moment Expansion Approximation, iNference and Simulation.

Bioinformatics 2016 09 5;32(18):2863-5. Epub 2016 May 5.

Centre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, London SW7 2AZ, UK.

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http://dx.doi.org/10.1093/bioinformatics/btw229DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5018365PMC
September 2016

Beauveria medogensis sp. nov., a new fungus of the entomopathogenic genus from China.

J Invertebr Pathol 2016 09 19;139:74-81. Epub 2016 Jul 19.

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; Fujian Province Key Laboratory of Plant Virology, Institute of Plant Virology, Fujian Agricultural and Forest University, Fuzhou 350002, China; Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK. Electronic address:

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http://dx.doi.org/10.1016/j.jip.2016.07.006DOI Listing
September 2016

Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling.

Cell Rep 2016 06 2;15(11):2524-35. Epub 2016 Jun 2.

Centre for Integrative Systems Biology and Bioinformatics, Imperial College London, London SW7 2AZ, UK; Institute of Chemical Biology, Imperial College London, London SW7 2AZ, UK. Electronic address:

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http://www.cell.com/cell-reports/pdf/S2211-1247(16)30592-7.p
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http://linkinghub.elsevier.com/retrieve/pii/S221112471630592
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http://dx.doi.org/10.1016/j.celrep.2016.05.024DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4914773PMC
June 2016

Cellular population dynamics control the robustness of the stem cell niche.

Biol Open 2015 Oct 9;4(11):1420-6. Epub 2015 Oct 9.

Theoretical Systems Biology, Department of Life Sciences, Imperial College London, London SW7 2AZ, UK

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http://dx.doi.org/10.1242/bio.013714DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728354PMC
October 2015

PESI - a taxonomic backbone for Europe.

Authors:
Yde de Jong Juliana Kouwenberg Louis Boumans Charles Hussey Roger Hyam Nicola Nicolson Paul Kirk Alan Paton Ellinor Michel Michael D Guiry Phillip S Boegh Henrik Ærenlund Pedersen Henrik Enghoff Eckhard von Raab-Straube Anton Güntsch Marc Geoffroy Andreas Müller Andreas Kohlbecker Walter Berendsohn Ward Appeltans Christos Arvanitidis Bart Vanhoorne Joram Declerck Leen Vandepitte Francisco Hernandez Róisín Nash Mark John Costello David Ouvrard Pascale Bezard-Falgas Thierry Bourgoin Florian Tobias Wetzel Falko Glöckler Günther Korb Caroline Ring Gregor Hagedorn Christoph Häuser Nihat Aktaç Ahmet Asan Adorian Ardelean Paulo Alexandre Vieira Borges Dhimiter Dhora Hasmik Khachatryan Michael Malicky Shaig Ibrahimov Alexander Tuzikov Aaike De Wever Snejana Moncheva Nikolai Spassov Karel Chobot Alexi Popov Igor Boršić Spyros Sfenthourakis Urmas Kõljalg Pertti Uotila Gargominy Olivier Jean-Claude Dauvin David Tarkhnishvili Giorgi Chaladze Michael Tuerkay Anastasios Legakis László Peregovits Gudmundur Gudmundsson Erling Ólafsson Liam Lysaght Bella Sarah Galil Francesco M Raimondo Gianniantonio Domina Fabio Stoch Alessandro Minelli Voldermars Spungis Eduardas Budrys Sergej Olenin Armand Turpel Tania Walisch Vladimir Krpach Marie Therese Gambin Laurentia Ungureanu Gordan Karaman Roy M J C Kleukers Elisabeth Stur Kaare Aagaard Nils Valland Toril Loennechen Moen Wieslaw Bogdanowicz Piotr Tykarski Jan Marcin Węsławski Monika Kędra Antonio M de Frias Martins António Domingos Abreu Ricardo Silva Sergei Medvedev Alexander Ryss Smiljka Šimić Karol Marhold Eduard Stloukal Davorin Tome Marian A Ramos Benito Valdés Francisco Pina Sven Kullander Anders Telenius Yves Gonseth Pascal Tschudin Oleksandra Sergeyeva Volodymyr Vladymyrov Volodymyr Bohdanovych Rizun Chris Raper Dan Lear Pavel Stoev Lyubomir Penev Ana Casino Rubio Thierry Backeljau Hannu Saarenmaa Sandrine Ulenberg

Biodivers Data J 2015 28(3):e5848. Epub 2015 Sep 28.

Naturalis Biodiversity Center, Leiden, Netherlands.

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http://dx.doi.org/10.3897/BDJ.3.e5848DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4609752PMC
October 2015

Multivariate moment closure techniques for stochastic kinetic models.

J Chem Phys 2015 Sep;143(9):094107

Department of Life Sciences, Centre for Integrative Systems Biology and Bioinformatics, Imperial College London, London SW7 2AZ, United Kingdom.

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http://dx.doi.org/10.1063/1.4929837DOI Listing
September 2015

Use the PDSA model for effective change management.

Educ Prim Care 2015 07;26(4):279-81

Business Systems Support Unit, Wales Deanery, UK.

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http://dx.doi.org/10.1080/14739879.2015.11494356DOI Listing
July 2015

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Authors:
Conrad L Schoch Barbara Robbertse Vincent Robert Duong Vu Gianluigi Cardinali Laszlo Irinyi Wieland Meyer R Henrik Nilsson Karen Hughes Andrew N Miller Paul M Kirk Kessy Abarenkov M Catherine Aime Hiran A Ariyawansa Martin Bidartondo Teun Boekhout Bart Buyck Qing Cai Jie Chen Ana Crespo Pedro W Crous Ulrike Damm Z Wilhelm De Beer Bryn T M Dentinger Pradeep K Divakar Margarita Dueñas Nicolas Feau Katerina Fliegerova Miguel A García Zai-Wei Ge Gareth W Griffith Johannes Z Groenewald Marizeth Groenewald Martin Grube Marieka Gryzenhout Cécile Gueidan Liangdong Guo Sarah Hambleton Richard Hamelin Karen Hansen Valérie Hofstetter Seung-Beom Hong Jos Houbraken Kevin D Hyde Patrik Inderbitzin Peter R Johnston Samantha C Karunarathna Urmas Kõljalg Gábor M Kovács Ekaphan Kraichak Krisztina Krizsan Cletus P Kurtzman Karl-Henrik Larsson Steven Leavitt Peter M Letcher Kare Liimatainen Jian-Kui Liu D Jean Lodge Janet Jennifer Luangsa-ard H Thorsten Lumbsch Sajeewa S N Maharachchikumbura Dimuthu Manamgoda María P Martín Andrew M Minnis Jean-Marc Moncalvo Giuseppina Mulè Karen K Nakasone Tuula Niskanen Ibai Olariaga Tamás Papp Tamás Petkovits Raquel Pino-Bodas Martha J Powell Huzefa A Raja Dirk Redecker J M Sarmiento-Ramirez Keith A Seifert Bhushan Shrestha Soili Stenroos Benjamin Stielow Sung-Oui Suh Kazuaki Tanaka Leho Tedersoo M Teresa Telleria Dhanushka Udayanga Wendy A Untereiner Javier Diéguez Uribeondo Krishna V Subbarao Csaba Vágvölgyi Cobus Visagie Kerstin Voigt Donald M Walker Bevan S Weir Michael Weiß Nalin N Wijayawardene Michael J Wingfield J P Xu Zhu L Yang Ning Zhang Wen-Ying Zhuang Scott Federhen

Database (Oxford) 2014 30;2014. Epub 2014 Jun 30.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA, CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands, Department of Pharmaceutical Sciences - Microbiology, Università degli Studi di Perugia, Perugia, Italy, Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Westmead, Australia, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Göteborg, Sweden, Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37920, USA, Illinois Natural History Survey, University of Illinois, 1816 South Oak Street, Champaign, IL 61820, USA, Mycology Section, Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK, Natural History Museum, University of Tartu, 46 Vanemuise, 51014 Tartu, Estonia, Purdue University, Department of Botany and Plant Pathology, 915 W. State Street, West Lafayette, IN 47907, USA, Institute of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand, Imperial College London, Royal Botanic Gardens, Kew TW9 3DS, England, UK, Muséum National d'Histoire Naturelle, Dépt. Systématique et Evolution CP39, UMR7205, 12 Rue Buffon, F-75005 Paris, France, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, P. R. China, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain, Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany, Department of Microbiology and Plant Pathology, Forestry Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0001, South Africa, Real Jardín Botánico, RJB-CSIC,

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http://dx.doi.org/10.1093/database/bau061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4075928PMC
February 2015

SYSBIONS: nested sampling for systems biology.

Bioinformatics 2015 Feb 16;31(4):604-5. Epub 2014 Oct 16.

Centre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, London SW7 2AZ, UK.

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http://dx.doi.org/10.1093/bioinformatics/btu675DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4325544PMC
February 2015

Topological sensitivity analysis for systems biology.

Proc Natl Acad Sci U S A 2014 Dec 15;111(52):18507-12. Epub 2014 Dec 15.

Centre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, London SW7 2AZ, United Kingdom

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http://dx.doi.org/10.1073/pnas.1414026112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4284538PMC
December 2014

Naming and outline of -2014 including proposals for the protection or suppression of generic names.

Fungal Divers 2014 Nov 4;69(1):1-55. Epub 2014 Nov 4.

Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, People's Republic of China; World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, People's Republic of China; Institute of Excellence in Fungal Research, Chiang Rai 57100, Thailand.

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http://dx.doi.org/10.1007/s13225-014-0309-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4896388PMC
November 2014

Derivative processes for modelling metabolic fluxes.

Bioinformatics 2014 Jul 26;30(13):1892-8. Epub 2014 Feb 26.

Theoretical Systems Biology Group, Centre for Bioinformatics, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.

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http://dx.doi.org/10.1093/bioinformatics/btu069DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4071196PMC
July 2014

Model selection in systems biology depends on experimental design.

PLoS Comput Biol 2014 Jun 12;10(6):e1003650. Epub 2014 Jun 12.

Centre for Integrative Systems Biology at Imperial College London, London, United Kingdom.

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http://dx.doi.org/10.1371/journal.pcbi.1003650DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4055659PMC
June 2014

A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation.

Nat Protoc 2014 Feb 23;9(2):439-56. Epub 2014 Jan 23.

1] Department of Life Sciences, Centre for Integrative Systems Biology and Bioinformatics, Imperial College, London, UK. [2] Institute of Chemical Biology, Imperial College, London, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5081097PMC
http://dx.doi.org/10.1038/nprot.2014.025DOI Listing
February 2014

Balancing the robustness and predictive performance of biomarkers.

J Comput Biol 2013 Dec 2;20(12):979-89. Epub 2013 Aug 2.

1 Division of Molecular Biosciences, Imperial College London , London, United Kingdom .

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http://dx.doi.org/10.1089/cmb.2013.0018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6155475PMC
December 2013

Model selection in systems and synthetic biology.

Curr Opin Biotechnol 2013 Aug 8;24(4):767-74. Epub 2013 Apr 8.

Centre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, London SW7 2AZ, UK.

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http://dx.doi.org/10.1016/j.copbio.2013.03.012DOI Listing
August 2013

A general moment expansion method for stochastic kinetic models.

J Chem Phys 2013 May;138(17):174101

Division of Molecular Biosciences, Theoretical Systems Biology Group, Imperial College London, London SW7 2AZ, United Kingdom.

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http://dx.doi.org/10.1063/1.4802475DOI Listing
May 2013

Coronary anomalies in Klippel-Trenaunay-Weber syndrome: multidetector computed tomography and cardiac magnetic resonance study of a rare association.

Eur Heart J Cardiovasc Imaging 2013 Jan 16;14(1):88. Epub 2012 Aug 16.

Department of Cardiology, Southend University Hospital, Westcliff-on-Sea, UK.

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https://academic.oup.com/ehjcimaging/article-lookup/doi/10.1
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http://dx.doi.org/10.1093/ehjci/jes171DOI Listing
January 2013

P38 and JNK have opposing effects on persistence of in vivo leukocyte migration in zebrafish.

Immunol Cell Biol 2013 Jan 20;91(1):60-9. Epub 2012 Nov 20.

Department of Life Sciences, Division of Cell and Molecular Biology, Imperial College London, London, UK.

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http://dx.doi.org/10.1038/icb.2012.57DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3540327PMC
January 2013

Bayesian correlated clustering to integrate multiple datasets.

Bioinformatics 2012 Dec 9;28(24):3290-7. Epub 2012 Oct 9.

Systems Biology Centre, University of Warwick, Coventry, CV4 7AL, UK.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/bts595DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3519452PMC
December 2012

The magnitude of global marine species diversity.

Authors:
Ward Appeltans Shane T Ahyong Gary Anderson Martin V Angel Tom Artois Nicolas Bailly Roger Bamber Anthony Barber Ilse Bartsch Annalisa Berta Magdalena Błażewicz-Paszkowycz Phil Bock Geoff Boxshall Christopher B Boyko Simone Nunes Brandão Rod A Bray Niel L Bruce Stephen D Cairns Tin-Yam Chan Lanna Cheng Allen G Collins Thomas Cribb Marco Curini-Galletti Farid Dahdouh-Guebas Peter J F Davie Michael N Dawson Olivier De Clerck Wim Decock Sammy De Grave Nicole J de Voogd Daryl P Domning Christian C Emig Christer Erséus William Eschmeyer Kristian Fauchald Daphne G Fautin Stephen W Feist Charles H J M Fransen Hidetaka Furuya Oscar Garcia-Alvarez Sarah Gerken David Gibson Arjan Gittenberger Serge Gofas Liza Gómez-Daglio Dennis P Gordon Michael D Guiry Francisco Hernandez Bert W Hoeksema Russell R Hopcroft Damià Jaume Paul Kirk Nico Koedam Stefan Koenemann Jürgen B Kolb Reinhardt M Kristensen Andreas Kroh Gretchen Lambert David B Lazarus Rafael Lemaitre Matt Longshaw Jim Lowry Enrique Macpherson Laurence P Madin Christopher Mah Gill Mapstone Patsy A McLaughlin Jan Mees Kenneth Meland Charles G Messing Claudia E Mills Tina N Molodtsova Rich Mooi Birger Neuhaus Peter K L Ng Claus Nielsen Jon Norenburg Dennis M Opresko Masayuki Osawa Gustav Paulay William Perrin John F Pilger Gary C B Poore Phil Pugh Geoffrey B Read James D Reimer Marc Rius Rosana M Rocha José I Saiz-Salinas Victor Scarabino Bernd Schierwater Andreas Schmidt-Rhaesa Kareen E Schnabel Marilyn Schotte Peter Schuchert Enrico Schwabe Hendrik Segers Caryn Self-Sullivan Noa Shenkar Volker Siegel Wolfgang Sterrer Sabine Stöhr Billie Swalla Mark L Tasker Erik V Thuesen Tarmo Timm M Antonio Todaro Xavier Turon Seth Tyler Peter Uetz Jacob van der Land Bart Vanhoorne Leen P van Ofwegen Rob W M van Soest Jan Vanaverbeke Genefor Walker-Smith T Chad Walter Alan Warren Gary C Williams Simon P Wilson Mark J Costello

Curr Biol 2012 Dec 15;22(23):2189-202. Epub 2012 Nov 15.

Flemish Marine Data and Information Centre, Flanders Marine Institute, Oostende 8400, Belgium.

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http://dx.doi.org/10.1016/j.cub.2012.09.036DOI Listing
December 2012

Warming-induced shift in European mushroom fruiting phenology.

Proc Natl Acad Sci U S A 2012 Sep 20;109(36):14488-93. Epub 2012 Aug 20.

Microbial Evolution Research Group, Department of Biology, University of Oslo, NO-0316 Oslo, Norway.

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http://dx.doi.org/10.1073/pnas.1200789109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3437857PMC
September 2012

Elucidating the in vivo phosphorylation dynamics of the ERK MAP kinase using quantitative proteomics data and Bayesian model selection.

Mol Biosyst 2012 Jul 3;8(7):1921-9. Epub 2012 May 3.

Centre for Integrative Systems Biology and Bioinformatics, Division of Molecular Biosciences, Department of Life Sciences, Imperial College London, London, UK.

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http://dx.doi.org/10.1039/c2mb05493kDOI Listing
July 2012

Bayesian hierarchical clustering for microarray time series data with replicates and outlier measurements.

BMC Bioinformatics 2011 Oct 13;12:399. Epub 2011 Oct 13.

Systems Biology Centre, University of Warwick, Coventry, UK.

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http://dx.doi.org/10.1186/1471-2105-12-399DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3228548PMC
October 2011

The amsterdam declaration on fungal nomenclature.

IMA Fungus 2011 Jun 7;2(1):105-12. Epub 2011 Jun 7.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Plaza Ramón y Cajal, E-28040 Madrid, Spain; and Department of Botany, Natural History Museum, Cromwell Road, London SW7 5BD, UK;

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http://dx.doi.org/10.5598/imafungus.2011.02.01.14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3317370PMC
June 2011

Recent developments in the taxonomic affiliation and phylogenetic positioning of fungi: impact in applied microbiology and environmental biotechnology.

Appl Microbiol Biotechnol 2011 Apr 20;90(1):41-57. Epub 2011 Feb 20.

School of Biology and Pharmacy, Institute of Microbiology, Department of Microbiology and Molecular Biology, Jena Microbial Resource Collection, University of Jena, Neugasse 25, 07743, Jena, Germany.

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http://dx.doi.org/10.1007/s00253-011-3143-4DOI Listing
April 2011

Low prevalence of fibrosis in thalassemia major assessed by late gadolinium enhancement cardiovascular magnetic resonance.

J Cardiovasc Magn Reson 2011 Jan 17;13. Epub 2011 Jan 17.

Royal Brompton Hospital and Imperial College, London, UK.

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http://dx.doi.org/10.1186/1532-429X-13-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3025880PMC
January 2011

Myocardial T2* is not affected by ageing, myocardial fibrosis, or impaired left ventricular function.

J Magn Reson Imaging 2010 Nov;32(5):1095-8

Cardiovascular Magnetic Resonance Unit, Royal Brompton Hospital and Imperial College, London, United Kingdom.

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http://dx.doi.org/10.1002/jmri.22348DOI Listing
November 2010

Relation of myocardial T2* to right ventricular function in thalassaemia major.

Eur Heart J 2010 Jul 22;31(13):1648-54. Epub 2010 Apr 22.

Cardiovascular Magnetic Resonance Unit, Royal Brompton Hospital, Sydney Street, London SW3 6NP, UK.

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http://dx.doi.org/10.1093/eurheartj/ehq106DOI Listing
July 2010

ABC-SysBio--approximate Bayesian computation in Python with GPU support.

Bioinformatics 2010 Jul;26(14):1797-9

Centre for Bioinformatics, Division of Molecular Biosciences, Imperial College London, London, UK.

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http://dx.doi.org/10.1093/bioinformatics/btq278DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2894518PMC
July 2010

How to . . . give effective feedback.

Educ Prim Care 2010 Jul;21(4):267-9

Wales Postgraduate Deanery, Cardiff, UK.

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http://dx.doi.org/10.1080/14739879.2010.11493919DOI Listing
July 2010

Fungal ecology catches fire.

New Phytol 2009 Oct;184(2):279-82

Biology Department, Clark University, Worcester, MA 01610, USA.

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http://dx.doi.org/10.1111/j.1469-8137.2009.03042.xDOI Listing
October 2009

Gaussian process regression bootstrapping: exploring the effects of uncertainty in time course data.

Bioinformatics 2009 May 16;25(10):1300-6. Epub 2009 Mar 16.

Centre for Bioinformatics, Division of Molecular Biosciences, Imperial College London, London SW7 2AZ, UK.

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http://dx.doi.org/10.1093/bioinformatics/btp139DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2677737PMC
May 2009

Myocardial T*2 measurement in iron-overloaded thalassemia: an ex vivo study to investigate optimal methods of quantification.

Magn Reson Med 2008 Aug;60(2):350-6

National Heart and Lung Institute, Imperial College London, UK.

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http://dx.doi.org/10.1002/mrm.21625DOI Listing
August 2008

Parameter inference for biochemical systems that undergo a Hopf bifurcation.

Biophys J 2008 Jul 2;95(2):540-9. Epub 2008 May 2.

Division of Molecular Biosciences, Imperial College, London, England.

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http://dx.doi.org/10.1529/biophysj.107.126086DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2440454PMC
July 2008

Fraud and deceit in medical research.

Br J Hosp Med (Lond) 2007 Oct;68(10):543-6

Charing Cross Hospital, London.

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http://dx.doi.org/10.12968/hmed.2007.68.10.27325DOI Listing
October 2007

Black-blood T2* technique for myocardial iron measurement in thalassemia.

J Magn Reson Imaging 2007 Jun;25(6):1205-9

Cardiovascular Magnetic Resonance Unit, Royal Brompton Hospital and Imperial College, Sydney Street, London, United Kingdom.

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June 2007

Massive hemorrhage in a previously undiagnosed abdominal pregnancy presenting for elective Cesarean delivery.

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January 2004

Genetic similarity among Cercospora apii-group species and their detection in host plant tissue by PCR/RFLP analyses of the rDNA internal transcribed spacer (ITS).

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April 2000