Paul A Haynes

Paul A Haynes

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Paul A Haynes

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Proteomic Responses to Drought Vary Widely Among Eight Diverse Genotypes of Rice ().

Int J Mol Sci 2020 Jan 6;21(1). Epub 2020 Jan 6.

Department of Molecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia.

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http://dx.doi.org/10.3390/ijms21010363DOI Listing
January 2020

Plant-Microbe Symbiosis: What Has Proteomics Taught Us?

Proteomics 2019 08;19(16):e1800105

Department of Systems Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research, Education, and Extension Organization (AREEO), Karaj, Iran.

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http://dx.doi.org/10.1002/pmic.201800105DOI Listing
August 2019

Proteomes of Leaf-Growing Zones in Rice Genotypes with Contrasting Drought Tolerance.

Proteomics 2019 05 18;19(9):e1800310. Epub 2019 Apr 18.

Department of Biological Sciences, Macquarie University, North Ryde, NSW, 2109, Australia.

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http://dx.doi.org/10.1002/pmic.201800310DOI Listing
May 2019

The Quest for Missing Proteins in Rice.

Mol Plant 2019 01 11;12(1):4-6. Epub 2018 Dec 11.

Department of Systems Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREO), Karaj, Iran; Department of Molecular Sciences, Macquarie University, Sydney, Australia. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S16742052183036
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http://dx.doi.org/10.1016/j.molp.2018.11.009DOI Listing
January 2019

The Art of Validating Quantitative Proteomics Data.

Proteomics 2018 12 25;18(23):e1800222. Epub 2018 Nov 25.

Department of Molecular Sciences, Macquarie University, Sydney, NSW 2109, Australia.

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http://doi.wiley.com/10.1002/pmic.201800222
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http://dx.doi.org/10.1002/pmic.201800222DOI Listing
December 2018

Surface markers of human embryonic stem cells: a meta analysis of membrane proteomics reports.

Expert Rev Proteomics 2018 11 29;15(11):911-922. Epub 2018 Oct 29.

a Department of Molecular Systems Biology at Cell Science Research Center , Royan Institute for Stem Cell Biology and Technology, ACECR , Tehran , Iran.

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https://www.tandfonline.com/doi/full/10.1080/14789450.2018.1
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http://dx.doi.org/10.1080/14789450.2018.1539669DOI Listing
November 2018

Shotgun proteomic analysis of photoperiod regulated dormancy induction in grapevine.

J Proteomics 2018 09 29;187:13-24. Epub 2018 May 29.

Department of Molecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2018.05.014DOI Listing
September 2018

Prospective Isolation of ISL1 Cardiac Progenitors from Human ESCs for Myocardial Infarction Therapy.

Stem Cell Reports 2018 03 1;10(3):848-859. Epub 2018 Mar 1.

Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Banihashem Square, Banihashem Street, Ressalat Highway, Tehran, Iran; Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22136711183006
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http://dx.doi.org/10.1016/j.stemcr.2018.01.037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5918615PMC
March 2018

Low Focal Adhesion Signaling Promotes Ground State Pluripotency of Mouse Embryonic Stem Cells.

J Proteome Res 2017 10 13;16(10):3585-3595. Epub 2017 Sep 13.

Department of Developmental Biology, University of Science and Culture, Academic Center for Education, Culture and Research (ACECR) , Tehran, Iran.

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http://dx.doi.org/10.1021/acs.jproteome.7b00322DOI Listing
October 2017

Quantitative proteomic analysis of human testis reveals system-wide molecular and cellular pathways associated with non-obstructive azoospermia.

J Proteomics 2017 06 15;162:141-154. Epub 2017 Feb 15.

Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran; Agricultural Biotechnology Research Institute of Iran, Karaj, Tehran, Iran. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2017.02.007DOI Listing
June 2017

Multiple testing corrections in quantitative proteomics: A useful but blunt tool.

Proteomics 2016 09;16(18):2448-53

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia.

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http://dx.doi.org/10.1002/pmic.201600044DOI Listing
September 2016

Quantitative proteomics in Giardia duodenalis-Achievements and challenges.

Mol Biochem Parasitol 2016 08 19;208(2):96-112. Epub 2016 Jul 19.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.molbiopara.2016.07.002DOI Listing
August 2016

Relative quantification of phosphoproteomic changes in grapevine (Vitis vinifera L.) leaves in response to abscisic acid.

Hortic Res 2016 22;3:16029. Epub 2016 Jun 22.

Department of Biochemistry and Molecular Biology, University of Nevada, Reno , Reno, NV, USA.

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http://dx.doi.org/10.1038/hortres.2016.29DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4916266PMC
July 2016

PlantPReS: A database for plant proteome response to stress.

J Proteomics 2016 06 3;143:69-72. Epub 2016 Mar 3.

Agricultural Biotechnology Research Institute of Iran, Karaj, Tehran, Iran; Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2016.03.009DOI Listing
June 2016

Quantitative proteomic analysis of two different rice varieties reveals that drought tolerance is correlated with reduced abundance of photosynthetic machinery and increased abundance of ClpD1 protease.

J Proteomics 2016 06 16;143:73-82. Epub 2016 May 16.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2016.05.014DOI Listing
June 2016

Quantitative Proteomic Analysis of the Orbital Frontal Cortex in Rats Following Extended Exposure to Caffeine Reveals Extensive Changes to Protein Expression: Implications for Neurological Disease.

J Proteome Res 2016 05 11;15(5):1455-71. Epub 2016 Apr 11.

Department of Psychology, ‡Department of Chemistry and Biomolecular Sciences, §Faculty of Human Sciences, and ⊥Department of Biomedical Sciences, Macquarie University , North Ryde, New South Wales 2109, Australia.

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http://dx.doi.org/10.1021/acs.jproteome.5b01043DOI Listing
May 2016

Post-translational processing targets functionally diverse proteins in Mycoplasma hyopneumoniae.

Open Biol 2016 Feb;6(2):150210

The ithree Institute, University of Technology Sydney, PO Box 123, Broadway, New South Wales 2007, Australia Proteomics Core Facility, University of Technology Sydney, PO Box 123, Broadway, New South Wales 2007, Australia

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http://dx.doi.org/10.1098/rsob.150210DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772806PMC
February 2016

Induction of virulence factors in Giardia duodenalis independent of host attachment.

Sci Rep 2016 Feb 12;6:20765. Epub 2016 Feb 12.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia.

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http://dx.doi.org/10.1038/srep20765DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4751611PMC
February 2016

Data from a proteomic baseline study of Assemblage A in Giardia duodenalis.

Data Brief 2015 Dec 19;5:23-7. Epub 2015 Aug 19.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia.

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http://dx.doi.org/10.1016/j.dib.2015.08.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4556777PMC
December 2015

Proteome Analysis of Ground State Pluripotency.

Sci Rep 2015 Dec 16;5:17985. Epub 2015 Dec 16.

Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran.

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http://dx.doi.org/10.1038/srep17985DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4680864PMC
December 2015

Protein identification and quantification from riverbank grape, Vitis riparia: Comparing SDS-PAGE and FASP-GPF techniques for shotgun proteomic analysis.

Proteomics 2015 Sep 22;15(17):3061-5. Epub 2015 Jun 22.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.201500085DOI Listing
September 2015

Quantitative proteomic analysis of cabernet sauvignon grape cells exposed to thermal stresses reveals alterations in sugar and phenylpropanoid metabolism.

Proteomics 2015 Sep 15;15(17):3048-60. Epub 2015 Jun 15.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, Australia.

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http://dx.doi.org/10.1002/pmic.201400541DOI Listing
September 2015

DDX3Y, a Male-Specific Region of Y Chromosome Gene, May Modulate Neuronal Differentiation.

J Proteome Res 2015 Sep 22;14(9):3474-83. Epub 2015 Jul 22.

Department of Stem Cells Biology & Technology, Royan Institute , Banihashem Sq., Banihashem St., Ressalat highway, Tehran, Iran.

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http://pubs.acs.org/doi/10.1021/acs.jproteome.5b00512
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http://dx.doi.org/10.1021/acs.jproteome.5b00512DOI Listing
September 2015

Two Splice Variants of Y Chromosome-Located Lysine-Specific Demethylase 5D Have Distinct Function in Prostate Cancer Cell Line (DU-145).

J Proteome Res 2015 Sep 10;14(9):3492-502. Epub 2015 Aug 10.

Molecular Systems Biology Department at Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR , Tehran, Iran.

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http://dx.doi.org/10.1021/acs.jproteome.5b00333DOI Listing
September 2015

Quantitative proteomic analysis of Giardia duodenalis assemblage A: A baseline for host, assemblage, and isolate variation.

Proteomics 2015 Jul 30;15(13):2281-5. Epub 2015 Mar 30.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia.

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http://doi.wiley.com/10.1002/pmic.201400434
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http://dx.doi.org/10.1002/pmic.201400434DOI Listing
July 2015

Proteomics of Important Food Crops in the Asia Oceania Region: Current Status and Future Perspectives.

J Proteome Res 2015 Jul 11;14(7):2723-44. Epub 2015 Jun 11.

○National Institute of Crop Science, Tsukuba, Ibaraki 305-8518, Japan.

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http://dx.doi.org/10.1021/acs.jproteome.5b00211DOI Listing
July 2015

The generation gap: Proteome changes and strain variation during encystation in Giardia duodenalis.

Mol Biochem Parasitol 2015 May 1;201(1):47-56. Epub 2015 Jun 1.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.molbiopara.2015.05.007DOI Listing
May 2015

Methamphetamine-induced sensitization is associated with alterations to the proteome of the prefrontal cortex: implications for the maintenance of psychotic disorders.

J Proteome Res 2015 Jan 17;14(1):397-410. Epub 2014 Oct 17.

Department of Psychology, ‡Department of Chemistry and Biomolecular Sciences, §Australian School of Advanced Medicine, Macquarie University , Sydney, New South Wales 2109, Australia.

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http://dx.doi.org/10.1021/pr500719fDOI Listing
January 2015

Recent advances in proteomics applied to elucidate the role of environmental impacts on human health and organismal function.

J Proteome Res 2015 Jan;14(1):1-4

Center for Environmental Security, Biodesign Institute, Arizona State University , 781 East Terrace Mall, Tempe, Arizona 85287, United States.

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http://pubs.acs.org/doi/10.1021/pr501224f
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http://dx.doi.org/10.1021/pr501224fDOI Listing
January 2015

Current perspectives in proteomic analysis of abiotic stress in Grapevines.

Front Plant Sci 2014 8;5:686. Epub 2014 Dec 8.

Department of Chemistry and Biomolecular Sciences, Macquarie University North Ryde, NSW, Australia.

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http://dx.doi.org/10.3389/fpls.2014.00686DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4258992PMC
December 2014

Proteomic analysis in Giardia duodenalis yields insights into strain virulence and antigenic variation.

Proteomics 2014 Nov;14(21-22):2523-34

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, New South Wales, Australia.

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http://dx.doi.org/10.1002/pmic.201400144DOI Listing
November 2014

Analysis of rice proteins using SDS-PAGE shotgun proteomics.

Methods Mol Biol 2014 ;1072:289-302

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia.

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http://dx.doi.org/10.1007/978-1-62703-631-3_21DOI Listing
May 2014

Label-free quantitative shotgun proteomics using normalized spectral abundance factors.

Methods Mol Biol 2013 ;1002:205-22

Macquarie University, North Ryde, NSW, Australia.

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http://dx.doi.org/10.1007/978-1-62703-360-2_17DOI Listing
February 2014

Plant proteogenomics: from protein extraction to improved gene predictions.

Methods Mol Biol 2013 ;1002:267-94

Centre for Comparative Genomics, Murdoch University, Perth, WA, Australia.

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http://dx.doi.org/10.1007/978-1-62703-360-2_21DOI Listing
February 2014

Manipulating root water supply elicits major shifts in the shoot proteome.

J Proteome Res 2014 Feb 3;13(2):517-26. Epub 2013 Dec 3.

Australian School of Advanced Medicine, Faculty of Human Sciences, Macquarie University , Sydney, New South Wales, Australia.

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http://dx.doi.org/10.1021/pr400696uDOI Listing
February 2014

Shotgun label-free quantitative proteomics of water-deficit-stressed midmature peanut (Arachis hypogaea L.) seed.

J Proteome Res 2013 Nov 14;12(11):5048-57. Epub 2013 Oct 14.

Center for Biotechnology and Genomics, Texas Tech University , Canton & Main, Experimental Sciences Building, Room 101, Lubbock, Texas 79409, United States.

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http://pubs.acs.org/doi/10.1021/pr400936d
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http://dx.doi.org/10.1021/pr400936dDOI Listing
November 2013

Realizing the potential of agricultural and environmental proteomics.

J Proteome Res 2013 Nov;12(11):4651

National Institute of Crop Science/University of Tsukuba , 2-1-18 Kannondai, Tsukuba 305-8518, Japan.

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http://dx.doi.org/10.1021/pr4010426DOI Listing
November 2013

Proteomic analysis of the dorsal and ventral hippocampus of rats maintained on a high fat and refined sugar diet.

Proteomics 2013 Oct 18;13(20):3076-91. Epub 2013 Sep 18.

Department of Psychology, Macquarie University, Sydney, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.201300124DOI Listing
October 2013

The influence of signals from chilled roots on the proteome of shoot tissues in rice seedlings.

Proteomics 2013 Jun 6;13(12-13):1922-33. Epub 2013 Jun 6.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, New South Wales, Australia.

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http://dx.doi.org/10.1002/pmic.201200475DOI Listing
June 2013

Shotgun proteomics of coelomic fluid from the purple sea urchin, Strongylocentrotus purpuratus.

Dev Comp Immunol 2013 May 23;40(1):35-50. Epub 2013 Jan 23.

Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia.

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https://linkinghub.elsevier.com/retrieve/pii/S0145305X130002
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http://dx.doi.org/10.1016/j.dci.2013.01.007DOI Listing
May 2013

Shotgun proteomic analysis of the Mexican lime tree infected with "CandidatusPhytoplasma aurantifolia".

J Proteome Res 2013 Feb 7;12(2):785-95. Epub 2013 Jan 7.

Department of Genomics, Agricultural Biotechnology Research Institute of Iran, Karaj, Tehran, Iran.

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http://dx.doi.org/10.1021/pr300865tDOI Listing
February 2013

Degradation of white wine haze proteins by Aspergillopepsin I and II during juice flash pasteurization.

Food Chem 2012 Dec 17;135(3):1157-65. Epub 2012 May 17.

The Australian Wine Research Institute, P.O. Box 197, Glen Osmond (Adelaide), SA 5064, Australia.

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http://dx.doi.org/10.1016/j.foodchem.2012.05.042DOI Listing
December 2012

Time course proteomic profiling of cellular responses to immunological challenge in the sea urchin, Heliocidaris erythrogramma.

Dev Comp Immunol 2012 Jun 20;37(2):243-56. Epub 2012 Mar 20.

Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia.

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http://linkinghub.elsevier.com/retrieve/pii/S0145305X1200044
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http://dx.doi.org/10.1016/j.dci.2012.03.006DOI Listing
June 2012

Proteomic discovery of biomarkers of metal contamination in Sydney Rock oysters (Saccostrea glomerata).

Aquat Toxicol 2012 Mar 5;109:202-12. Epub 2011 Oct 5.

Department of Biological Sciences, Macquarie University, NSW 2109, Australia.

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http://dx.doi.org/10.1016/j.aquatox.2011.09.018DOI Listing
March 2012

Promoting agriculture proteome research activities in the Asia and Oceania region.

J Proteome Res 2012 Mar 9;11(3):1461. Epub 2012 Feb 9.

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http://dx.doi.org/10.1021/pr300063zDOI Listing
March 2012

Differential regulation of aquaporins, small GTPases and V-ATPases proteins in rice leaves subjected to drought stress and recovery.

Proteomics 2012 Mar;12(6):864-77

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.201100389DOI Listing
March 2012

Quantitative proteomics of heavy metal stress responses in Sydney rock oysters.

Proteomics 2012 Mar;12(6):906-21

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.201100417DOI Listing
March 2012

PloGO: plotting gene ontology annotation and abundance in multi-condition proteomics experiments.

Proteomics 2012 Feb 18;12(3):406-10. Epub 2012 Jan 18.

Australian Proteome Analysis Facility, Macquarie University, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.201100445DOI Listing
February 2012

Shotgun proteomic analysis of long-distance drought signaling in rice roots.

J Proteome Res 2012 Jan 2;11(1):348-58. Epub 2011 Dec 2.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia.

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http://pubs.acs.org/doi/10.1021/pr2008779
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http://dx.doi.org/10.1021/pr2008779DOI Listing
January 2012

Liver membrane proteome glycosylation changes in mice bearing an extra-hepatic tumor.

Mol Cell Proteomics 2011 Sep 18;10(9):M900538MCP200. Epub 2010 Feb 18.

Department of Chemistry and Biomolecular Sciences, Macquarie University, NSW 2109 Australia.

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http://dx.doi.org/10.1074/mcp.M900538-MCP200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3186205PMC
September 2011

Comparative protein expression in different strains of the bloom-forming cyanobacterium Microcystis aeruginosa.

Mol Cell Proteomics 2011 Sep 24;10(9):M110.003749. Epub 2011 May 24.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, NSW 2052, Australia.

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http://www.mcponline.org/lookup/doi/10.1074/mcp.M110.003749
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http://dx.doi.org/10.1074/mcp.M110.003749DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3186190PMC
September 2011

Mammalian forebrain ketimine reductase identified as μ-crystallin; potential regulation by thyroid hormones.

J Neurochem 2011 Aug 15;118(3):379-87. Epub 2011 Mar 15.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, New South Wales, Australia.

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http://dx.doi.org/10.1111/j.1471-4159.2011.07220.xDOI Listing
August 2011

Differential proteomic response of rice (Oryza sativa) leaves exposed to high- and low-temperature stress.

Proteomics 2011 Jul 22;11(14):2839-50. Epub 2011 Jun 22.

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia.

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http://dx.doi.org/10.1002/pmic.201100068DOI Listing
July 2011

A proteomic analysis of the effects of metal contamination on Sydney Rock Oyster (Saccostrea glomerata) haemolymph.

Aquat Toxicol 2011 Jun 17;103(3-4):241-9. Epub 2011 Mar 17.

Department of Biological Sciences, Macquarie University, NSW 2109, Australia.

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http://linkinghub.elsevier.com/retrieve/pii/S0166445X1100075
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http://dx.doi.org/10.1016/j.aquatox.2011.03.004DOI Listing
June 2011

Quantitative proteomic analysis of cold-responsive proteins in rice.

Proteomics 2011 May 22;11(9):1696-706. Epub 2011 Mar 22.

Department of Chemistry and Biomolecular Sciences, Macquarie University, NSW, Australia.

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http://doi.wiley.com/10.1002/pmic.201000727
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http://dx.doi.org/10.1002/pmic.201000727DOI Listing
May 2011

Plant proteomics.

Proteomics 2011 May;11(9):1557-8

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http://dx.doi.org/10.1002/pmic.201190035DOI Listing
May 2011

Comparative proteomic analysis of a sea urchin (Heliocidaris erythrogramma) antibacterial response revealed the involvement of apextrin and calreticulin.

J Invertebr Pathol 2011 Feb 25;106(2):223-9. Epub 2010 Sep 25.

Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia.

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http://dx.doi.org/10.1016/j.jip.2010.09.008DOI Listing
February 2011

Less label, more free: approaches in label-free quantitative mass spectrometry.

Proteomics 2011 Feb 17;11(4):535-53. Epub 2011 Jan 17.

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.201000553DOI Listing
February 2011

Shotgun proteomic profiling of five species of New Zealand Pachycladon.

Proteomics 2011 Jan 6;11(1):166-71. Epub 2010 Dec 6.

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.200900816DOI Listing
January 2011

Roles of grape thaumatin-like protein and chitinase in white wine haze formation.

J Agric Food Chem 2011 Jan 28;59(2):733-40. Epub 2010 Dec 28.

The Australian Wine Research Institute, PO Box 197, Glen Osmond, SA 5064, Australia.

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http://dx.doi.org/10.1021/jf1038234DOI Listing
January 2011

Differential metabolic response of cultured rice (Oryza sativa) cells exposed to high- and low-temperature stress.

Proteomics 2010 Aug;10(16):3001-19

Department of Chemistry & Biomolecular Sciences, Macquarie University, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.201000054DOI Listing
August 2010

Physiological and molecular changes in Oryza meridionalis Ng., a heat-tolerant species of wild rice.

J Exp Bot 2010 ;61(1):191-202

Department of Biological Sciences, Macquarie University, NSW 2109, Australia.

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http://dx.doi.org/10.1093/jxb/erp294DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2791120PMC
March 2010

NF45 and NF90 regulate HS4-dependent interleukin-13 transcription in T cells.

J Biol Chem 2010 Mar 5;285(11):8256-67. Epub 2010 Jan 5.

Functional Genomics Laboratory, Arizona Respiratory Center, University of Arizona, Tucson, Arizona 85719, USA.

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http://dx.doi.org/10.1074/jbc.M109.041004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2832977PMC
March 2010

Engineered rings of mixed yeast Lsm proteins show differential interactions with translation factors and U-rich RNA.

Biochemistry 2010 Mar;49(11):2335-45

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.

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http://dx.doi.org/10.1021/bi901767wDOI Listing
March 2010

Proteomic analysis of temperature stress in plants.

Proteomics 2010 Feb;10(4):828-45

Department of Chemistry and Biomolecular Sciences, Macquarie University, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.200900538DOI Listing
February 2010

Proteomic analysis of Drosophila mojavensis male accessory glands suggests novel classes of seminal fluid proteins.

Insect Biochem Mol Biol 2009 May-Jun;39(5-6):366-71. Epub 2009 Mar 28.

Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, 85721, USA.

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http://dx.doi.org/10.1016/j.ibmb.2009.03.003DOI Listing
July 2009

Grape and wine proteins: their fractionation by hydrophobic interaction chromatography and identification by chromatographic and proteomic analysis.

J Agric Food Chem 2009 May 8;57(10):4415-25. Epub 2009 Apr 8.

Dipartimento di Biotecnologie agrarie and Centro Interdipartimentale per la Ricerca in Viticoltura ed Enologia, Università di Padova, via dell'Università 16, I-35020 Legnaro, PD, Italy.

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http://dx.doi.org/10.1021/jf9000742DOI Listing
May 2009

Proteomic analysis of a filamentous fungal endophyte using EST datasets.

Proteomics 2009 Apr;9(8):2295-300

AgResearch Ltd., Grasslands Research Centre, Palmerston North, New Zealand.

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http://dx.doi.org/10.1002/pmic.200800585DOI Listing
April 2009

Rat liver membrane glycoproteome: enrichment by phase partitioning and glycoprotein capture.

J Proteome Res 2009 Feb;8(2):770-81

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney Australia.

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http://dx.doi.org/10.1021/pr800910wDOI Listing
February 2009

Crystal structure of Lsm3 octamer from Saccharomyces cerevisiae: implications for Lsm ring organisation and recruitment.

J Mol Biol 2008 Apr 11;377(5):1357-71. Epub 2008 Jan 11.

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.

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http://dx.doi.org/10.1016/j.jmb.2008.01.007DOI Listing
April 2008

Proteomic analysis of shade-avoidance response in tomato leaves.

J Agric Food Chem 2007 Oct 18;55(21):8310-8. Epub 2007 Sep 18.

Department of Biochemistry and Molecular Biophysics, Department of Chemistry, and Bio5 Institute for Collaborative Bioresearch, The University of Arizona, Tucson, Arizona 85721, USA.

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http://dx.doi.org/10.1021/jf0713049DOI Listing
October 2007

Subcellular shotgun proteomics in plants: looking beyond the usual suspects.

Proteomics 2007 Aug;7(16):2963-75

Department of Chemistry and Biomolecular Sciences, Macquarie University, North Ryde, NSW, Australia.

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http://dx.doi.org/10.1002/pmic.200700216DOI Listing
August 2007

Two-dimensional differential in-gel electrophoresis (DIGE) of leaf and roots of Lycopersicon esculentum.

Methods Mol Biol 2007 ;355:157-74

Department of Biochemistry and Molecular Biophysics, University of Arizona, Tucson, USA.

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http://dx.doi.org/10.1385/1-59745-227-0:157DOI Listing
February 2007

Two-dimensional nanoflow liquid chromatography-tandem mass spectrometry of proteins extracted from rice leaves and roots.

Methods Mol Biol 2007 ;355:249-66

Department of Chemistry, University of Arizona, Tucson, USA.

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http://dx.doi.org/10.1385/1-59745-227-0:249DOI Listing
February 2007

Verification of single-peptide protein identifications by the application of complementary database search algorithms.

J Biomol Tech 2006 Dec;17(5):327-32

Department of Biochemistry and Molecular Biophysics, The University of Arizona, Tucson, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2291803PMC
December 2006

Identification of proteins from a cell wall fraction of the diatom Thalassiosira pseudonana: insights into silica structure formation.

Mol Cell Proteomics 2006 Jan 5;5(1):182-93. Epub 2005 Oct 5.

Marine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, 92093-0202, USA.

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http://dx.doi.org/10.1074/mcp.M500174-MCP200DOI Listing
January 2006

Composition and structure of the 80S ribosome from the green alga Chlamydomonas reinhardtii: 80S ribosomes are conserved in plants and animals.

J Mol Biol 2005 Aug;351(2):266-79

Department of Cell Biology and the Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1016/j.jmb.2005.06.022DOI Listing
August 2005

Analysis of secreted proteins from Aspergillus flavus.

Proteomics 2005 Aug;5(12):3153-61

Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ 85287-1604, USA.

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http://dx.doi.org/10.1002/pmic.200401136DOI Listing
August 2005

Development of a system for the study of protein-protein interactions in planta: characterization of a TATA-box binding protein complex in Oryza sativa.

J Proteome Res 2003 Sep-Oct;2(5):514-22

Department of Functional Genomics, Torrey Mesa Research Institute, Syngenta Research and Technology, San Diego, California 92121, USA.

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http://dx.doi.org/10.1021/pr034023zDOI Listing
June 2004

Protein disulfide bond formation in the cytoplasm during oxidative stress.

J Biol Chem 2004 May 18;279(21):21749-58. Epub 2004 Mar 18.

Cellular Neurobiology Laboratory, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.

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http://dx.doi.org/10.1074/jbc.M312267200DOI Listing
May 2004