Patrick McDonel

Patrick McDonel

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Patrick McDonel

Patrick McDonel

Publications by authors named "Patrick McDonel"

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16Publications

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Comparative Analysis of Immune Cells Reveals a Conserved Regulatory Lexicon.

Cell Syst 2018 Mar 14;6(3):381-394.e7. Epub 2018 Feb 14.

Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA; Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA; Bioinformatics Core, University of Massachusetts Medical School, Worcester, MA 01605, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2018.01.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5876141PMC
March 2018

Local regulation of gene expression by lncRNA promoters, transcription and splicing.

Nature 2016 11 26;539(7629):452-455. Epub 2016 Oct 26.

Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA.

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http://www.nature.com/articles/nature20149
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http://dx.doi.org/10.1038/nature20149DOI Listing
November 2016

Xist recruits the X chromosome to the nuclear lamina to enable chromosome-wide silencing.

Science 2016 10 4;354(6311):468-472. Epub 2016 Aug 4.

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.

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http://dx.doi.org/10.1126/science.aae0047DOI Listing
October 2016

Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits.

Cell 2016 Jun;165(6):1530-1545

Division of Hematology/Oncology, The Manton Center for Orphan Disease Research, Boston Children's Hospital and Department of Pediatric Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02115, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Harvard Stem Cell Institute, Cambridge, MA 02138, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2016.04.048DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4893171PMC
June 2016

Insight into GATA1 transcriptional activity through interrogation of cis elements disrupted in human erythroid disorders.

Proc Natl Acad Sci U S A 2016 Apr 4;113(16):4434-9. Epub 2016 Apr 4.

Division of Hematology/Oncology, Manton Center for Orphan Disease Research, Boston Children's Hospital, Boston, MA 02115; Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA; 02115; The Broad Institute, Cambridge, MA 02142;

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http://dx.doi.org/10.1073/pnas.1521754113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4843446PMC
April 2016

Multiple cell and population-level interactions with mouse embryonic stem cell heterogeneity.

Development 2015 Aug 24;142(16):2840-9. Epub 2015 Jul 24.

Medical Research Council Laboratory for Molecular Cell Biology and Department of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK

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http://dx.doi.org/10.1242/dev.120741DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4550964PMC
August 2015

RNA-RNA interactions enable specific targeting of noncoding RNAs to nascent Pre-mRNAs and chromatin sites.

Cell 2014 Sep;159(1):188-199

Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Department of Biology, MIT, Cambridge, MA 02139, USA; Department of Systems Biology, Harvard Medical School, Boston, MA 02114, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2014.08.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177037PMC
September 2014

Sin3a is essential for the genome integrity and viability of pluripotent cells.

Dev Biol 2012 Mar 20;363(1):62-73. Epub 2011 Dec 20.

Wellcome Trust Centre for Stem Cell Research, University of Cambridge, Tennis Court Road, Cambridge CB2 1QR, UK.

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http://dx.doi.org/10.1016/j.ydbio.2011.12.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3334623PMC
March 2012

Clustered DNA motifs mark X chromosomes for repression by a dosage compensation complex.

Nature 2006 Nov 19;444(7119):614-8. Epub 2006 Nov 19.

Howard Hughes Medical Institute, University of California-Berkeley, 16 Barker Hall, Berkeley, California 94720-3204, USA.

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http://dx.doi.org/10.1038/nature05338DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2693371PMC
November 2006

Recruitment and spreading of the C. elegans dosage compensation complex along X chromosomes.

Science 2004 Feb;303(5661):1182-5

Howard Hughes Medical Institute and Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720-3204, USA.

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http://dx.doi.org/10.1126/science.1092938DOI Listing
February 2004

Phylogenetic relationships in Gleditsia (Leguminosae) based on ITS sequences.

Am J Bot 2003 Feb;90(2):310-20

Department of Biological Sciences, Indiana University South Bend, South Bend, Indiana 46634 USA;

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http://dx.doi.org/10.3732/ajb.90.2.310DOI Listing
February 2003