Pascal Frey

Pascal Frey

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Pascal Frey

Pascal Frey

Publications by authors named "Pascal Frey"

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Continual hemodynamic monitoring with a single-use transesophageal echocardiography probe in critically ill patients with shock: a randomized controlled clinical trial.

Intensive Care Med 2019 Aug 4;45(8):1093-1102. Epub 2019 Jul 4.

Department of Intensive Care Medicine, University Hospital, University of Bern, 3010, Bern, Switzerland.

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http://dx.doi.org/10.1007/s00134-019-05670-6DOI Listing
August 2019

Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study.

Antimicrob Resist Infect Control 2019 6;8:97. Epub 2019 Jun 6.

1Department of General Internal Medicine, University Hospital Bern (Inselspital), University of Bern, 3010 Bern, Switzerland.

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http://dx.doi.org/10.1186/s13756-019-0546-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6555736PMC
June 2019

The Rust Fungus Melampsora larici-populina Expresses a Conserved Genetic Program and Distinct Sets of Secreted Protein Genes During Infection of Its Two Host Plants, Larch and Poplar.

Mol Plant Microbe Interact 2018 07 6;31(7):695-706. Epub 2018 Jun 6.

1 INRA/Université de Lorraine, UMR 1136 Interactions Arbres/Microorganismes, INRA Centre Grand Est-Nancy, F-54280 Champenoux, France; and.

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http://dx.doi.org/10.1094/MPMI-12-17-0319-RDOI Listing
July 2018

The escalatory Red Queen: Population extinction and replacement following arms race dynamics in poplar rust.

Mol Ecol 2017 Apr 27;26(7):1902-1918. Epub 2017 Jan 27.

UMR IAM, INRA, Université de Lorraine, 54000, Nancy, France.

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http://doi.wiley.com/10.1111/mec.13980
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http://dx.doi.org/10.1111/mec.13980DOI Listing
April 2017

Pneumococcal carriage and serotype variation before and after introduction of pneumococcal conjugate vaccines in patients with acute otitis media in Switzerland.

Vaccine 2017 04 6;35(15):1946-1953. Epub 2017 Mar 6.

Institute for Infectious Diseases, University of Bern, Bern, Switzerland; Department of Infectious Diseases, Inselspital, University Hospital Bern, University of Bern, Bern, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.vaccine.2017.02.010DOI Listing
April 2017

Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni.

Appl Environ Microbiol 2016 12 21;82(24):7142-7153. Epub 2016 Nov 21.

UMR IAM, INRA, Université de Lorraine, Nancy, France

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http://dx.doi.org/10.1128/AEM.02221-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5118925PMC
December 2016

Genetic signatures of a range expansion in natura: when clones play leapfrog.

Ecol Evol 2016 09 26;6(18):6625-6632. Epub 2016 Aug 26.

UMR IAM INRA Université de Lorraine 54000 Nancy France.

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http://dx.doi.org/10.1002/ece3.2392DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5058533PMC
September 2016

Quality of life after pulmonary embolism: Prospective validation of the German version of the PEmb-QoL questionnaire.

Thromb Res 2015 Jun 9;135(6):1087-92. Epub 2015 Apr 9.

Department of General Internal Medicine, Bern University Hospital, Bern, Switzerland.

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http://dx.doi.org/10.1016/j.thromres.2015.03.031DOI Listing
June 2015

Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors.

Front Plant Sci 2014 15;5:450. Epub 2014 Sep 15.

Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1136 Institut National de la Recherche Agronomique/Université de Lorraine Interactions Arbres/Microorganismes Champenoux, France ; Université de Lorraine, Unité Mixte de Recherche 1136 Institut National de la Recherche Agronomique/Université de Lorraine Interactions Arbres/Microorganismes Vandoeuvre-lès-Nancy Cedex, France.

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http://dx.doi.org/10.3389/fpls.2014.00450DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164029PMC
October 2014

Genome-wide patterns of segregation and linkage disequilibrium: the construction of a linkage genetic map of the poplar rust fungus Melampsora larici-populina.

Front Plant Sci 2014 10;5:454. Epub 2014 Sep 10.

Interactions Arbres - Micro organismes, Institut national de la recherche agronomique, UMR1136 Champenoux, France ; Interactions Arbres - Micro organismes, Université de Lorraine, UMR1136 Vandoeuvre-lès-Nancy, France.

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http://dx.doi.org/10.3389/fpls.2014.00454DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4159982PMC
October 2014

Transcriptome analysis of poplar rust telia reveals overwintering adaptation and tightly coordinated karyogamy and meiosis processes.

Front Plant Sci 2013 21;4:456. Epub 2013 Nov 21.

INRA, UMR 1136, Interactions Arbres-Microorganismes Champenoux, France ; UMR 1136, Université de Lorraine, Interactions Arbres-Microorganismes Vandoeuvre-lès-Nancy, France.

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http://dx.doi.org/10.3389/fpls.2013.00456DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3835972PMC
December 2013

Optimization of a real-time PCR assay for the detection of the quarantine pathogen Melampsora medusae f. sp. deltoidae.

Fungal Biol 2013 Jun 19;117(6):389-98. Epub 2013 Apr 19.

ANSES Laboratoire de la Santé des Végétaux, Unité de Mycologie, IFR110 EFABA, Domaine de Pixérécourt, BP 90059, 54220 Malzéville, France.

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http://dx.doi.org/10.1016/j.funbio.2013.04.001DOI Listing
June 2013

Phylogenetic species recognition reveals host-specific lineages among poplar rust fungi.

Mol Phylogenet Evol 2013 Mar 10;66(3):628-44. Epub 2012 Nov 10.

Natural Resources Canada, Canadian Forest Service, Laurentian Forestry Centre, 1055 du PEPS, P.O. Box 10380, Stn. Sainte-Foy, Québec, QC, Canada G1V 4C7.

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http://dx.doi.org/10.1016/j.ympev.2012.10.021DOI Listing
March 2013

Strong genetic differentiation between North American and European populations of Phytophthora alni subsp. uniformis.

Phytopathology 2013 Feb;103(2):190-9

INRA, UMR1136, INRA, Université de Lorraine, Interactions Arbres- Micro- organismes, IFR110 EFABA, Centre INRA de Nancy, 54280 Champenoux, France.

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http://dx.doi.org/10.1094/PHYTO-05-12-0116-RDOI Listing
February 2013

Impact of ectomycorrhizal colonization and rust infection on the secondary metabolism of poplar (Populus trichocarpa x deltoides).

Tree Physiol 2012 Nov 12;32(11):1357-64. Epub 2012 Oct 12.

Soil Science, University of Rostock, Justus-von-Liebig-Weg 6, D-18059 Rostock, Germany.

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http://dx.doi.org/10.1093/treephys/tps093DOI Listing
November 2012

Exploring the role of asexual multiplication in poplar rust epidemics: impact on diversity and genetic structure.

Mol Ecol 2012 Oct 12;21(20):4996-5008. Epub 2012 Sep 12.

INRA, UMR1136 IAM, F-54280, Champenoux, France.

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http://dx.doi.org/10.1111/mec.12008DOI Listing
October 2012

The poplar-poplar rust interaction: insights from genomics and transcriptomics.

J Pathog 2011 26;2011:716041. Epub 2011 Oct 26.

Institut National de la Recherche Agronomique (INRA), Nancy Université, Unité Mixte de Recherche 1136, "Interactions Arbres/Micro-organismes," Centre INRA de Nancy, 54280 Champenoux, France.

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http://dx.doi.org/10.4061/2011/716041DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3335510PMC
August 2012

Disentangling the genetic origins of a plant pathogen during disease spread using an original molecular epidemiology approach.

Mol Ecol 2012 May 10;21(10):2383-98. Epub 2012 Apr 10.

INRA, Université de Lorraine, UMR1136 Interactions Arbres - Microorganismes, F-54280 Champenoux, France.

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http://dx.doi.org/10.1111/j.1365-294X.2012.05556.xDOI Listing
May 2012

Nasopharyngeal microbiota in infants with acute otitis media.

J Infect Dis 2012 Apr 20;205(7):1048-55. Epub 2012 Feb 20.

Institute for Infectious Diseases, University of Berne, Berne, Switzerland.

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http://dx.doi.org/10.1093/infdis/jis024DOI Listing
April 2012

A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust).

Mol Plant Microbe Interact 2012 Mar;25(3):279-93

Unité Mixte de Recherche 1136 Institut National de la Recherche Agronomique-Nancy Université, Interactions Arbres/Microorganismes, INRA Nancy, 54280 Champenoux, France.

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http://dx.doi.org/10.1094/MPMI-09-11-0238DOI Listing
March 2012

Laser capture microdissection of uredinia formed by Melampsora larici-populina revealed a transcriptional switch between biotrophy and sporulation.

Mol Plant Microbe Interact 2010 Oct;23(10):1275-86

Unité Mixte de Recherche 1136 INRA/Nancy Université Interactions Arbres/Micro-organismes, Champenoux, France.

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http://dx.doi.org/10.1094/MPMI-05-10-0111DOI Listing
October 2010

Development, comparison, and validation of real-time and conventional PCR tools for the detection of the fungal pathogens causing brown spot and red band needle blights of pine.

Phytopathology 2010 Jan;100(1):105-14

Laboratorie National de la protection des Végétaux, Station de mycologie, IFR 110, Domaine de Pixérécourt, Malzéville, France.

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http://dx.doi.org/10.1094/PHYTO-100-1-0105DOI Listing
January 2010

Fungal pathogen (mis-) identifications: a case study with DNA barcodes on Melampsora rusts of aspen and white poplar.

Mycol Res 2009 Jun-Jul;113(Pt 6-7):713-24. Epub 2009 Feb 26.

Laurentian Forestry Centre, Canadian Forest Service, Natural Resources Canada, 1055 du PEPS, PO Box 10380, Stn. Sainte-Foy, Québec, QC, Canada G1V 4C7.

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http://dx.doi.org/10.1016/j.mycres.2009.02.007DOI Listing
June 2009

Genetic structure of the poplar rust fungus Melampsora larici-populina: evidence for isolation by distance in Europe and recent founder effects overseas.

Infect Genet Evol 2008 Sep 20;8(5):577-87. Epub 2008 Apr 20.

INRA, Nancy-Université, UMR1136, Interactions Arbres-Microorganismes, IFR 110, F-54280 Champenoux, France.

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http://dx.doi.org/10.1016/j.meegid.2008.04.005DOI Listing
September 2008

Distribution and expression of elicitin genes in the interspecific hybrid oomycete Phytophthora alni.

Appl Environ Microbiol 2007 Sep 29;73(17):5587-97. Epub 2007 Jun 29.

INRA, Nancy-Université, UMR1136, Interactions Arbres-Microorganismes, F-54280 Champenoux, France.

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http://dx.doi.org/10.1128/AEM.00721-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2042069PMC
September 2007

Transcript profiling of poplar leaves upon infection with compatible and incompatible strains of the foliar rust Melampsora larici-populina.

Plant Physiol 2007 May 30;144(1):347-66. Epub 2007 Mar 30.

Unité Mixte de Recherche 1136 Institut National de la Recherche Agronomique, and UMR 1137 INRA/Nancy Université Ecophysiologie et Ecologie Forestières, Centre INRA de Nancy, F-54280 Champenoux, France.

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http://www.plantphysiol.org/cgi/doi/10.1104/pp.106.094987
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http://dx.doi.org/10.1104/pp.106.094987DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1913798PMC
May 2007

Genetic characterization of the natural hybrid species Phytophthora alni as inferred from nuclear and mitochondrial DNA analyses.

Fungal Genet Biol 2006 Jul 19;43(7):511-29. Epub 2006 Apr 19.

Institut National de la Recherche Agronomique, UMR1136, Pathologie Forestière, Champenoux, France.

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http://dx.doi.org/10.1016/j.fgb.2006.02.006DOI Listing
July 2006

Wettability of Poplar Leaves Influences Dew Formation and Infection by Melampsora larici-populina.

Plant Dis 2006 Feb;90(2):177-184

Institut National de la Recherche Agronomique (INRA), UMR 1136, Pathologie forestière, route de l'Arboretum, F-54280 Champenoux, France.

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http://dx.doi.org/10.1094/PD-90-0177DOI Listing
February 2006

Poplar peroxiredoxin Q. A thioredoxin-linked chloroplast antioxidant functional in pathogen defense.

Plant Physiol 2004 Mar 19;134(3):1027-38. Epub 2004 Feb 19.

Unité Mixte de Recherche Institut National de la Recherche Agronomique-Université Henri Poincaré 1136, Interactions Arbres/Micro-Organismes, Université Henri Poincaré, Faculté des Sciences, BP 239, 54506 Vandoeuvre cedex France.

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http://dx.doi.org/10.1104/pp.103.035865DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC389925PMC
March 2004