Oswaldo Trelles

Oswaldo Trelles

UNVERIFIED PROFILE

Are you Oswaldo Trelles?   Register this Author

Register author
Oswaldo Trelles

Oswaldo Trelles

Publications by authors named "Oswaldo Trelles"

Are you Oswaldo Trelles?   Register this Author

37Publications

458Reads

23Profile Views

Ultra-fast genome comparison for large-scale genomic experiments.

Sci Rep 2019 Jul 16;9(1):10274. Epub 2019 Jul 16.

Computer Architecture Department, University of Málaga - Instituto de Investigación Biomédica de Málaga-IBIMA, Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41598-019-46773-wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6635410PMC
July 2019

Combining Strengths for Multi-genome Visual Analytics Comparison.

Bioinform Biol Insights 2019 1;13:1177932218825127. Epub 2019 Feb 1.

Department of Computer Architecture, University of Málaga and Instituto de Investigación Biomédica de Málaga (IBIMA), Málaga, Spain.

View Article

Download full-text PDF

Source
http://journals.sagepub.com/doi/10.1177/1177932218825127
Publisher Site
http://dx.doi.org/10.1177/1177932218825127DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6365554PMC
February 2019

Training bioinformaticians in High Performance Computing.

Heliyon 2018 Dec 17;4(12):e01057. Epub 2018 Dec 17.

Computer Architecture Department, University of Malaga, Malaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.heliyon.2018.e01057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6299036PMC
December 2018

Precise and Parallel Pairwise Metagenomic Comparisons.

J Comput Biol 2018 08;25(8):841-849

Department of Computer Architecture, University of Malaga , Malaga, Spain .

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1089/cmb.2018.0081DOI Listing
August 2018

mORCA: ubiquitous access to life science web services.

BMC Genomics 2018 01 16;19(1):56. Epub 2018 Jan 16.

Computer Languages and Computer Science Department, University of Malaga, Bulevar Luis Pasteur 35, 29071, Malaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12864-018-4439-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5771032PMC
January 2018

Microbiome overview in swine lungs.

PLoS One 2017 18;12(7):e0181503. Epub 2017 Jul 18.

Centro de Biotecnologia, Universidade Federal de Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0181503PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5515459PMC
September 2017

Computational workflow for the fine-grained analysis of metagenomic samples.

BMC Genomics 2016 10 25;17(Suppl 8):802. Epub 2016 Oct 25.

Department of Computer Architecture, University of Málaga, Boulevard Louis Pasteur 35, Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12864-016-3063-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5088524PMC
October 2016

Transcriptomic Analysis Using Olive Varieties and Breeding Progenies Identifies Candidate Genes Involved in Plant Architecture.

Front Plant Sci 2016 2;7:240. Epub 2016 Mar 2.

Departamento de Biología Celular, Genética y Fisiología, Facultad de Ciencias, Instituto de Hortofruticultura Subtropical y Mediterránea, Universidad de Málaga - Consejo Superior de Investigaciones Científicas Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3389/fpls.2016.00240DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4773642PMC
March 2016

Breaking the computational barriers of pairwise genome comparison.

BMC Bioinformatics 2015 Aug 11;16:250. Epub 2015 Aug 11.

Computer Architecture Department, University of Malaga, Bulevar Luis Pasteur 35, Malaga, 29071, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12859-015-0679-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4531504PMC
August 2015

Computational Synteny Block: A Framework to Identify Evolutionary Events.

IEEE Trans Nanobioscience 2015 06 20;15(4):343-353. Epub 2016 Apr 20.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1109/TNB.2016.2554150DOI Listing
June 2015

Sma3s: a three-step modular annotator for large sequence datasets.

DNA Res 2014 Aug 5;21(4):341-53. Epub 2014 Feb 5.

Centro Andaluz de Biología del Desarrollo (CABD, UPO-CSIC-JA), Facultad de Ciencias Experimentales (Área de Genética), Universidad Pablo de Olavide, Sevilla 41013, Spain

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/dnares/dsu001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4131829PMC
August 2014

MAPI: a software framework for distributed biomedical applications.

J Biomed Semantics 2013 Jan 11;4(1). Epub 2013 Jan 11.

Computer Architecture Department, University of Málaga, Complejo Tecnológico, Campus de Teatinos, Málaga, 29080, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/2041-1480-4-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3558448PMC
January 2013

Genetic and genome-wide transcriptomic analyses identify co-regulation of oxidative response and hormone transcript abundance with vitamin C content in tomato fruit.

BMC Genomics 2012 May 14;13:187. Epub 2012 May 14.

Departamento Biología Molecular y Bioquímica, Instituto de Hortofruticultura Subtropical y Mediterránea, Universidad de Málaga-Consejo Superior de Investigaciones Científicas, Universidad de Málaga, 29071, Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2164-13-187DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3462723PMC
May 2012

MAPI: towards the integrated exploitation of bioinformatics Web Services.

BMC Bioinformatics 2011 Oct 27;12:419. Epub 2011 Oct 27.

Computer Architecture Department, University of Malaga, Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-12-419DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3219744PMC
October 2011

Big data, but are we ready?

Nat Rev Genet 2011 Mar 8;12(3):224. Epub 2011 Feb 8.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nrg2857-c1DOI Listing
March 2011

MOWServ: a web client for integration of bioinformatic resources.

Nucleic Acids Res 2010 Jul 4;38(Web Server issue):W671-6. Epub 2010 Jun 4.

Departamento Arquitectura de Computadores, Escuela Técnica Superior de Ingeniería Informática, Universidad de Málaga, Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkq497DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896175PMC
July 2010

jORCA: easily integrating bioinformatics Web Services.

Bioinformatics 2010 Feb 3;26(4):553-9. Epub 2010 Jan 3.

Computer Architecture Department, University of Malaga, 29071 Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btp709DOI Listing
February 2010

Magallanes: a web services discovery and automatic workflow composition tool.

BMC Bioinformatics 2009 Oct 15;10:334. Epub 2009 Oct 15.

Computer Architecture Department, University of Malaga, 29080, Malaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-10-334DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2771019PMC
October 2009

PreP+07: improvements of a user friendly tool to preprocess and analyse microarray data.

BMC Bioinformatics 2009 Jan 12;10:16. Epub 2009 Jan 12.

Computer Architecture Department, University of Málaga, Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-10-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2657788PMC
January 2009

Supervised Lowess normalization of comparative genome hybridization data--application to lactococcal strain comparisons.

BMC Bioinformatics 2008 Feb 11;9:93. Epub 2008 Feb 11.

Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands.

View Article

Download full-text PDF

Source
http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
Publisher Site
http://dx.doi.org/10.1186/1471-2105-9-93DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2275246PMC
February 2008

Saturation and quantization reduction in microarray experiments using two scans at different sensitivities.

Stat Appl Genet Mol Biol 2004 8;3:Article11. Epub 2004 Jun 8.

Dept. Computer Architecture, University of Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.2202/1544-6115.1057DOI Listing
May 2006

A new user-friendly software platform for systematic classification of skin lesions to aid in their diagnosis and prognosis.

Lasers Med Sci 2006 Apr 18;21(1):54-60. Epub 2006 Mar 18.

Electronic Department, University of Málaga, Campus de Teatinos, 29071, Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s10103-006-0370-5DOI Listing
April 2006

Treatment effects of combined radio-frequency current and a 900 nm diode laser on leg blood vessels.

Lasers Surg Med 2006 Mar;38(3):185-95

Instituto Médico Vilafortuny/Fundación Antoni de Gimbernat, Cambrils, Tarragona, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/lsm.20280DOI Listing
March 2006

The 800-nm diode laser in the treatment of leg veins: assessment at 6 months.

J Am Acad Dermatol 2006 Feb;54(2):282-9

Instituto Médico Vilafortuny/Fundación Antoni de Gimbernat, Cambrils, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jaad.2005.09.009DOI Listing
February 2006

Integrated analysis of gene expression by Association Rules Discovery.

BMC Bioinformatics 2006 Feb 7;7:54. Epub 2006 Feb 7.

BioComputing Unit, National Center for Biotechnology (CNB-CSIC), Cantoblanco, 28049, Madrid, Spain.

View Article

Download full-text PDF

Source
http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
Publisher Site
http://dx.doi.org/10.1186/1471-2105-7-54DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1386712PMC
February 2006

Intelligent client for integrating bioinformatics services.

Bioinformatics 2006 Jan 27;22(1):106-11. Epub 2005 Oct 27.

Integrated Bioinformatics (GNV5) at the University of Málaga, National Institute for Bioinformatics (INB), Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/bti740DOI Listing
January 2006

MicroPreP: a cDNA microarray data pre-processing framework.

Appl Bioinformatics 2003 ;2(4):241-4

Molecular Genetics, University of Groningen, Groningen Biomolecular Sciences and Biotechnology Institute, Haren, The Netherlands.

View Article

Download full-text PDF

Source
June 2004

PreP: gene expression data pre-processing.

Bioinformatics 2003 Nov;19(17):2328-9

Computer Architecture Department, Universidad de Málaga, 29080, Málaga, Spain and Department of Molecular Genetics, University of Groningen, The Netherlands.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btg318DOI Listing
November 2003

Engene: the processing and exploratory analysis of gene expression data.

Bioinformatics 2003 Mar;19(5):657-8

Computer Architecture Department, Universidad de Málaga, 29080 Málaga, Spain.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btg028DOI Listing
March 2003