Olivier Sand

Olivier Sand

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Olivier Sand

Olivier Sand

Publications by authors named "Olivier Sand"

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RSAT 2015: Regulatory Sequence Analysis Tools.

Nucleic Acids Res 2015 Jul 22;43(W1):W50-6. Epub 2015 Apr 22.

European Genomic Institute for Diabetes (EGID), F-3508, 59000 Lille, France Laboratoire de Bioinformatique des Génomes et des Réseaux (BiGRe), Université Libre de Bruxelles, Campus Plaine, CP 263, Bld du Triomphe, B-1050 Bruxelles, Belgium

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http://dx.doi.org/10.1093/nar/gkv362DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489296PMC
July 2015

TMEM240 mutations cause spinocerebellar ataxia 21 with mental retardation and severe cognitive impairment.

Brain 2014 Oct 28;137(Pt 10):2657-63. Epub 2014 Jul 28.

2 Institut National de la Santé et de la Recherche Médicale, INSERM U837, and Université de Lille Nord de France, F-59045, Lille, France 4 Pôle de Biochimie et Biologie moléculaire, Centre de Biologie-Pathologie, Centre Hospitalier Régional et Universitaire de Lille, F-59037, Lille, France

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http://dx.doi.org/10.1093/brain/awu202DOI Listing
October 2014

Novel LEPR mutations in obese Pakistani children identified by PCR-based enrichment and next generation sequencing.

Obesity (Silver Spring) 2014 Apr 9;22(4):1112-7. Epub 2013 Dec 9.

Department of Genomics of Common Disease, Imperial College London, London, UK.

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http://dx.doi.org/10.1002/oby.20667DOI Listing
April 2014

RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets.

Nucleic Acids Res 2012 Feb 8;40(4):e31. Epub 2011 Dec 8.

Department of Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Ihnestrasse 73, Berlin 14195, Germany.

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http://dx.doi.org/10.1093/nar/gkr1104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3287167PMC
February 2012

RSAT 2011: regulatory sequence analysis tools.

Nucleic Acids Res 2011 Jul;39(Web Server issue):W86-91

Department of Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195 Berlin, Germany.

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http://dx.doi.org/10.1093/nar/gkr377DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125777PMC
July 2011

Retrieve-ensembl-seq: user-friendly and large-scale retrieval of single or multi-genome sequences from Ensembl.

Bioinformatics 2009 Oct 31;25(20):2739-40. Epub 2009 Aug 31.

Laboratoire de Bioinformatique des Génomes et des Réseaux (BiGRe), Université Libre de Bruxelles CP 263, Campus Plaine, Boulevard du Triomphe, B-1050 Bruxelles, Belgium.

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http://dx.doi.org/10.1093/bioinformatics/btp519DOI Listing
October 2009

Integrating sequence, evolution and functional genomics in regulatory genomics.

Genome Biol 2009 30;10(1):202. Epub 2009 Jan 30.

Computational Molecular Biology, Max-Planck-Institut für molekulare Genetik, Berlin, Germany.

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http://dx.doi.org/10.1186/gb-2009-10-1-202DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2687781PMC
September 2009

Using RSAT oligo-analysis and dyad-analysis tools to discover regulatory signals in nucleic sequences.

Nat Protoc 2008 ;3(10):1589-603

Laboratoire de Bioinformatique des Génomes et des Réseaux (BiGRe), Université Libre de Bruxelles, Campus Plaine, CP 263, Boulevard du Triomphe, Bruxelles, Belgium.

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http://dx.doi.org/10.1038/nprot.2008.98DOI Listing
December 2008

Analyzing multiple data sets by interconnecting RSAT programs via SOAP Web services: an example with ChIP-chip data.

Nat Protoc 2008 ;3(10):1604-15

Laboratoire de Bioinformatique des Génomes et des Réseaux (BiGRe), Université Libre de Bruxelles, Campus Plaine, CP 263, Boulevard du Triomphe, Bruxelles, Belgium.

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http://dx.doi.org/10.1038/nprot.2008.99DOI Listing
December 2008

RSAT: regulatory sequence analysis tools.

Nucleic Acids Res 2008 Jul 21;36(Web Server issue):W119-27. Epub 2008 May 21.

Laboratoire de Bioinformatique des Génomes et des Réseaux (BiGRe), Université Libre de Bruxelles, Campus Plaine, CP 263. Bld du Triomphe, B-1050 Bruxelles, Belgium.

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https://pdfs.semanticscholar.org/728e/ec8524ddbec8683455ca50
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http://nar.oxfordjournals.org/lookup/doi/10.1093/nar/gkn304
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http://dx.doi.org/10.1093/nar/gkn304DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447775PMC
July 2008

NeAT: a toolbox for the analysis of biological networks, clusters, classes and pathways.

Nucleic Acids Res 2008 Jul 4;36(Web Server issue):W444-51. Epub 2008 Jun 4.

Laboratoire de Bioinformatique des Génomes et Réseaux (BiGRE), Université Libre de Bruxelles (ULB), Boulevard du Triomphe, CP263, B-1050 Bruxelles, Belgium.

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http://dx.doi.org/10.1093/nar/gkn336DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447721PMC
July 2008

Discovery of motifs in promoters of coregulated genes.

Methods Mol Biol 2007 ;395:329-48

Service de Conformation des Macromolécules, Biologiques et de Bioinformatiques, Université Libre de Bruxelles, Belgium.

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http://dx.doi.org/10.1007/978-1-59745-514-5_21DOI Listing
March 2008

Fine-tuning enhancer models to predict transcriptional targets across multiple genomes.

PLoS One 2007 Nov 7;2(11):e1115. Epub 2007 Nov 7.

Laboratory of Neurogenetics, Department of Molecular and Developmental Genetics, Vlaams Instituut voor Biotechnologie (VIB), Leuven, Belgium.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0001115PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2047340PMC
November 2007

Phenotypic characterization of overexpression or deletion of the Escherichia coli crcA, cspE and crcB genes.

Microbiology 2003 Aug;149(Pt 8):2107-17

Laboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892-4255, USA.

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http://dx.doi.org/10.1099/mic.0.26363-0DOI Listing
August 2003