Obata Yuichi

Obata Yuichi

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Obata Yuichi

Obata Yuichi

Publications by authors named "Obata Yuichi"

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Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles: a multi-center evaluation.

Authors:
Channabasavaiah B Gurumurthy Aidan R O'Brien Rolen M Quadros John Adams Pilar Alcaide Shinya Ayabe Johnathan Ballard Surinder K Batra Marie-Claude Beauchamp Kathleen A Becker Guillaume Bernas David Brough Francisco Carrillo-Salinas Wesley Chan Hanying Chen Ruby Dawson Victoria DeMambro Jinke D'Hont Katharine M Dibb James D Eudy Lin Gan Jing Gao Amy Gonzales Anyonya R Guntur Huiping Guo Donald W Harms Anne Harrington Kathryn E Hentges Neil Humphreys Shiho Imai Hideshi Ishii Mizuho Iwama Eric Jonasch Michelle Karolak Bernard Keavney Nay-Chi Khin Masamitsu Konno Yuko Kotani Yayoi Kunihiro Imayavaramban Lakshmanan Catherine Larochelle Catherine B Lawrence Lin Li Volkhard Lindner Xian-De Liu Gloria Lopez-Castejon Andrew Loudon Jenna Lowe Loydie A Jerome-Majewska Taiji Matsusaka Hiromi Miura Yoshiki Miyasaka Benjamin Morpurgo Katherine Motyl Yo-Ichi Nabeshima Koji Nakade Toshiaki Nakashiba Kenichi Nakashima Yuichi Obata Sanae Ogiwara Mariette Ouellet Leif Oxburgh Sandra Piltz Ilka Pinz Moorthy P Ponnusamy David Ray Ronald J Redder Clifford J Rosen Nikki Ross Mark T Ruhe Larisa Ryzhova Ane M Salvador Sabrina Shameen Alam Radislav Sedlacek Karan Sharma Chad Smith Katrien Staes Lora Starrs Fumihiro Sugiyama Satoru Takahashi Tomohiro Tanaka Andrew W Trafford Yoshihiro Uno Leen Vanhoutte Frederique Vanrockeghem Brandon J Willis Christian S Wright Yuko Yamauchi Xin Yi Kazuto Yoshimi Xuesong Zhang Yu Zhang Masato Ohtsuka Satyabrata Das Daniel J Garry Tino Hochepied Paul Thomas Jan Parker-Thornburg Antony D Adamson Atsushi Yoshiki Jean-Francois Schmouth Andrei Golovko William R Thompson K C Kent Lloyd Joshua A Wood Mitra Cowan Tomoji Mashimo Seiya Mizuno Hao Zhu Petr Kasparek Lucy Liaw Joseph M Miano Gaetan Burgio

Genome Biol 2019 08 26;20(1):171. Epub 2019 Aug 26.

Department of Immunology and Infectious Disease, The John Curtin School of Medical Research, the Australian National University, Canberra, Australia.

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http://dx.doi.org/10.1186/s13059-019-1776-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6709553PMC
August 2019

Distinct Neural Circuits for the Formation and Retrieval of Episodic Memories.

Cell 2017 Aug 17;170(5):1000-1012.e19. Epub 2017 Aug 17.

RIKEN-MIT Center for Neural Circuit Genetics at the Picower Institute for Learning and Memory, Department of Biology and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; RIKEN Brain Science Institute, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2017.07.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5586038PMC
August 2017

An easy method for preparation of Cre-loxP regulated fluorescent adenoviral expression vectors and its application for direct reprogramming into hepatocytes.

Biotechnol Rep (Amst) 2016 Dec 6;12:26-32. Epub 2016 Oct 6.

Gene Engineering Division, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1016/j.btre.2016.10.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5361070PMC
December 2016

NIG_MoG: a mouse genome navigator for exploring intersubspecific genetic polymorphisms.

Mamm Genome 2015 Aug 27;26(7-8):331-7. Epub 2015 May 27.

Mammalian Genetics Laboratory, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka, 411-8540, Japan,

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http://dx.doi.org/10.1007/s00335-015-9569-8DOI Listing
August 2015

Egress of mature murine regulatory T cells from the thymus requires RelA.

J Immunol 2015 Apr 27;194(7):3020-8. Epub 2015 Feb 27.

Technology and Development Team for BioSignal Program, RIKEN BioResource Center, Ibaraki 305-0074, Japan;

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http://dx.doi.org/10.4049/jimmunol.1302756DOI Listing
April 2015

NF-κB RELA-deficient bone marrow macrophages fail to support bone formation and to maintain the hematopoietic niche after lethal irradiation and stem cell transplantation.

Int Immunol 2014 Nov 7;26(11):607-18. Epub 2014 Jun 7.

Technology and Development Team for BioSignal Program, RIKEN BioResource Center, RIKEN Institute, Tsukuba 305-074, Japan.

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http://dx.doi.org/10.1093/intimm/dxu062DOI Listing
November 2014

p100, a precursor of NF-κB2, inhibits c-Rel and reduces the expression of IL-23 in dendritic cells.

Biochem Biophys Res Commun 2014 Oct 8;453(3):332-7. Epub 2014 Oct 8.

Technology and Development Team for BioSignal Program, Subteam for BioSignal Integration, RIKEN BioResource Center, RIKEN Tsukuba Institute, 3-1-1 Koyadai, Tsukuba 305-0074, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2014.09.143DOI Listing
October 2014

Cell type-specific genetic and optogenetic tools reveal hippocampal CA2 circuits.

Nat Neurosci 2014 Feb 15;17(2):269-79. Epub 2013 Dec 15.

RIKEN-MIT Center for Neural Circuit Genetics at the Picower Institute for Learning and Memory, Department of Biology and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1038/nn.3614DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4004172PMC
February 2014

Prostate cancer progression correlates with increased humoral immune response to a human endogenous retrovirus GAG protein.

Clin Cancer Res 2013 Nov 30;19(22):6112-25. Epub 2013 Sep 30.

Authors' Affiliations: Ludwig Institute for Cancer Research, New York Branch at Memorial Sloan-Kettering Cancer Center; Departments of Surgery, Medicine, Pathology, Biostatistics, and Immunology, Memorial Sloan-Kettering Cancer Center; NYU Langone Medical Center, New York; Department of Immunology, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Okayama; RIKEN Bioresource Center, Tsukuba, Ibaraki, Japan; and Klinik für Onkologie und Hämatologie, Krankenhaus Nordwest, Frankfurt, Germany.

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http://dx.doi.org/10.1158/1078-0432.CCR-12-3580DOI Listing
November 2013

Induction of cardiomyocyte-like cells in infarct hearts by gene transfer of Gata4, Mef2c, and Tbx5.

Circ Res 2012 Oct 28;111(9):1147-56. Epub 2012 Aug 28.

Department of Clinical and Molecular Cardiovascular Research, Department of Cardiology, Keio University School of Medicine, Tokyo, Japan.

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http://dx.doi.org/10.1161/CIRCRESAHA.112.271148DOI Listing
October 2012

Centralized mouse repositories.

Mamm Genome 2012 Oct 4;23(9-10):559-71. Epub 2012 Sep 4.

Mutant Mouse Regional Resource Center (MMRRC), The Jackson Laboratory, Bar Harbor, ME, USA.

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http://dx.doi.org/10.1007/s00335-012-9420-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3709583PMC
October 2012

EpCAM- and EGFR-targeted selective gene therapy for biliary cancers using Z33-fiber-modified adenovirus.

Int J Cancer 2011 Sep 6;129(5):1244-53. Epub 2011 Jan 6.

Division of Gastroenterology, University of Tsukuba Graduate School of Comprehensive Human Sciences, Tsukuba, Ibaraki 305-8575, Japan.

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http://dx.doi.org/10.1002/ijc.25758DOI Listing
September 2011

Introduction to the Japan Mouse Clinic at the RIKEN BioResource Center.

Exp Anim 2009 Oct;58(5):443-50

Technology and Development Team for Mouse Phenotype Analysis, RIKEN BioResource Center, Tsukuba City, Ibaraki, Japan.

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http://dx.doi.org/10.1538/expanim.58.443DOI Listing
October 2009

Simultaneous detection of multiple transgenes for genetically-modified mouse strains.

Exp Anim 2009 Jul;58(4):437-42

Experimental Animal Division, RIKEN BioResource Center, Koyadai,Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1538/expanim.58.437DOI Listing
July 2009

The NF-kappaB RelA subunit confers resistance to Leishmania major by inducing nitric oxide synthase 2 and Fas expression but not Th1 differentiation.

J Immunol 2009 Apr;182(8):4910-6

Technology and Development Team for BioSignal Program, Subteam for BioSignal Integration, RIKEN BioResource Center, RIKEN Tsukuba Institute, Tsukuba, Japan.

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http://dx.doi.org/10.4049/jimmunol.0800967DOI Listing
April 2009

Genetic differences among C57BL/6 substrains.

Exp Anim 2009 Apr;58(2):141-9

RIKEN BioResource Center, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1538/expanim.58.141DOI Listing
April 2009

Establishment of germline-competent embryonic stem cell lines from the MSM/Ms strain.

Mamm Genome 2009 Jan 12;20(1):14-20. Epub 2008 Dec 12.

Department of Developmental Genetics, Institute of Molecular Embryology and Genetics, Kumamoto University, Honjo 2-2-1, Kumamoto, 860-0811, Japan.

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http://dx.doi.org/10.1007/s00335-008-9160-7DOI Listing
January 2009

Identification of the HERV-K gag antigen in prostate cancer by SEREX using autologous patient serum and its immunogenicity.

Cancer Immun 2008 Nov 13;8:15. Epub 2008 Nov 13.

Department of Immunology, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, 2-5-1 Shikata-cho, Okayama 700-8558, Japan.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935773PMC
November 2008

Phosphorylation of two eukaryotic transcription factors, Jun dimerization protein 2 and activation transcription factor 2, in Escherichia coli by Jun N-terminal kinase 1.

Anal Biochem 2008 May 6;376(1):115-21. Epub 2008 Feb 6.

Gene Engineering Division, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1016/j.ab.2008.01.038DOI Listing
May 2008

Genes encoded within 8q24 on the amplicon of a large extrachromosomal element are selectively repressed during the terminal differentiation of HL-60 cells.

Mutat Res 2008 Apr 28;640(1-2):97-106. Epub 2007 Dec 28.

Life Science Group, Graduate School of Integrated Arts and Sciences, Hiroshima University, 1-7-1 Kagamiyama, Higashihiroshima, Hiroshima 739-8521, Japan.

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http://dx.doi.org/10.1016/j.mrfmmm.2007.12.008DOI Listing
April 2008

A proximal kappaB site in the IL-23 p19 promoter is responsible for RelA- and c-Rel-dependent transcription.

J Immunol 2007 Nov;179(10):6596-603

Technology and Development Team for BioSignal Program, Subteam for BioSignal Integration, RIKEN BioResource Center, RIKEN Tsukuba Institute, Tsukuba, Japan.

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http://dx.doi.org/10.4049/jimmunol.179.10.6596DOI Listing
November 2007

Spermatozoa and spermatids retrieved from frozen reproductive organs or frozen whole bodies of male mice can produce normal offspring.

Proc Natl Acad Sci U S A 2006 Aug 18;103(35):13098-103. Epub 2006 Aug 18.

Institute of Physical and Chemical Research RIKEN Bioresource Center, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1073/pnas.0605755103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1550775PMC
August 2006

Characterization of murine CD160+ CD8+ T lymphocytes.

Immunol Lett 2006 Jul 11;106(1):48-56. Epub 2006 May 11.

Division of Immunology, Aichi Cancer Center Research Institute, Nagoya, Japan.

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http://dx.doi.org/10.1016/j.imlet.2006.04.006DOI Listing
July 2006

Essential role for gene profiling analysis in the authentication of human cell lines.

Hum Cell 2006 Feb;19(1):43-8

Cell Engineering Division, RIKEN BioResource Center, Ibaraki, Japan.

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http://dx.doi.org/10.1111/j.1749-0774.2005.00007.xDOI Listing
February 2006

Accumulation of infectious mutants in stocks during the propagation of fiber-modified recombinant adenoviruses.

Biochem Biophys Res Commun 2005 Nov 28;337(3):806-14. Epub 2005 Sep 28.

Gene Engineering Division, Department of Biological Systems, BioResource Center, Tsukuba Institute, RIKEN The Institute of Physical and Chemical Research, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2005.09.112DOI Listing
November 2005

A database of recombinant viruses and recombinant viral vectors available from the RIKEN DNA bank.

J Gene Med 2005 Sep;7(9):1148-57

Gene Engineering Division, RIKEN BioResource Center, RIKEN (The Institute of Physical & Chemical Research), 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1002/jgm.786DOI Listing
September 2005

Purification of infectious adenovirus in two hours by ultracentrifugation and tangential flow filtration.

Biochem Biophys Res Commun 2005 Jun;331(4):1053-60

Gene Engineering Division, BioResource Center, Tsukuba Institute, RIKEN (The Institute of Physical and Chemical Research), 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2005.03.227DOI Listing
June 2005

Transient strong reduction of PTEN expression by specific RNAi induces loss of adhesion of the cells.

Biochem Biophys Res Commun 2005 Mar;328(4):1034-42

Technology and Development Team for BioSignal Program, Subteam for BioSignal Integration, RIKEN Bioresource Center, RIKEN Tsukuba Institute, 3-1-1 Koyadai Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2005.01.066DOI Listing
March 2005

Thymus-leukemia antigen (TL) as a major histocompatibility complex (MHC) class Ib molecule and tumor-specific antigen.

Cancer Sci 2004 Jun;95(6):469-74

Division of Immunology and Director, Aichi Cancer Center Research Institute, Chikusa-ku, Nagoya 464-8681, Japan.

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http://dx.doi.org/10.1111/j.1349-7006.2004.tb03234.xDOI Listing
June 2004

Expression of cancer/testis (CT) antigens in lung cancer.

Lung Cancer 2003 Oct;42(1):23-33

Division of Immunology, Aichi Cancer Center Research Institute, 1-1, Kanokoden, Chikusa-ku, Nagoya, Aichi 464-8681, Japan.

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http://dx.doi.org/10.1016/s0169-5002(03)00244-7DOI Listing
October 2003

Immunomic analysis of human sarcoma.

Proc Natl Acad Sci U S A 2003 Mar 24;100(5):2651-6. Epub 2003 Feb 24.

Ludwig Institute for Cancer Research, New York Branch at Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, New York, NY 10021, USA. .

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http://www.pnas.org/content/100/5/2651.full.pdf
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http://www.pnas.org/cgi/doi/10.1073/pnas.0437972100
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http://dx.doi.org/10.1073/pnas.0437972100DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC151395PMC
March 2003

Repression of bleomycin-induced pneumopathy by TNF.

J Immunol 2003 Jan;170(1):567-74

Second Department of Internal Medicine, Nagasaki University School of Medicine, Nagasaki, Japan.

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http://dx.doi.org/10.4049/jimmunol.170.1.567DOI Listing
January 2003

Isolation of embryonic stem-like cells from equine blastocysts and their differentiation in vitro.

FEBS Lett 2002 Nov;531(3):389-96

Gene Engineering Division, BioResource Center, RIKEN, Tsukuba, 305-0074, Ibaraki, Japan.

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http://dx.doi.org/10.1016/s0014-5793(02)03550-0DOI Listing
November 2002

NF-kappaB is required for CD38-mediated induction of C(gamma)1 germline transcripts in murine B lymphocytes.

Int Immunol 2002 Sep;14(9):1055-64

Division of Immunology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Japan.

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http://dx.doi.org/10.1093/intimm/dxf072DOI Listing
September 2002

Tumor-infiltrating B lymphocytes as a potential source of identifying tumor antigen in human lung cancer.

Cancer Res 2002 Mar;62(6):1751-6

Second Department of Surgery, School of Medicine, University of Occupational and Environmental Health, Japan.

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March 2002