Nikola S Müller

Nikola S Müller

UNVERIFIED PROFILE

Are you Nikola S Müller?   Register this Author

Register author
Nikola S Müller

Nikola S Müller

Publications by authors named "Nikola S Müller"

Are you Nikola S Müller?   Register this Author

27Publications

633Reads

23Profile Views

Single-cell RNA-seq denoising using a deep count autoencoder.

Nat Commun 2019 01 23;10(1):390. Epub 2019 Jan 23.

Institute of Computational Biology, Helmholtz Zentrum München, Neuherberg, Germany.

View Article

Download full-text PDF

Source
http://www.nature.com/articles/s41467-018-07931-2
Publisher Site
http://dx.doi.org/10.1038/s41467-018-07931-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6344535PMC
January 2019

Copy number aberrations from Affymetrix SNP 6.0 genotyping data-how accurate are commonly used prediction approaches?

Brief Bioinform 2018 Oct 23. Epub 2018 Oct 23.

Research Unit Radiation Cytogenetics, Helmholtz Zentrum München, Neuherberg, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bib/bby096DOI Listing
October 2018

netReg: network-regularized linear models for biological association studies.

Bioinformatics 2018 03;34(5):896-898

Institute of Computational Biology, Helmholtz Zentrum München, 85764 Neuherberg, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btx677DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6030897PMC
March 2018

Reply.

J Allergy Clin Immunol 2017 03 26;139(3):1065-1066. Epub 2016 Oct 26.

ZAUM - Center of Allergy and Environment, Technical University and Helmholtz Center Munich, Member of the German Center for Lung Research (DZL), Munich, Germany. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jaci.2016.08.024DOI Listing
March 2017

A computational model to predict severity of atopic eczema from 30 serum proteins.

J Allergy Clin Immunol 2016 10 13;138(4):1207-1210.e2. Epub 2016 May 13.

ZAUM - Center of Allergy and Environment, Technische Universität and Helmholtz Center Munich, Member of the German Center for Lung Research (DZL), Munich, Germany. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jaci.2016.04.018DOI Listing
October 2016

miTALOS v2: Analyzing Tissue Specific microRNA Function.

PLoS One 2016 21;11(3):e0151771. Epub 2016 Mar 21.

Institute of Computational Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0151771PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4801359PMC
August 2016

The global gene expression profile of the secondary transition during pancreatic development.

Mech Dev 2016 Feb 28;139:51-64. Epub 2015 Nov 28.

Institute of Diabetes and Regeneration Research, Institute of Stem Cell Research, Helmholtz Zentrum München, Business Campus Garching, Parkring 11, 85748 Garching, Germany; German Center for Diabetes Research (DZD), Ingolstädter Landstraße 1, 85764 Neuherberg, Germany; Faculty of Medicine, Technische Universität München, Ismaninger Str. 22, 81675 München, Germany. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.mod.2015.11.004DOI Listing
February 2016

MicroRNA-Target Network Inference and Local Network Enrichment Analysis Identify Two microRNA Clusters with Distinct Functions in Head and Neck Squamous Cell Carcinoma.

Int J Mol Sci 2015 Dec 18;16(12):30204-22. Epub 2015 Dec 18.

Institute of Computational Biology, Helmholtz Zentrum München, Ingolstädter Landstr. 1, 85764 Neuherberg, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3390/ijms161226230DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691172PMC
December 2015

Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data.

Bioinformatics 2015 Jun;31(12):i89-96

Institute of Computational Biology, Helmholtz Zentrum München, 85764 Neuherberg, Germany and Department of Mathematics, Technical University Munich, 85747 Garching, Germany Institute of Computational Biology, Helmholtz Zentrum München, 85764 Neuherberg, Germany and Department of Mathematics, Technical University Munich, 85747 Garching, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btv257DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765871PMC
June 2015

RAMONA: a Web application for gene set analysis on multilevel omics data.

Bioinformatics 2015 Jan 18;31(1):128-30. Epub 2014 Sep 18.

Institute of Computational Biology, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany and Department of Mathematics, Technische Universität München, Boltzmannstraße 3, 85747 Garching, Germany Institute of Computational Biology, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany and Department of Mathematics, Technische Universität München, Boltzmannstraße 3, 85747 Garching, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btu610DOI Listing
January 2015

A modular framework for gene set analysis integrating multilevel omics data.

Nucleic Acids Res 2013 Nov 23;41(21):9622-33. Epub 2013 Aug 23.

Institute of Computational Biology, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany and Department of Mathematics, Technische Universität München, Boltzmannstraße 3, 85747 Garching, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkt752DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3834824PMC
November 2013

From mosaic to patchwork: matching lipids and proteins in membrane organization.

Mol Membr Biol 2012 Aug 18;29(5):186-96. Epub 2012 May 18.

Cellular Dynamics and Cell Patterning, Max Planck Institute of Biochemistry, Martinsried, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3109/09687688.2012.687461DOI Listing
August 2012

Patchwork organization of the yeast plasma membrane into numerous coexisting domains.

Nat Cell Biol 2012 Apr 29;14(6):640-8. Epub 2012 Apr 29.

Cellular Dynamics and Cell Patterning, Max Planck Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/ncb2487DOI Listing
April 2012

Phenome-transcriptome correlation unravels anxiety and depression related pathways.

J Psychiatr Res 2011 Jul 20;45(7):973-9. Epub 2011 Jan 20.

Max Planck Institute of Psychiatry, Proteomics and Biomarkers, 80804 Munich, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jpsychires.2010.12.010DOI Listing
July 2011

Interrogation of MS/MS search data with an pI Filter algorithm to increase protein identification success.

Electrophoresis 2007 Jun;28(12):1867-74

Max Planck Institute of Psychiatry, Munich, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/elps.200700022DOI Listing
June 2007