Nicole Vasilevsky

Nicole Vasilevsky

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Nicole Vasilevsky

Nicole Vasilevsky

Publications by authors named "Nicole Vasilevsky"

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27Publications

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Effect of impact factor and discipline on journal data sharing policies.

Account Res 2019 04 25;26(3):139-156. Epub 2019 Mar 25.

e OHSU Library , Oregon Health & Science University , Portland , OR , USA.

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http://dx.doi.org/10.1080/08989621.2019.1591277DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6533124PMC
April 2019

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.

Nucleic Acids Res 2019 Jan;47(D1):D1018-D1027

Monarch Initiative, monarchinitiative.org.

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https://academic.oup.com/nar/advance-article/doi/10.1093/nar
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http://dx.doi.org/10.1093/nar/gky1105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6324074PMC
January 2019

Reproducible and reusable research: are journal data sharing policies meeting the mark?

PeerJ 2017 25;5:e3208. Epub 2017 Apr 25.

OHSU Library, Oregon Health & Science University, Portland, OR, United States.

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http://dx.doi.org/10.7717/peerj.3208DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5407277PMC
April 2017

Reproducibility and conflicts in immune epitope data.

Immunology 2016 Mar 5;147(3):349-54. Epub 2016 Feb 5.

Division of Vaccine Discovery, La Jolla Institute for Allergy & Immunology, La Jolla, CA, USA.

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http://dx.doi.org/10.1111/imm.12566DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4754615PMC
March 2016

The Resource Identification Initiative: A Cultural Shift in Publishing.

J Comp Neurol 2016 Jan;524(1):8-22

Oregon Health & Science University (OHSU) Library, Department of Medical Informatics & Clinical Epidemiology, Portland, Oregon, USA.

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http://dx.doi.org/10.1002/cne.23913DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4684178PMC
January 2016

The Resource Identification Initiative: a cultural shift in publishing.

Brain Behav 2016 01 8;6(1):e00417. Epub 2015 Dec 8.

Department of Medical Informatics & Clinical Epidemiology OHSU Library Oregon Health and Science University 3181 SW Sam Jackson Park Road Portland, Oregon 97239 USA.

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http://dx.doi.org/10.1002/brb3.417DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4834942PMC
January 2016

Disease insights through cross-species phenotype comparisons.

Mamm Genome 2015 Oct 20;26(9-10):548-55. Epub 2015 Jun 20.

Skarnes Faculty Group, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.

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http://dx.doi.org/10.1007/s00335-015-9577-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602072PMC
October 2015

The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease.

Am J Hum Genet 2015 Jul 25;97(1):111-24. Epub 2015 Jun 25.

Institute for Medical and Human Genetics, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany; Max Planck Institute for Molecular Genetics, Ihnestrasse 63-73, 14195 Berlin, Germany; Berlin Brandenburg Center for Regenerative Therapies, Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany; Institute of Bioinformatics, Department of Mathematics and Computer Science, Freie Universität Berlin, Takustrasse 9, 14195 Berlin, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2015.05.020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572507PMC
July 2015

Curriculum Development of a Research Laboratory Methodology Course for Complementary and Integrative Medicine Students.

Med Sci Educ 2015 Jun 17;25(2):171-175. Epub 2015 Mar 17.

Helfgott Research Institute, National College of Natural Medicine, 049 SW Porter Street, Portland, OR 97201.

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http://dx.doi.org/10.1007/s40670-015-0113-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4613786PMC
June 2015

Ontology based molecular signatures for immune cell types via gene expression analysis.

BMC Bioinformatics 2013 Aug 30;14:263. Epub 2013 Aug 30.

Department of Neurology, University at Buffalo School of Medicine and Biomedical Sciences, 100 High Street, Buffalo, NY 14203, USA.

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http://dx.doi.org/10.1186/1471-2105-14-263DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3844401PMC
August 2013

Dealing with data: a case study on information and data management literacy.

PLoS Biol 2012 29;10(5):e1001339. Epub 2012 May 29.

Library, Oregon Health & Science University, Portland, Oregon, USA.

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http://dx.doi.org/10.1371/journal.pbio.1001339DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3362643PMC
August 2012

Research resources: curating the new eagle-i discovery system.

Database (Oxford) 2012 20;2012:bar067. Epub 2012 Mar 20.

Oregon Health & Science University, Library, LIB, 3181 S.W. Sam Jackson Park Rd., Portland, OR 97239-3098, USA.

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http://dx.doi.org/10.1093/database/bar067DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308157PMC
June 2012

OX40 engagement stabilizes Mxd4 and Mnt protein levels in antigen-stimulated T cells leading to an increase in cell survival.

Eur J Immunol 2011 Apr 14;41(4):1024-34. Epub 2011 Mar 14.

Earle A. Chiles Research Institute, Providence Portland Medical Center, Portland, OR 97213-2933, USA.

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http://dx.doi.org/10.1002/eji.201040449DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3575515PMC
April 2011