Nicolas Ray

Nicolas Ray

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Nicolas Ray

Nicolas Ray

Publications by authors named "Nicolas Ray"

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Snakebite and its impact in rural communities: The need for a One Health approach.

PLoS Negl Trop Dis 2019 Sep 26;13(9):e0007608. Epub 2019 Sep 26.

Institute of Global Health, Faculty of Medicine, University of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.1371/journal.pntd.0007608DOI Listing
September 2019

SPLATCHE3: simulation of serial genetic data under spatially explicit evolutionary scenarios including long-distance dispersal.

Bioinformatics 2019 May 11. Epub 2019 May 11.

Institute of Global Health, GeoHealth group, University of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btz311DOI Listing
May 2019

Wet Markets and Food Safety: TripAdvisor for Improved Global Digital Surveillance.

JMIR Public Health Surveill 2019 Apr 1;5(2):e11477. Epub 2019 Apr 1.

Institute of Global Health, Faculty of Medicine, University of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.2196/11477DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6462893PMC
April 2019

Consequences of diverse evolutionary processes on american genetic gradients of modern humans.

Heredity (Edinb) 2018 12 18;121(6):548-556. Epub 2018 Jul 18.

Department of Biochemistry, Genetics and Immunology, University of Vigo, Vigo, Spain.

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http://dx.doi.org/10.1038/s41437-018-0122-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221893PMC
December 2018

High contamination in the areas surrounding abandoned mines and mining activities: An impact assessment of the Dilala, Luilu and Mpingiri Rivers, Democratic Republic of the Congo.

Chemosphere 2018 Jan 21;191:1008-1020. Epub 2017 Oct 21.

University of Kinshasa, Faculty of Science, Department of Chemistry, B.P. 190, Kinshasa XI, Democratic Republic of the Congo; University of Geneva, Faculty of Science, Department F.-A. Forel for environmental and Aquatic Sciences, And Institute for Environmental Sciences, 66, Boulevard Carl-Vogt, CH-1205, Geneva, Switzerland; Université Pédagogique Nationale (UPN), Croisement Route de Matadi et Avenue de la Libération, Quartier Binza/UPN, B.P. 8815 Kinshasa, Democratic Republic of the Congo. Electronic address:

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http://dx.doi.org/10.1016/j.chemosphere.2017.10.052DOI Listing
January 2018

Mixing of porpoise ecotypes in southwestern UK waters revealed by genetic profiling.

R Soc Open Sci 2017 Mar 1;4(3):160992. Epub 2017 Mar 1.

School of Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK; Institute of Zoology, Zoological Society of London, London NW1 4RY, UK.

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http://dx.doi.org/10.1098/rsos.160992DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5383846PMC
March 2017

Long-Distance Dispersal Shaped Patterns of Human Genetic Diversity in Eurasia.

Mol Biol Evol 2016 Apr 4;33(4):946-58. Epub 2015 Dec 4.

Computational and Molecular Population Genetics Lab, Institute of Ecology and Evolution, University of Bern, Bern, Switzerland Swiss Institute of Bioinformatics, Lausanne, Switzerland

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http://dx.doi.org/10.1093/molbev/msv332DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4776706PMC
April 2016

Influence of admixture and paleolithic range contractions on current European diversity gradients.

Mol Biol Evol 2013 Jan 25;30(1):57-61. Epub 2012 Aug 25.

Computational and Molecular Population Genetics Lab, Institute of Ecology and Evolution, University of Bern, Bern, Switzerland.

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https://academic.oup.com/mbe/article-lookup/doi/10.1093/molb
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http://dx.doi.org/10.1093/molbev/mss203DOI Listing
January 2013

Consequences of range contractions and range shifts on molecular diversity.

Mol Biol Evol 2012 Jan 21;29(1):207-18. Epub 2011 Jul 21.

Computational and Molecular Population Genetics Lab, Institute of Ecology and Evolution, University of Bern, Berne, Switzerland.

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http://dx.doi.org/10.1093/molbev/msr187DOI Listing
January 2012

SPLATCHE2: a spatially explicit simulation framework for complex demography, genetic admixture and recombination.

Bioinformatics 2010 Dec 17;26(23):2993-4. Epub 2010 Oct 17.

EnviroSPACE laboratory, Climate Change and Climate Impacts, Institute for Environmental Sciences, University of Geneva, Battelle - Building D, 7 route de Drize, 1227 Carouge, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btq579DOI Listing
December 2010

Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus.

Mol Ecol Resour 2010 Sep 2;10(5):886-901. Epub 2010 Jun 2.

INRA, UMR CBGP (INRA/IRD/Cirad/Montpellier SupAgro), Campus International de Baillarguet, CS 30016, F-34988 Montferrier-sur-Lez Cedex, France.

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http://dx.doi.org/10.1111/j.1755-0998.2010.02882.xDOI Listing
September 2010

A first step towards inferring levels of long-distance dispersal during past expansions.

Mol Ecol Resour 2010 Sep 30;10(5):902-14. Epub 2010 May 30.

Computational and Molecular Population Genetics Lab (CMPG), Institute of Ecology and Evolution, University of Berne, Baltzerstrasse 6, 3012 Berne, Switzerland EnviroSPACE Laboratory, Climate Change and Climate Impacts, Institute for Environmental Sciences, University of Geneva, Battelle - Building D, 7 route de Drize, 1227 Carouge, Switzerland Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland.

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http://dx.doi.org/10.1111/j.1755-0998.2010.02881.xDOI Listing
September 2010

Principal component analysis under population genetic models of range expansion and admixture.

Mol Biol Evol 2010 Jun 21;27(6):1257-68. Epub 2010 Jan 21.

Laboratoire Techniques de l'Ingénierie Médicale et de la Complexité, Faculty of Medicine, University Joseph Fourier, Grenoble Institute of Technology, Centre National de la Recherche Scientifique UMR5525, La Tronche, France.

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http://dx.doi.org/10.1093/molbev/msq010DOI Listing
June 2010

Inferring past demography using spatially explicit population genetic models.

Hum Biol 2009 Apr;81(2-3):141-57

Computational and Molecular Population Genetics Lab, Institute of Ecology and Evolution, University of Bern, 3012 Bern, Switzerland.

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http://dx.doi.org/10.3378/027.081.0303DOI Listing
April 2009

AccessMod 3.0: computing geographic coverage and accessibility to health care services using anisotropic movement of patients.

Int J Health Geogr 2008 Dec 16;7:63. Epub 2008 Dec 16.

Information, Evidence and Research, World Health Organization, 20 av, Appia, 1211 Geneva 27, Switzerland.

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http://dx.doi.org/10.1186/1476-072X-7-63DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2651127PMC
December 2008

Surfing during population expansions promotes genetic revolutions and structuration.

Trends Ecol Evol 2008 Jul 24;23(7):347-51. Epub 2008 May 24.

Computational and Molecular Population Genetics Lab, Institute of Zoology, University of Berne, Baltzerstrasse 6, Berne, Switzerland.

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http://dx.doi.org/10.1016/j.tree.2008.04.004DOI Listing
July 2008

Colonization history of the Swiss Rhine basin by the bullhead (Cottus gobio): inference under a Bayesian spatially explicit framework.

Mol Ecol 2008 Feb 8;17(3):757-72. Epub 2008 Jan 8.

CMPG, Zoological Institute, University of Bern, Baltzerstrasse 6, 3012 Bern, Switzerland.

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http://dx.doi.org/10.1111/j.1365-294X.2007.03621.xDOI Listing
February 2008

Statistical evaluation of alternative models of human evolution.

Proc Natl Acad Sci U S A 2007 Nov 31;104(45):17614-9. Epub 2007 Oct 31.

Laboratório de Biologia Genômica e Molecular, Faculdade de Biociências, Pontifícia Universidade Católica do Rio Grande do Sul, 90619-900 Porto Alegre, RS, Brazil.

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http://dx.doi.org/10.1073/pnas.0708280104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2077041PMC
November 2007

Representing higher-order singularities in vector fields on piecewise linear surfaces.

IEEE Trans Vis Comput Graph 2006 Sep-Oct;12(5):1315-22

INRIA-Alice, France.

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January 2007

Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations.

Genome Res 2005 Aug;15(8):1161-7

Computational and Molecular Population Genetics Lab, Zoological Institute, University of Bern, 3012 Bern, Switzerland.

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http://www.genome.org/cgi/doi/10.1101/gr.3708505
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http://dx.doi.org/10.1101/gr.3708505DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1182229PMC
August 2005

Bayesian estimation of recent migration rates after a spatial expansion.

Genetics 2005 May 16;170(1):409-17. Epub 2005 Feb 16.

Computational and Molecular Population Genetics Lab, Zoological Institute, University of Bern, Switzerland.

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http://dx.doi.org/10.1534/genetics.104.034199DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1449703PMC
May 2005

Intersurf: dynamic interface between proteins.

J Mol Graph Model 2005 Jan;23(4):347-54

Project Isa, Inria Lorraine, 615 rue du Jardin Botanique, BP 101, 54602 Villers-les-Nancy Cedex, France.

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http://dx.doi.org/10.1016/j.jmgm.2004.11.004DOI Listing
January 2005

Intra-deme molecular diversity in spatially expanding populations.

Mol Biol Evol 2003 Jan;20(1):76-86

Genetics and Biometry Lab, Department of Anthropology and Ecology, University of Geneva, Geneva, Switzerland.

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http://people.sc.fsu.edu/~pbeerli/bsc5932/ray-et-al-2003-sim
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http://dx.doi.org/10.1093/molbev/msg009DOI Listing
January 2003