Publications by authors named "Niall J Lennon"

35Publications

Technological considerations for genome-guided diagnosis and management of cancer.

Genome Med 2016 10 26;8(1):112. Epub 2016 Oct 26.

Broad Institute of MIT & Harvard, Cambridge, MA, 02142, USA.

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October 2016

Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus.

Cell 2015 Aug;162(4):738-50

FAS Center for Systems Biology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA; Broad Institute, Cambridge, MA 02142, USA; Department of Immunology and Infectious Disease, Harvard School of Public Health, Boston, MA 02115, USA. Electronic address:

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August 2015

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.

Nat Biotechnol 2014 Apr 23;32(4):381-386. Epub 2014 Mar 23.

Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA.

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April 2014

De novo assembly of highly diverse viral populations.

BMC Genomics 2012 Sep 13;13:475. Epub 2012 Sep 13.

The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

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September 2012

Reemergence and decline of dengue virus serotype 3 in Puerto Rico.

J Infect Dis 2012 Sep 27;206(6):893-901. Epub 2012 Jun 27.

Division of Vector-borne Infectious Diseases, Dengue Branch, Centers for Disease Control and Prevention, San Juan, Puerto Rico.

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September 2012

Genome-wide patterns of intrahuman dengue virus diversity reveal associations with viral phylogenetic clade and interhost diversity.

J Virol 2012 Aug 30;86(16):8546-58. Epub 2012 May 30.

Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, California, USA.

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August 2012

Dynamics of dengue disease severity determined by the interplay between viral genetics and serotype-specific immunity.

Sci Transl Med 2011 Dec;3(114):114ra128

Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA 94720-7354, USA.

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December 2011

Genetic diversity and lineage dynamic of dengue virus serotype 1 (DENV-1) in Cambodia.

Infect Genet Evol 2013 Apr 2;15:59-68. Epub 2011 Jul 2.

Institut Pasteur in Cambodia, Réseau International des Instituts Pasteur, 5 Monivong Boulevard, PO Box 983, Phnom Penh, Cambodia.

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April 2013

Molecular evolution of West Nile virus in a northern temperate region: Connecticut, USA 1999-2008.

Virology 2011 Aug 1;417(1):203-10. Epub 2011 Jul 1.

Center for Vector Biology and Zoonotic Diseases, The Connecticut Agricultural Experiment Station, New Haven, CT 06504, USA.

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August 2011

Endurance, refuge, and reemergence of dengue virus type 2, Puerto Rico, 1986-2007.

Emerg Infect Dis 2011 Jan;17(1):64-71

Dengue Branch, Division of Vector-Borne Diseases, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, San Juan, Puerto Rico.

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January 2011

PriSM: a primer selection and matching tool for amplification and sequencing of viral genomes.

Bioinformatics 2011 Jan 9;27(2):266-7. Epub 2010 Nov 9.

Broad Institute of MIT & Harvard, Cambridge, MA 02142, USA.

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January 2011

Increasing ecological inference from high throughput sequencing of fungi in the environment through a tagging approach.

Mol Ecol Resour 2008 Jul;8(4):742-52

Institute of Arctic Biology, 311 Irving I Building, University of Alaska, Fairbanks, AK 99775, USA, Broad Institute, Massachusetts Institute of Technology, 320 Charles Street, Cambridge, MA 02141, USA.

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July 2008

Dysferlin interacts with annexins A1 and A2 and mediates sarcolemmal wound-healing.

J Biol Chem 2003 Dec 23;278(50):50466-73. Epub 2003 Sep 23.

Day Neuromuscular Research Laboratory, Massachusetts General Hospital, Charlestown, Massachusetts 02129, USA.

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December 2003