Publications by authors named "Ni Huang"

50Publications

Integrated Single-Cell Atlases Reveal an Oral SARS-CoV-2 Infection and Transmission Axis.

Authors:
Ni Huang Paola Perez Takafumi Kato Yu Mikami Kenichi Okuda Rodney C Gilmore Cecilia Domínguez Conde Billel Gasmi Sydney Stein Margaret Beach Eileen Pelayo Jose Maldonado Bernard LaFont Ricardo Padilla Valerie Murrah Robert Maile Will Lovell Shannon Wallet Natalie M Bowman Suzanne L Meinig Matthew C Wolfgang Saibyasachi N Choudhury Mark Novotny Brian D Aevermann Richard Scheuermann Gabrielle Cannon Carlton Anderson Julie Marchesan Mandy Bush Marcelo Freire Adam Kimple Daniel L Herr Joseph Rabin Alison Grazioli Benjamin N French Thomas Pranzatelli John A Chiorini David E Kleiner Stefania Pittaluga Stephen Hewitt Peter D Burbelo Daniel Chertow Karen Frank Janice Lee Richard C Boucher Sarah A Teichmann Blake M Warner Kevin M Byrd

medRxiv 2020 Oct 27. Epub 2020 Oct 27.

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October 2020

A single-cell RNA-sequencing training and analysis suite using the Galaxy framework.

Authors:
Mehmet Tekman Bérénice Batut Alexander Ostrovsky Christophe Antoniewski Dave Clements Fidel Ramirez Graham J Etherington Hans-Rudolf Hotz Jelle Scholtalbers Jonathan R Manning Lea Bellenger Maria A Doyle Mohammad Heydarian Ni Huang Nicola Soranzo Pablo Moreno Stefan Mautner Irene Papatheodorou Anton Nekrutenko James Taylor Daniel Blankenberg Rolf Backofen Björn Grüning

Gigascience 2020 Oct;9(10)

Department of Bioinformatics, University of Freiburg, Georges-Köhler-Allee 106, 79110 Freiburg, Germany.

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October 2020

Evidence for 28 genetic disorders discovered by combining healthcare and research data.

Authors:
Joanna Kaplanis Kaitlin E Samocha Laurens Wiel Zhancheng Zhang Kevin J Arvai Ruth Y Eberhardt Giuseppe Gallone Stefan H Lelieveld Hilary C Martin Jeremy F McRae Patrick J Short Rebecca I Torene Elke de Boer Petr Danecek Eugene J Gardner Ni Huang Jenny Lord Iñigo Martincorena Rolph Pfundt Margot R F Reijnders Alison Yeung Helger G Yntema Lisenka E L M Vissers Jane Juusola Caroline F Wright Han G Brunner Helen V Firth David R FitzPatrick Jeffrey C Barrett Matthew E Hurles Christian Gilissen Kyle Retterer

Nature 2020 10 14;586(7831):757-762. Epub 2020 Oct 14.

GeneDx, Gaithersburg, MD, USA.

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October 2020

Spatial and temporal variations in global soil respiration and their relationships with climate and land cover.

Authors:
Ni Huang Li Wang Xiao-Peng Song T Andrew Black Rachhpal S Jassal Ranga B Myneni Chaoyang Wu Lei Wang Wanjuan Song Dabin Ji Shanshan Yu Zheng Niu

Sci Adv 2020 Oct 7;6(41). Epub 2020 Oct 7.

State Key Laboratory of Remote Sensing Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing Normal University, Beijing, China.

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October 2020

Comparison of visualization tools for single-cell RNAseq data.

Authors:
Batuhan Cakir Martin Prete Ni Huang Stijn van Dongen Pinar Pir Vladimir Yu Kiselev

NAR Genom Bioinform 2020 Sep 29;2(3):lqaa052. Epub 2020 Jul 29.

Wellcome Sanger Institute, Hinxton, CB10 1SA, UK.

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September 2020

Subtyping : A Common Pathogen in Bovine Animals.

Authors:
Xin Yang Ni Huang Wen Jiang Xinrui Wang Na Li Yaqiong Guo Martin Kváč Yaoyu Feng Lihua Xiao

Microorganisms 2020 Jul 24;8(8). Epub 2020 Jul 24.

Center for Emerging and Zoonotic Diseases, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510642, China.

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July 2020

SARS-CoV-2 Entry Genes Are Most Highly Expressed in Nasal Goblet and Ciliated Cells within Human Airways.

Authors:
Waradon Sungnak Ni Huang Christophe Bécavin Marijn Berg

ArXiv 2020 Mar 13. Epub 2020 Mar 13.

Department of Pathology and Medical Biology, University Medical Centre Groningen, University of Groningen, 9713 AV Groningen, Netherlands.

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March 2020

An integrated system for rapid assessment of ecological quality based on remote sensing data.

Authors:
Qian Ding Li Wang Meichen Fu Ni Huang

Environ Sci Pollut Res Int 2020 Sep 9;27(26):32779-32795. Epub 2020 Jun 9.

The State Key Laboratory of Remote Sensing Science, Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, No. 9 Dengzhuang South Road, Haidian District, Beijing, 100101, People's Republic of China.

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September 2020

Putative cell type discovery from single-cell gene expression data.

Authors:
Zhichao Miao Pablo Moreno Ni Huang Irene Papatheodorou Alvis Brazma Sarah A Teichmann

Nat Methods 2020 06 18;17(6):621-628. Epub 2020 May 18.

Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.

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June 2020

SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes.

Authors:
Waradon Sungnak Ni Huang Christophe Bécavin Marijn Berg Rachel Queen Monika Litvinukova Carlos Talavera-López Henrike Maatz Daniel Reichart Fotios Sampaziotis Kaylee B Worlock Masahiro Yoshida Josephine L Barnes

Nat Med 2020 05 23;26(5):681-687. Epub 2020 Apr 23.

UCL Respiratory, Division of Medicine, University College London, London, UK.

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May 2020

Expression Atlas update: from tissues to single cells.

Authors:
Irene Papatheodorou Pablo Moreno Jonathan Manning Alfonso Muñoz-Pomer Fuentes Nancy George Silvie Fexova Nuno A Fonseca Anja Füllgrabe Matthew Green Ni Huang Laura Huerta Haider Iqbal Monica Jianu Suhaib Mohammed Lingyun Zhao Andrew F Jarnuczak Simon Jupp John Marioni Kerstin Meyer Robert Petryszak Cesar Augusto Prada Medina Carlos Talavera-López Sarah Teichmann Juan Antonio Vizcaino Alvis Brazma

Nucleic Acids Res 2020 01;48(D1):D77-D83

European Molecular Biology Laboratory, European Bioinformatics Institute, EMBL-EBI, Hinxton, UK.

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January 2020

Rare mutations in the complement regulatory gene CSMD1 are associated with male and female infertility.

Authors:
Arthur S Lee Jannette Rusch Ana C Lima Abul Usmani Ni Huang Maarja Lepamets Katinka A Vigh-Conrad Ronald E Worthington Reedik Mägi Xiaobo Wu Kenneth I Aston John P Atkinson Douglas T Carrell Rex A Hess Moira K O'Bryan Donald F Conrad

Nat Commun 2019 10 11;10(1):4626. Epub 2019 Oct 11.

Department of Genetics, Washington University School of Medicine, St. Louis, MO, 63110, USA.

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October 2019

Physical and functional interaction between SET1/COMPASS complex component CFP-1 and a Sin3S HDAC complex in C. elegans.

Authors:
Flore Beurton Przemyslaw Stempor Matthieu Caron Alex Appert Yan Dong Ron A-J Chen David Cluet Yohann Couté Marion Herbette Ni Huang Hélène Polveche Martin Spichty Cécile Bedet Julie Ahringer Francesca Palladino

Nucleic Acids Res 2019 12;47(21):11164-11180

Laboratory of Biology and Modeling of the Cell, UMR5239 CNRS/Ecole Normale Supérieure de Lyon, INSERM U1210, UMS 3444 Biosciences Lyon Gerland, Université de Lyon, Lyon, France.

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December 2019

Vegetation change in response to climate factors and human activities on the Mongolian Plateau.

Authors:
Meng Meng Ni Huang Mingquan Wu Jie Pei Jian Wang Zheng Niu

PeerJ 2019 30;7:e7735. Epub 2019 Sep 30.

The State Key Laboratory of Remote Sensing Science, Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, Beijing, China.

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September 2019

Tumor Extracellular pH-Driven Cancer-Selective Artificial Receptor-Mediated Tumor-Targeted Fluorescence Imaging.

Authors:
Qian Guo Zhan Wu Yongbo Peng Wenyi Peng Qin Huang Miao Peng Ni Huang Xiaoxiao Hu Ting Fu Zilong Zhao Weihong Tan

Anal Chem 2019 11 11;91(21):13349-13354. Epub 2019 Oct 11.

Molecular Science and Biomedicine Laboratory (MBL), State Key Laboratory for Chemo/Bio-Sensing and Chemometrics, College of Chemistry and Chemical Engineering, College of Life Sciences, and Aptamer Engineering Center of Hunan Province , Hunan University , Changsha 410082 , China.

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November 2019

Chromatin accessibility dynamics across development and ageing.

Authors:
Jürgen Jänes Yan Dong Michael Schoof Jacques Serizay Alex Appert Chiara Cerrato Carson Woodbury Ron Chen Carolina Gemma Ni Huang Djem Kissiov Przemyslaw Stempor Annette Steward Eva Zeiser Sascha Sauer Julie Ahringer

Elife 2018 10 26;7. Epub 2018 Oct 26.

Department of Genetics, University of Cambridge, Cambridge, United Kingdom.

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October 2018

Spatial-temporal dynamics of carbon emissions and carbon sinks in economically developed areas of China: a case study of Guangdong Province.

Authors:
Jie Pei Zheng Niu Li Wang Xiao-Peng Song Ni Huang Jing Geng Yan-Bin Wu Hong-Hui Jiang

Sci Rep 2018 09 6;8(1):13383. Epub 2018 Sep 6.

Key Area Planning Construction and Management Bureau of Longgang, Shenzhen, Shenzhen, 518116, P.R. China.

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September 2018

No upward shift of alpine grassland distribution on the Qinghai-Tibetan Plateau despite rapid climate warming from 2000 to 2014.

Authors:
Ni Huang Jin-Sheng He Litong Chen Li Wang

Sci Total Environ 2018 Jun 12;625:1361-1368. Epub 2018 Jan 12.

The State Key Laboratory of Remote Sensing Science, Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, Beijing, China.

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June 2018

Dynamic landscape and regulation of RNA editing in mammals.

Authors:
Meng How Tan Qin Li Raghuvaran Shanmugam Robert Piskol Jennefer Kohler Amy N Young Kaiwen Ivy Liu Rui Zhang Gokul Ramaswami Kentaro Ariyoshi Ankita Gupte Liam P Keegan Cyril X George Avinash Ramu Ni Huang Elizabeth A Pollina Dena S Leeman Alessandra Rustighi Y P Sharon Goh Ajay Chawla Giannino Del Sal Gary Peltz Anne Brunet Donald F Conrad Charles E Samuel Mary A O'Connell Carl R Walkley Kazuko Nishikura Jin Billy Li

Nature 2017 10;550(7675):249-254

Department of Genetics, Stanford University School of Medicine, Stanford, California 94305, USA.

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October 2017

Correction: A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress.

Authors:
Alicia N McMurchy Przemyslaw Stempor Tessa Gaarenstroom Brian Wysolmerski Yan Dong Darya Aussianikava Alex Appert Ni Huang Paulina Kolasinska-Zwierz Alexandra Sapetschnig Eric A Miska Julie Ahringer

Elife 2017 10 5;6. Epub 2017 Oct 5.

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October 2017

Effects of calcination temperature and heating rate on the photocatalytic properties of ZnO prepared by pyrolysis.

Authors:
Lingling He Zhifang Tong Zhonghua Wang Ming Chen Ni Huang Wei Zhang

J Colloid Interface Sci 2018 Jan 8;509:448-456. Epub 2017 Sep 8.

College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou Industrial Park, Suzhou 215123, PR China. Electronic address:

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January 2018

Fungal Diversity in Field Mold-Damaged Soybean Fruits and Pathogenicity Identification Based on High-Throughput rDNA Sequencing.

Authors:
Jiang Liu Jun-Cai Deng Cai-Qiong Yang Ni Huang Xiao-Li Chang Jing Zhang Feng Yang Wei-Guo Liu Xiao-Chun Wang Tai-Wen Yong Jun-Bo Du Kai Shu Wen-Yu Yang

Front Microbiol 2017 3;8:779. Epub 2017 May 3.

Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of AgricultureChengdu, China.

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May 2017

Room-temperature synthesis of carnation-like ZnO@AgI hierarchical nanostructures assembled by AgI nanoparticles-decorated ZnO nanosheets with enhanced visible light photocatalytic activity.

Authors:
He Huang Ni Huang Zhonghua Wang Guangqiang Xia Ming Chen Lingling He Zhifang Tong Chunguang Ren

J Colloid Interface Sci 2017 Sep 26;502:77-88. Epub 2017 Apr 26.

Chinese Academy of Sciences, Shanghai Institute of Materia Medica, Yantai Branch, Yantai Institute of Materia Medica, Yantai, Shandong 264000, PR China.

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September 2017

A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress.

Authors:
Alicia N McMurchy Przemyslaw Stempor Tessa Gaarenstroom Brian Wysolmerski Yan Dong Darya Aussianikava Alex Appert Ni Huang Paulina Kolasinska-Zwierz Alexandra Sapetschnig Eric A Miska Julie Ahringer

Elife 2017 03 15;6. Epub 2017 Mar 15.

The Gurdon Institute and Department of Genetics, University of Cambridge, Cambridge, United Kingdom.

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March 2017

Spatial Variation of Soil Respiration in a Cropland under Winter Wheat and Summer Maize Rotation in the North China Plain.

Authors:
Ni Huang Li Wang Yongsen Hu Haifeng Tian Zheng Niu

PLoS One 2016 15;11(12):e0168249. Epub 2016 Dec 15.

The State Key Laboratory of Remote Sensing Science, Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, Beijing, China.

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July 2017

Stable chromatin domains separate broadly expressed and developmentally regulated genes.

Authors:
Kenneth J Evans Ni Huang Przemyslaw Stempor Michael A Chesney Thomas A Down Julie Ahringer

Proc Natl Acad Sci U S A 2016 Nov 25;113(45):E7020-E7029. Epub 2016 Oct 25.

Department of Genetics, The Gurdon Institute, University of Cambridge, Cambridge CB2 1QN, United Kingdom

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November 2016

Synthesis and Characterization of Eu3+-Doped CdS Quantum Dots by a Single-Step Aqueous Method.

Authors:
Chunyan Zhou Jiahui Song Xinguo Zhang Lu Sun Liya Zhou Ni Huang Yufei Gan Mengyang Chen Wei Zhang

J Nanosci Nanotechnol 2016 Apr;16(4):3848-51

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April 2016

[Effects of maize plant types on dry matter accumulation characteristics and yield of soybean in maize-soybean intercropping systems].

Authors:
Liang Cui Wen-yu Yang Ni Huang Jiang Liu Yan-ling Wang Xiao-hui Wang Yang Liu Shou Yan

Ying Yong Sheng Tai Xue Bao 2015 Aug;26(8):2414-20

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August 2015

A Screen for Genomic Disorders of Infertility Identifies MAST2 Duplications Associated with Nonobstructive Azoospermia in Humans.

Authors:
Ni Huang Yang Wen Xuejiang Guo Zheng Li Juncheng Dai Bixian Ni Jun Yu Yuan Lin Wen Zhou Bing Yao Yue Jiang Jiahao Sha Donald F Conrad Zhibin Hu

Biol Reprod 2015 Sep 22;93(3):61. Epub 2015 Jul 22.

State Key Lab of Reproductive Medicine, Nanjing Medical University, Nanjing, China Department of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, Nanjing, China

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September 2015

Deletions of chromosomal regulatory boundaries are associated with congenital disease.

Authors:
Jonas Ibn-Salem Sebastian Köhler Michael I Love Ho-Ryun Chung Ni Huang Matthew E Hurles Melissa Haendel Nicole L Washington Damian Smedley Christopher J Mungall Suzanna E Lewis Claus-Eric Ott Sebastian Bauer Paul N Schofield Stefan Mundlos Malte Spielmann Peter N Robinson

Genome Biol 2014 Sep 4;15(9):423. Epub 2014 Sep 4.

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September 2014

Modeling spatial patterns of soil respiration in maize fields from vegetation and soil property factors with the use of remote sensing and geographical information system.

Authors:
Ni Huang Li Wang Yiqiang Guo Pengyu Hao Zheng Niu

PLoS One 2014 26;9(8):e105150. Epub 2014 Aug 26.

The State Key Laboratory of Remote Sensing Science, Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, Beijing, China.

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May 2015

Genome-wide SNP and CNV analysis identifies common and low-frequency variants associated with severe early-onset obesity.

Authors:
Eleanor Wheeler Ni Huang Elena G Bochukova Julia M Keogh Sarah Lindsay Sumedha Garg Elana Henning Hannah Blackburn Ruth J F Loos Nick J Wareham Stephen O'Rahilly Matthew E Hurles Inês Barroso I Sadaf Farooqi

Nat Genet 2013 May 7;45(5):513-7. Epub 2013 Apr 7.

Wellcome Trust Sanger Institute, Cambridge, UK.

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May 2013

Human spermatogenic failure purges deleterious mutation load from the autosomes and both sex chromosomes, including the gene DMRT1.

Authors:
Alexandra M Lopes Kenneth I Aston Emma Thompson Filipa Carvalho João Gonçalves Ni Huang Rune Matthiesen Michiel J Noordam Inés Quintela Avinash Ramu Catarina Seabra Amy B Wilfert Juncheng Dai Jonathan M Downie Susana Fernandes Xuejiang Guo Jiahao Sha António Amorim Alberto Barros Angel Carracedo Zhibin Hu Matthew E Hurles Sergey Moskovtsev Carole Ober Darius A Paduch Joshua D Schiffman Peter N Schlegel Mário Sousa Douglas T Carrell Donald F Conrad

PLoS Genet 2013 Mar 21;9(3):e1003349. Epub 2013 Mar 21.

Institute of Molecular Pathology and Immunology of the University of Porto, Porto, Portugal.

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March 2013

Deleterious- and disease-allele prevalence in healthy individuals: insights from current predictions, mutation databases, and population-scale resequencing.

Authors:
Yali Xue Yuan Chen Qasim Ayub Ni Huang Edward V Ball Matthew Mort Andrew D Phillips Katy Shaw Peter D Stenson David N Cooper Chris Tyler-Smith

Am J Hum Genet 2012 Dec;91(6):1022-32

The Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.

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December 2012

Genome-wide transcriptome profiling reveals the functional impact of rare de novo and recurrent CNVs in autism spectrum disorders.

Authors:
Rui Luo Stephan J Sanders Yuan Tian Irina Voineagu Ni Huang Su H Chu Lambertus Klei Chaochao Cai Jing Ou Jennifer K Lowe Matthew E Hurles Bernie Devlin Matthew W State Daniel H Geschwind

Am J Hum Genet 2012 Jul 21;91(1):38-55. Epub 2012 Jun 21.

Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, 90095, USA.

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July 2012

A common X-linked inborn error of carnitine biosynthesis may be a risk factor for nondysmorphic autism.

Authors:
Patrícia B S Celestino-Soper Sara Violante Emily L Crawford Rui Luo Anath C Lionel Elsa Delaby Guiqing Cai Bekim Sadikovic Kwanghyuk Lee Charlene Lo Kun Gao Richard E Person Timothy J Moss Jennifer R German Ni Huang Marwan Shinawi Diane Treadwell-Deering Peter Szatmari Wendy Roberts Bridget Fernandez Richard J Schroer Roger E Stevenson Joseph D Buxbaum Catalina Betancur Stephen W Scherer Stephan J Sanders Daniel H Geschwind James S Sutcliffe Matthew E Hurles Ronald J A Wanders Chad A Shaw Suzanne M Leal Edwin H Cook Robin P Goin-Kochel Frédéric M Vaz Arthur L Beaudet

Proc Natl Acad Sci U S A 2012 May 7;109(21):7974-81. Epub 2012 May 7.

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.

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May 2012

Compound inheritance of a low-frequency regulatory SNP and a rare null mutation in exon-junction complex subunit RBM8A causes TAR syndrome.

Authors:
Cornelis A Albers Dirk S Paul Harald Schulze Kathleen Freson Jonathan C Stephens Peter A Smethurst Jennifer D Jolley Ana Cvejic Myrto Kostadima Paul Bertone Martijn H Breuning Najet Debili Panos Deloukas Rémi Favier Janine Fiedler Catherine M Hobbs Ni Huang Matthew E Hurles Graham Kiddle Ingrid Krapels Paquita Nurden Claudia A L Ruivenkamp Jennifer G Sambrook Kenneth Smith Derek L Stemple Gabriele Strauss Chantal Thys Chris van Geet Ruth Newbury-Ecob Willem H Ouwehand Cedric Ghevaert

Nat Genet 2012 Feb 26;44(4):435-9, S1-2. Epub 2012 Feb 26.

Department of Haematology, University of Cambridge, Cambridge, UK.

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February 2012

A systematic survey of loss-of-function variants in human protein-coding genes.

Authors:
Daniel G MacArthur Suganthi Balasubramanian Adam Frankish Ni Huang James Morris Klaudia Walter Luke Jostins Lukas Habegger Joseph K Pickrell Stephen B Montgomery Cornelis A Albers Zhengdong D Zhang Donald F Conrad Gerton Lunter Hancheng Zheng Qasim Ayub Mark A DePristo Eric Banks Min Hu Robert E Handsaker Jeffrey A Rosenfeld Menachem Fromer Mike Jin Xinmeng Jasmine Mu Ekta Khurana Kai Ye Mike Kay Gary Ian Saunders Marie-Marthe Suner Toby Hunt If H A Barnes Clara Amid Denise R Carvalho-Silva Alexandra H Bignell Catherine Snow Bryndis Yngvadottir Suzannah Bumpstead David N Cooper Yali Xue Irene Gallego Romero Jun Wang Yingrui Li Richard A Gibbs Steven A McCarroll Emmanouil T Dermitzakis Jonathan K Pritchard Jeffrey C Barrett Jennifer Harrow Matthew E Hurles Mark B Gerstein Chris Tyler-Smith

Science 2012 Feb;335(6070):823-8

Wellcome Trust Sanger Institute, Hinxton, UK.

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February 2012

Phenotype-specific effect of chromosome 1q21.1 rearrangements and GJA5 duplications in 2436 congenital heart disease patients and 6760 controls.

Authors:
Rachel Soemedi Ana Topf Ian J Wilson Rebecca Darlay Thahira Rahman Elise Glen Darroch Hall Ni Huang Jamie Bentham Shoumo Bhattacharya Catherine Cosgrove J David Brook Javier Granados-Riveron Kerry Setchfield Frances Bu'lock Chris Thornborough Koenraad Devriendt Jeroen Breckpot Michael Hofbeck Mark Lathrop Anita Rauch Gillian M Blue David S Winlaw Matthew Hurles Mauro Santibanez-Koref Heather J Cordell Judith A Goodship Bernard D Keavney

Hum Mol Genet 2012 Apr 22;21(7):1513-20. Epub 2011 Dec 22.

Institute of Genetic Medicine, Newcastle University, Newcastle, UK.

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April 2012

Exploration of signals of positive selection derived from genotype-based human genome scans using re-sequencing data.

Authors:
Min Hu Qasim Ayub José Afonso Guerra-Assunção Quan Long Zemin Ning Ni Huang Irene Gallego Romero Lira Mamanova Pelin Akan Xin Liu Alison J Coffey Daniel J Turner Harold Swerdlow John Burton Michael A Quail Donald F Conrad Anton J Enright Chris Tyler-Smith Yali Xue

Hum Genet 2012 May 5;131(5):665-74. Epub 2011 Nov 5.

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SA, UK.

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May 2012

High incidence of recurrent copy number variants in patients with isolated and syndromic Müllerian aplasia.

Authors:
Serena Nik-Zainal Reiner Strick Mekayla Storer Ni Huang Roland Rad Lionel Willatt Tomas Fitzgerald Vicki Martin Richard Sandford Nigel P Carter Andreas R Janecke Stefan P Renner Patricia G Oppelt Peter Oppelt Christine Schulze Sara Brucker Matthew Hurles Matthias W Beckmann Pamela L Strissel Charles Shaw-Smith

J Med Genet 2011 Mar 28;48(3):197-204. Epub 2011 Jan 28.

Department of Obstetrics and Gynecology, University-Clinic Erlangen, Erlangen, Germany.

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March 2011

Characterising and predicting haploinsufficiency in the human genome.

Authors:
Ni Huang Insuk Lee Edward M Marcotte Matthew E Hurles

PLoS Genet 2010 Oct 14;6(10):e1001154. Epub 2010 Oct 14.

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, UK.

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October 2010

Selecting sites for converting farmlands to wetlands in the Sanjiang Plain, Northeast China, based on remote sensing and GIS.

Authors:
Ni Huang Zongming Wang Dianwei Liu Zheng Niu

Environ Manage 2010 Nov 7;46(5):790-800. Epub 2010 Sep 7.

Institute of Remote Sensing Applications, Chinese Academy of Sciences, Beijing, China.

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November 2010

Independent and population-specific association of risk variants at the IRGM locus with Crohn's disease.

Authors:
Natalie J Prescott Katherine M Dominy Michiaki Kubo Cathryn M Lewis Sheila A Fisher Richard Redon Ni Huang Barbara E Stranger Katarzyna Blaszczyk Barry Hudspith Gareth Parkes Naoya Hosono Keiko Yamazaki Clive M Onnie Alastair Forbes Emmanouil T Dermitzakis Yusuke Nakamura John C Mansfield Jeremy Sanderson Matthew E Hurles Roland G Roberts Christopher G Mathew

Hum Mol Genet 2010 May 27;19(9):1828-39. Epub 2010 Jan 27.

Department of Medical and Molecular Genetics, King's College London School of Medicine, Guy's Hospital, London SE1 9RT, UK.

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May 2010

Large, rare chromosomal deletions associated with severe early-onset obesity.

Authors:
Elena G Bochukova Ni Huang Julia Keogh Elana Henning Carolin Purmann Kasia Blaszczyk Sadia Saeed Julian Hamilton-Shield Jill Clayton-Smith Stephen O'Rahilly Matthew E Hurles I Sadaf Farooqi

Nature 2010 Feb 6;463(7281):666-70. Epub 2009 Dec 6.

University of Cambridge Metabolic Research Laboratories, Institute of Metabolic Science, Addenbrooke's Hospital, Cambridge CB2 0QQ, UK.

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February 2010

Population differentiation as an indicator of recent positive selection in humans: an empirical evaluation.

Authors:
Yali Xue Xuelong Zhang Ni Huang Allan Daly Christopher J Gillson Daniel G Macarthur Bryndis Yngvadottir Alexandra C Nica Cara Woodwark Yuan Chen Donald F Conrad Qasim Ayub S Qasim Mehdi Pu Li Chris Tyler-Smith

Genetics 2009 Nov 7;183(3):1065-77. Epub 2009 Sep 7.

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton CB10 1SA, United Kingdom.

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November 2009

Adaptive evolution of UGT2B17 copy-number variation.

Authors:
Yali Xue Donglin Sun Allan Daly Fengtang Yang Xue Zhou Mengyao Zhao Ni Huang Tatiana Zerjal Charles Lee Nigel P Carter Matthew E Hurles Chris Tyler-Smith

Am J Hum Genet 2008 Sep 28;83(3):337-46. Epub 2008 Aug 28.

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton CB10 1SA, UK.

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September 2008

MeMo: a web tool for prediction of protein methylation modifications.

Authors:
Hu Chen Yu Xue Ni Huang Xuebiao Yao Zhirong Sun

Nucleic Acids Res 2006 Jul;34(Web Server issue):W249-53

Institute of Bioinformatics and Systems Biology, MOE Key Laboratory of Bioinformatics, State Key Laboratory of Biomembrane and Membrane Biotechnology, Department of Biological Sciences and Biotechnology, Tsinghua University, Beijing, China 100084.

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July 2006

SubLoc: a server/client suite for protein subcellular location based on SOAP.

Authors:
Hu Chen Ni Huang Zhirong Sun

Bioinformatics 2006 Feb 8;22(3):376-7. Epub 2005 Dec 8.

Institute of Bioinformatics and Systems Biology, MOE Key Laboratory of Bioinformatics, State Key Laboratory of Biomembrane and Membrane Biotechnology, Department of Biological Sciences and Biotechnology, Tsinghua University, Beijing 100084, China.

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February 2006

CTKPred: an SVM-based method for the prediction and classification of the cytokine superfamily.

Authors:
Ni Huang Hu Chen Zhirong Sun

Protein Eng Des Sel 2005 Aug 24;18(8):365-8. Epub 2005 Jun 24.

Institute of Bioinformatics and System Biology, MOE Key Laboratory of Bioinfomatics, State Key Laboratory of Biomembrane and Membrane Biotechnology, Department of Biological Science and Biotechnology, Tsinghua University, Beijing 100084, China.

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August 2005