Nathan S Watson-Haigh

Nathan S Watson-Haigh

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Nathan S Watson-Haigh

Nathan S Watson-Haigh

Publications by authors named "Nathan S Watson-Haigh"

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22Publications

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gRNA validation for wheat genome editing with the CRISPR-Cas9 system.

BMC Biotechnol 2019 10 30;19(1):71. Epub 2019 Oct 30.

School of Agriculture, Food & Wine, The University of Adelaide, Waite Campus, Urrbrae, SA, 5064, Australia.

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http://dx.doi.org/10.1186/s12896-019-0565-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6829922PMC
October 2019

Effects of Rht-B1 and Ppd-D1 loci on pollinator traits in wheat.

Theor Appl Genet 2019 Jul 21;132(7):1965-1979. Epub 2019 Mar 21.

School of Agriculture, Food and Wine, Plant Genomics Centre, University of Adelaide, Hartley Grove, Urrbrae, SA, 5064, Australia.

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http://dx.doi.org/10.1007/s00122-019-03329-wDOI Listing
July 2019

DAWN: a resource for yielding insights into the diversity among wheat genomes.

BMC Genomics 2018 Dec 17;19(1):941. Epub 2018 Dec 17.

School of Agriculture, Food and Wine, University of Adelaide, PMB 1, Glen Osmond, 5064, SA, Australia.

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https://bmcgenomics.biomedcentral.com/articles/10.1186/s1286
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http://dx.doi.org/10.1186/s12864-018-5228-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296097PMC
December 2018

POTAGE: A Visualisation Tool for Speeding up Gene Discovery in Wheat.

Sci Rep 2017 10 30;7(1):14315. Epub 2017 Oct 30.

University of Adelaide, School of Agriculture, Food and Wine, PMB 1, Glen Osmond, SA 5064, Australia.

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http://dx.doi.org/10.1038/s41598-017-14591-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5662734PMC
October 2017

Towards an open, collaborative, reusable framework for sharing hands-on bioinformatics training workshops.

Brief Bioinform 2017 03;18(2):348-355

The Genome Analysis Centre, Norwich, ELIXIR, Wellcome Trust Genome Campus, Hinxton, UK, The Swedish University for Agricultural Sciences, Uppsala, Sweden, European Molecular Biology Laboratory, Heidelberg, Germany, Ontario Institute for Cancer Research, Toronto, Canada, Instituto Gulbenkian de Ciência, Oeiras, Portugal, The University of New South Wales, Sydney, Australia, Netherlands Bioinformatics Centre, Department of Bioinformatics, Radboud Medical Center, Nijmegen, The Netherlands, CSC - IT Center for Science Ltd., Espoo, Finland, Whitehead Institute for Biomedical Research, MIT, Cambridge, MA, USA, CSIRO, Bioinformatics Core, Canberra, Australia, The Sainsbury Laboratory, Norwich Research Park, Norwich, UK, SIB Swiss Institute of Bioinformatics, 1 Rue Michel Servet, Genève, Switzerland, Academis, Illstrasse 12, Berlin, Germany, The Nowgen Centre, 29 Grafton Street, Manchester, UK, Department of Physics, Sapienza University, Rome, Italy, The Roslin Institute, Edinburgh, UK and The University of Manchester, Manchester, UK.

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http://dx.doi.org/10.1093/bib/bbw013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5444239PMC
March 2017

The evolutionary origin of CIPK16: A gene involved in enhanced salt tolerance.

Mol Phylogenet Evol 2016 07 1;100:135-147. Epub 2016 Apr 1.

Australian Centre for Plant Functional Genomics, PMB 1, Glen Osmond, SA 5064, Australia. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S10557903163003
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http://dx.doi.org/10.1016/j.ympev.2016.03.031DOI Listing
July 2016

The Na(+) transporter, TaHKT1;5-D, limits shoot Na(+) accumulation in bread wheat.

Plant J 2014 Nov 1;80(3):516-26. Epub 2014 Oct 1.

CSIRO Plant Industry, Canberra, ACT, 2601, Australia; School of Agriculture, Food and Wine and Waite Research Institute, University of Adelaide, Waite Research Precinct, Glen Osmond, SA, 5064, Australia; Australian Research Council Centre of Excellence in Plant Cell Walls, University of Adelaide, Waite Research Precinct, Glen Osmond, SA, 5064, Australia; Australian Centre for Plant Functional Genomics, University of Adelaide, Waite Research Precinct, Glen Osmond, SA, 5064, Australia; Australian Research Council Centre of Excellence in Plant Energy Biology, University of Adelaide, Waite Research Precinct, Glen Osmond, SA, 5064, Australia.

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http://dx.doi.org/10.1111/tpj.12651DOI Listing
November 2014

Genetic architecture of gene expression in the chicken.

BMC Genomics 2013 Jan 16;14:13. Epub 2013 Jan 16.

CSIRO Animal, Food and Helath Sciences, Australian Animal Health Laboratories, Geelong, VIC 3220, Australia.

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http://dx.doi.org/10.1186/1471-2164-14-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3575264PMC
January 2013

Building gene co-expression networks using transcriptomics data for systems biology investigations: Comparison of methods using microarray data.

Bioinformation 2012 21;8(18):855-61. Epub 2012 Sep 21.

Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, 1870 Frederiksberg C, Copenhagen, Denmark ; Authors contributed equally.

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http://dx.doi.org/10.6026/97320630008855DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3489090PMC
November 2012

SeqFIRE: a web application for automated extraction of indel regions and conserved blocks from protein multiple sequence alignments.

Nucleic Acids Res 2012 Jul 11;40(Web Server issue):W340-7. Epub 2012 Jun 11.

Department of Systematic Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala 75236, Sweden.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gks561DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394284PMC
July 2012

Genetic architecture of gene expression in ovine skeletal muscle.

BMC Genomics 2011 Dec 15;12:607. Epub 2011 Dec 15.

CSIRO Livestock Industries, ATSIP, PMB CSIRO Aitkenvale, Townsville, QLD 4814, Australia.

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http://dx.doi.org/10.1186/1471-2164-12-607DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3265547PMC
December 2011

Systems biology of ovine intestinal parasite resistance: disease gene modules and biomarkers.

Mol Biosyst 2011 Jan 11;7(1):235-46. Epub 2010 Nov 11.

Commonwealth Scientific and Industrial Research Organisation, Livestock Industries, Davies Laboratory, PMB PO Aitkenvale, Townsville, QLD 4814, Australia.

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http://dx.doi.org/10.1039/c0mb00190bDOI Listing
January 2011

FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases.

BMC Bioinformatics 2010 Jun 9;11:311. Epub 2010 Jun 9.

CSIRO Livestock Industries, Davies Laboratory, University Drive, Townsville, QLD 4810, Australia.

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http://dx.doi.org/10.1186/1471-2105-11-311DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2901372PMC
June 2010

PCIT: an R package for weighted gene co-expression networks based on partial correlation and information theory approaches.

Bioinformatics 2010 Feb 9;26(3):411-3. Epub 2009 Dec 9.

CSIRO Livestock Industries, Queensland Bioscience Precinct, St Lucia, QLD 4067, Australia.

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http://dx.doi.org/10.1093/bioinformatics/btp674DOI Listing
February 2010