Publications by authors named "Nancy Holroyd"

47Publications

Deciphering the role of miR-71 in Echinococcus multilocularis early development in vitro.

PLoS Negl Trop Dis 2019 12 27;13(12):e0007932. Epub 2019 Dec 27.

Laboratorio Biología Molecular de Hidatidosis, Instituto de Microbiología y Parasitología Médica, Universidad de Buenos Aires-Consejo Nacional de Investigaciones Científicas y Tecnológicas (IMPaM, UBA-CONICET), Buenos Aires, Argentina.

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http://dx.doi.org/10.1371/journal.pntd.0007932DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6957206PMC
December 2019

Complete Whole-Genome Sequence of Haemophilus haemolyticus NCTC 10839.

Microbiol Resour Announc 2019 Jun 20;8(25). Epub 2019 Jun 20.

Culture Collections, Public Health England, London, United Kingdom.

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http://dx.doi.org/10.1128/MRA.00232-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6588363PMC
June 2019

Transcriptomic profiling of nematode parasites surviving vaccine exposure.

Int J Parasitol 2018 04 10;48(5):395-402. Epub 2018 Mar 10.

Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Bearsden Road, Glasgow, United Kingdom.

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http://dx.doi.org/10.1016/j.ijpara.2018.01.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5909036PMC
April 2018

A method for single pair mating in an obligate parasitic nematode.

Int J Parasitol 2018 02 27;48(2):159-165. Epub 2017 Oct 27.

Department of Comparative Biology and Experimental Medicine, Faculty of Veterinary Medicine, University of Calgary, Calgary, Alberta T2N 4N1, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.ijpara.2017.08.010DOI Listing
February 2018

A gene expression atlas of adult Schistosoma mansoni and their gonads.

Sci Data 2017 08 22;4:170118. Epub 2017 Aug 22.

BFS, Institute of Parasitology, Justus Liebig University, 35392 Giessen, Germany.

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http://dx.doi.org/10.1038/sdata.2017.118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566097PMC
August 2017

HIV-1 Integrates Widely throughout the Genome of the Human Blood Fluke Schistosoma mansoni.

PLoS Pathog 2016 Oct 20;12(10):e1005931. Epub 2016 Oct 20.

Department of Microbiology, Immunology & Tropical Medicine, and Research Center for Neglected Diseases of Poverty, School of Medicine and Health Sciences, The George Washington University, Washington, DC, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1005931DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5072744PMC
October 2016

Complete Genome Sequence of Neisseria weaveri Strain NCTC13585.

Genome Announc 2016 Aug 25;4(4). Epub 2016 Aug 25.

Culture Collections, Public Health England, London, United Kingdom.

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http://dx.doi.org/10.1128/genomeA.00815-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000823PMC
August 2016

A novel member of the let-7 microRNA family is associated with developmental transitions in filarial nematode parasites.

BMC Genomics 2015 Apr 22;16:331. Epub 2015 Apr 22.

Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Garscube Estate, Bearsden Road, Glasgow, G61 1QH, UK.

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http://dx.doi.org/10.1186/s12864-015-1536-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4428239PMC
April 2015

Summarizing specific profiles in Illumina sequencing from whole-genome amplified DNA.

DNA Res 2014 Jun 18;21(3):243-54. Epub 2013 Dec 18.

Parasite Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SA, UK Faculty of Medicine, Division of Parasitology, Department of Infectious Disease, University of Miyazaki, Miyazaki 889-1692, Japan

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http://dx.doi.org/10.1093/dnares/dst054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4060946PMC
June 2014

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Authors:
Ewan Birney John A Stamatoyannopoulos Anindya Dutta Roderic Guigó Thomas R Gingeras Elliott H Margulies Zhiping Weng Michael Snyder Emmanouil T Dermitzakis Robert E Thurman Michael S Kuehn Christopher M Taylor Shane Neph Christoph M Koch Saurabh Asthana Ankit Malhotra Ivan Adzhubei Jason A Greenbaum Robert M Andrews Paul Flicek Patrick J Boyle Hua Cao Nigel P Carter Gayle K Clelland Sean Davis Nathan Day Pawandeep Dhami Shane C Dillon Michael O Dorschner Heike Fiegler Paul G Giresi Jeff Goldy Michael Hawrylycz Andrew Haydock Richard Humbert Keith D James Brett E Johnson Ericka M Johnson Tristan T Frum Elizabeth R Rosenzweig Neerja Karnani Kirsten Lee Gregory C Lefebvre Patrick A Navas Fidencio Neri Stephen C J Parker Peter J Sabo Richard Sandstrom Anthony Shafer David Vetrie Molly Weaver Sarah Wilcox Man Yu Francis S Collins Job Dekker Jason D Lieb Thomas D Tullius Gregory E Crawford Shamil Sunyaev William S Noble Ian Dunham France Denoeud Alexandre Reymond Philipp Kapranov Joel Rozowsky Deyou Zheng Robert Castelo Adam Frankish Jennifer Harrow Srinka Ghosh Albin Sandelin Ivo L Hofacker Robert Baertsch Damian Keefe Sujit Dike Jill Cheng Heather A Hirsch Edward A Sekinger Julien Lagarde Josep F Abril Atif Shahab Christoph Flamm Claudia Fried Jörg Hackermüller Jana Hertel Manja Lindemeyer Kristin Missal Andrea Tanzer Stefan Washietl Jan Korbel Olof Emanuelsson Jakob S Pedersen Nancy Holroyd Ruth Taylor David Swarbreck Nicholas Matthews Mark C Dickson Daryl J Thomas Matthew T Weirauch James Gilbert Jorg Drenkow Ian Bell XiaoDong Zhao K G Srinivasan Wing-Kin Sung Hong Sain Ooi Kuo Ping Chiu Sylvain Foissac Tyler Alioto Michael Brent Lior Pachter Michael L Tress Alfonso Valencia Siew Woh Choo Chiou Yu Choo Catherine Ucla Caroline Manzano Carine Wyss Evelyn Cheung Taane G Clark James B Brown Madhavan Ganesh Sandeep Patel Hari Tammana Jacqueline Chrast Charlotte N Henrichsen Chikatoshi Kai Jun Kawai Ugrappa Nagalakshmi Jiaqian Wu Zheng Lian Jin Lian Peter Newburger Xueqing Zhang Peter Bickel John S Mattick Piero Carninci Yoshihide Hayashizaki Sherman Weissman Tim Hubbard Richard M Myers Jane Rogers Peter F Stadler Todd M Lowe Chia-Lin Wei Yijun Ruan Kevin Struhl Mark Gerstein Stylianos E Antonarakis Yutao Fu Eric D Green Ulaş Karaöz Adam Siepel James Taylor Laura A Liefer Kris A Wetterstrand Peter J Good Elise A Feingold Mark S Guyer Gregory M Cooper George Asimenos Colin N Dewey Minmei Hou Sergey Nikolaev Juan I Montoya-Burgos Ari Löytynoja Simon Whelan Fabio Pardi Tim Massingham Haiyan Huang Nancy R Zhang Ian Holmes James C Mullikin Abel Ureta-Vidal Benedict Paten Michael Seringhaus Deanna Church Kate Rosenbloom W James Kent Eric A Stone Serafim Batzoglou Nick Goldman Ross C Hardison David Haussler Webb Miller Arend Sidow Nathan D Trinklein Zhengdong D Zhang Leah Barrera Rhona Stuart David C King Adam Ameur Stefan Enroth Mark C Bieda Jonghwan Kim Akshay A Bhinge Nan Jiang Jun Liu Fei Yao Vinsensius B Vega Charlie W H Lee Patrick Ng Atif Shahab Annie Yang Zarmik Moqtaderi Zhou Zhu Xiaoqin Xu Sharon Squazzo Matthew J Oberley David Inman Michael A Singer Todd A Richmond Kyle J Munn Alvaro Rada-Iglesias Ola Wallerman Jan Komorowski Joanna C Fowler Phillippe Couttet Alexander W Bruce Oliver M Dovey Peter D Ellis Cordelia F Langford David A Nix Ghia Euskirchen Stephen Hartman Alexander E Urban Peter Kraus Sara Van Calcar Nate Heintzman Tae Hoon Kim Kun Wang Chunxu Qu Gary Hon Rosa Luna Christopher K Glass M Geoff Rosenfeld Shelley Force Aldred Sara J Cooper Anason Halees Jane M Lin Hennady P Shulha Xiaoling Zhang Mousheng Xu Jaafar N S Haidar Yong Yu Yijun Ruan Vishwanath R Iyer Roland D Green Claes Wadelius Peggy J Farnham Bing Ren Rachel A Harte Angie S Hinrichs Heather Trumbower Hiram Clawson Jennifer Hillman-Jackson Ann S Zweig Kayla Smith Archana Thakkapallayil Galt Barber Robert M Kuhn Donna Karolchik Lluis Armengol Christine P Bird Paul I W de Bakker Andrew D Kern Nuria Lopez-Bigas Joel D Martin Barbara E Stranger Abigail Woodroffe Eugene Davydov Antigone Dimas Eduardo Eyras Ingileif B Hallgrímsdóttir Julian Huppert Michael C Zody Gonçalo R Abecasis Xavier Estivill Gerard G Bouffard Xiaobin Guan Nancy F Hansen Jacquelyn R Idol Valerie V B Maduro Baishali Maskeri Jennifer C McDowell Morgan Park Pamela J Thomas Alice C Young Robert W Blakesley Donna M Muzny Erica Sodergren David A Wheeler Kim C Worley Huaiyang Jiang George M Weinstock Richard A Gibbs Tina Graves Robert Fulton Elaine R Mardis Richard K Wilson Michele Clamp James Cuff Sante Gnerre David B Jaffe Jean L Chang Kerstin Lindblad-Toh Eric S Lander Maxim Koriabine Mikhail Nefedov Kazutoyo Osoegawa Yuko Yoshinaga Baoli Zhu Pieter J de Jong
June 2007

Phylogenetic relationships of the Wolbachia of nematodes and arthropods.

PLoS Pathog 2006 Oct;2(10):e94

Institutes of Evolutionary Biology and Immunology and Infection Research, University of Edinburgh, Edinburgh, United Kingdom.

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http://dx.doi.org/10.1371/journal.ppat.0020094DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1599763PMC
October 2006