Milan Sonka

Milan Sonka

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Milan Sonka

Publications by authors named "Milan Sonka"

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Endothelial dysfunction assessed by digital tonometry and discrepancy between fraction flow reserve and instantaneous wave free ratio.

Acta Cardiol 2020 Aug 4;75(4):323-328. Epub 2019 Apr 4.

2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Prague, Czech Republic.

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http://dx.doi.org/10.1080/00015385.2019.1586089DOI Listing
August 2020

Increased contrast enhancement of the parent vessel of unruptured intracranial aneurysms in 7T MR imaging.

J Neurointerv Surg 2020 May 18. Epub 2020 May 18.

Neurological Surgery, The University of Iowa Hospitals and Clinics, Iowa City, Iowa, USA.

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http://dx.doi.org/10.1136/neurintsurg-2020-015915DOI Listing
May 2020

Effects of implanting a long-term left ventricle assist device on post-transplant outcomes.

Int J Artif Organs 2020 Apr 24:391398820914626. Epub 2020 Apr 24.

Center of Cardiovascular and Transplant Surgery Brno, Brno, Czech Republic.

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http://dx.doi.org/10.1177/0391398820914626DOI Listing
April 2020

CorteXpert: A model-based method for automatic renal cortex segmentation.

Med Image Anal 2017 Dec 23;42:257-273. Epub 2017 Aug 23.

School of Electronics and Information Engineering, Soochow University, Jiangsu 215006, China. Electronic address:

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http://dx.doi.org/10.1016/j.media.2017.06.010DOI Listing
December 2017

Plaque volume and plaque risk profile in diabetic vs. non-diabetic patients undergoing lipid-lowering therapy: a study based on 3D intravascular ultrasound and virtual histology.

Cardiovasc Diabetol 2017 Dec 7;16(1):156. Epub 2017 Dec 7.

2nd Department of Medicine-Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, II. interni klinika VFN a 1. LF UK, U nemocnice 2, 128 08, Praha 2, Czech Republic.

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http://dx.doi.org/10.1186/s12933-017-0637-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5719721PMC
December 2017

Spatial Correspondence Between Intraretinal Fluid, Subretinal Fluid, and Pigment Epithelial Detachment in Neovascular Age-Related Macular Degeneration.

Invest Ophthalmol Vis Sci 2017 08;58(10):4039-4048

Christian Doppler Laboratory for Ophthalmic Image Analysis, Vienna Reading Center, Department of Ophthalmology and Optometry, Medical University of Vienna, Vienna, Austria.

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http://dx.doi.org/10.1167/iovs.16-20201DOI Listing
August 2017

A machine-learning graph-based approach for 3D segmentation of Bruch's membrane opening from glaucomatous SD-OCT volumes.

Med Image Anal 2017 Jul 6;39:206-217. Epub 2017 May 6.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA, 52242, United States; Iowa City VA Health Care System, Iowa City, IA, 52246, United States. Electronic address:

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http://dx.doi.org/10.1016/j.media.2017.04.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5729043PMC
July 2017

Non-invasive endothelial function assessment using digital reactive hyperaemia correlates with three-dimensional intravascular ultrasound and virtual histology-derived plaque volume and plaque phenotype.

Kardiol Pol 2016 10;74(12):1485-1491. Epub 2016 May 10.

2nd Department of Medicine, Department of Cardiovascular Medicine, 1st Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Czech Republic.

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http://dx.doi.org/10.5603/KP.a2016.0062DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5503116PMC
April 2017

Nerve Fiber Layer Thickness and Characteristics Associated with Glaucoma in Community Living Older Adults: Prelude to a Screening Trial?

Ophthalmic Epidemiol 2017 04 29;24(2):104-110. Epub 2016 Dec 29.

a Department of Ophthalmology and Visual Sciences , University of Wisconsin School of Medicine and Public Health , Madison , WI , USA.

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http://dx.doi.org/10.1080/09286586.2016.1258082DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5624712PMC
April 2017

Graph-based segmentation of abnormal nuclei in cervical cytology.

Comput Med Imaging Graph 2017 03 31;56:38-48. Epub 2017 Jan 31.

Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1016/j.compmedimag.2017.01.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5777156PMC
March 2017

Machine learning in a graph framework for subcortical segmentation.

Proc SPIE Int Soc Opt Eng 2017 Feb 24;10133. Epub 2017 Feb 24.

Dept. of Radiology, University of Pennsylvania, Philadelphia, PA, USA 19104.

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http://dx.doi.org/10.1117/12.2254874DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5471906PMC
February 2017

Pathologic Intimal Thickening Plaque Phenotype: Not as Innocent as Previously Thought. A Serial 3D Intravascular Ultrasound Virtual Histology Study.

Rev Esp Cardiol (Engl Ed) 2017 Jan 5;70(1):25-33. Epub 2016 Sep 5.

2nd Department of Internal Medicine, Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Praha, Czech Republic.

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http://dx.doi.org/10.1016/j.rec.2016.04.058DOI Listing
January 2017

Quantitative analysis of retinal OCT.

Med Image Anal 2016 10 12;33:165-169. Epub 2016 Jul 12.

Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA 52242, United States; Department of Ophthalmology & Visual Sciences, The University of Iowa, Iowa City, IA 52242, United States; Department of Electrical & Computer Engineering, The University of Iowa, Iowa City, IA 52242, United States.

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http://dx.doi.org/10.1016/j.media.2016.06.001DOI Listing
October 2016

Automated Segmentation of Knee MRI Using Hierarchical Classifiers and Just Enough Interaction Based Learning: Data from Osteoarthritis Initiative.

Med Image Comput Comput Assist Interv 2016 Oct 2;9901:344-351. Epub 2016 Oct 2.

Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA, USA.

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http://dx.doi.org/10.1007/978-3-319-46723-8_40DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5471813PMC
October 2016

Globally Optimal Label Fusion with Shape Priors.

Med Image Comput Comput Assist Interv 2016 Oct 2;9901:538-546. Epub 2016 Oct 2.

Iowa Institute for Biomedical Imaging, University of Iowa, Iowa City, USA.

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http://link.springer.com/10.1007/978-3-319-46723-8_62
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http://dx.doi.org/10.1007/978-3-319-46723-8_62DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5471814PMC
October 2016

Evaluation of Variable Thin-Cap Fibroatheroma Definitions and Association of Virtual Histology-Intravascular Ultrasound Findings With Cavity Rupture Size.

Am J Cardiol 2016 07 4;118(2):162-9. Epub 2016 May 4.

Division of Cardiology, Department of Medicine, Loyola University Chicago, Stritch School of Medicine, Loyola University Medical Center, Maywood, Illinois. Electronic address:

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http://dx.doi.org/10.1016/j.amjcard.2016.04.050DOI Listing
July 2016

4D Graph-Based Segmentation for Reproducible and Sensitive Choroid Quantification From Longitudinal OCT Scans.

Invest Ophthalmol Vis Sci 2016 07;57(9):OCT621-OCT630

Department of Ophthalmology and Visual Sciences, The University of Iowa, Iowa City, Iowa, United States 2Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa, United States.

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http://dx.doi.org/10.1167/iovs.15-18924DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5215413PMC
July 2016

Semiautomated segmentation of head and neck cancers in 18F-FDG PET scans: A just-enough-interaction approach.

Med Phys 2016 Jun;43(6):2948-2964

Department of Radiation Oncology, The University of Iowa, Iowa City, Iowa 52242 and The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, Iowa 52242.

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http://dx.doi.org/10.1118/1.4948679DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4874930PMC
June 2016

Retinal neurodegeneration may precede microvascular changes characteristic of diabetic retinopathy in diabetes mellitus.

Proc Natl Acad Sci U S A 2016 May 25;113(19):E2655-64. Epub 2016 Apr 25.

Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology, University of Iowa, Iowa City, IA 52242; Iowa Institute for Biomedical Imaging, University of Iowa, Iowa City, IA 52242; Department of Electrical and Computer Engineering, University of Iowa, Iowa City, IA 52242; Iowa City VA Health Care System, Iowa City, IA 52246; Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242

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http://dx.doi.org/10.1073/pnas.1522014113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4868487PMC
May 2016

Automated Segmentability Index for Layer Segmentation of Macular SD-OCT Images.

Transl Vis Sci Technol 2016 Mar 5;5(2):14. Epub 2016 Apr 5.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, IA, USA ; Iowa Institute for Biomedical Imaging, University of Iowa, Iowa City, IA, USA ; Department of Ophthalmology and Visual Sciences, University of Iowa Hospitals and Clinics, Iowa City, IA, USA ; Department of Biomedical Engineering, University of Iowa, Iowa City, IA, USA ; Stephen A. Wynn Institute for Vision Research, University of Iowa, Iowa City, IA, USA ; Department of Veterans Affairs, Iowa City VA Medical Center, Iowa City, IA, USA.

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http://dx.doi.org/10.1167/tvst.5.2.14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824284PMC
March 2016

Thickness mapping of eleven retinal layers segmented using the diffusion maps method in normal eyes.

J Ophthalmol 2015 19;2015:259123. Epub 2015 Apr 19.

The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA 52242, USA ; Department of Electrical & Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://www.hindawi.com/journals/joph/2015/259123/
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http://dx.doi.org/10.1155/2015/259123DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4417595PMC
May 2015

Validity of Automated Choroidal Segmentation in SS-OCT and SD-OCT.

Invest Ophthalmol Vis Sci 2015 May;56(5):3202-11

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa, United States 4Department of Ophthalmology and Visual Sciences, University of Iowa Hospitals and Clinics, Iowa City, Iowa, United States 6Stephen Wynn Institute for Vi.

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http://dx.doi.org/10.1167/iovs.14-15669DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4451615PMC
May 2015

Comparison of retinal and choriocapillaris thicknesses following sitting to supine transition in healthy individuals and patients with age-related macular degeneration.

JAMA Ophthalmol 2015 Mar;133(3):297-303

Vitreoretinal Service, Department of Ophthalmology and Visual Sciences, University of Iowa Hospitals and Clinics, Iowa City2The Stephen A. Wynn Institute for Vision Research, University of Iowa, Iowa City.

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http://dx.doi.org/10.1001/jamaophthalmol.2014.5168DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5777152PMC
March 2015

Quantitative analysis of retinal layers' optical intensities on 3D optical coherence tomography for central retinal artery occlusion.

Sci Rep 2015 Mar 18;5:9269. Epub 2015 Mar 18.

Iowa Institute for Biomedical Imaging and Department of Electrical and Computer Engineering, University of Iowa, Iowa, IA 52242, USA.

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http://dx.doi.org/10.1038/srep09269DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4363859PMC
March 2015

LOGISMOS-B for Primates: Primate Cortical Surface Reconstruction and Thickness Measurement.

Proc SPIE Int Soc Opt Eng 2015;9413

Iowa Institute for Biomedical Imaging, Dept. of Electrical & Computer Engineering, and Ophthalmology & Visual Sciences, The Univ. of Iowa, Iowa City, IA.

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http://dx.doi.org/10.1117/12.2082327DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4449148PMC
January 2015

Relationships of retinal structure and humphrey 24-2 visual field thresholds in patients with glaucoma.

Invest Ophthalmol Vis Sci 2014 Dec 9;56(1):259-71. Epub 2014 Dec 9.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa, United States.

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http://dx.doi.org/10.1167/iovs.14-15885DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4294288PMC
December 2014

Three-dimensional automated choroidal volume assessment on standard spectral-domain optical coherence tomography and correlation with the level of diabetic macular edema.

Am J Ophthalmol 2014 Nov 12;158(5):1039-48. Epub 2014 Aug 12.

Vienna Reading Center, Department of Ophthalmology, Medical University of Vienna, Vienna, Austria; Christian Doppler Laboratory for Ophthalmic Image Analysis, Medical University of Vienna, Vienna, Austria.

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http://dx.doi.org/10.1016/j.ajo.2014.08.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5750044PMC
November 2014

Robust cortical thickness measurement with LOGISMOS-B.

Med Image Comput Comput Assist Interv 2014 ;17(Pt 1):722-30

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4324754PMC
http://dx.doi.org/10.1007/978-3-319-10404-1_90DOI Listing
November 2014

Quantifying disrupted outer retinal-subretinal layer in SD-OCT images in choroidal neovascularization.

Invest Ophthalmol Vis Sci 2014 Apr 11;55(4):2329-35. Epub 2014 Apr 11.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa, United States.

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http://iovs.arvojournals.org/article.aspx?doi=10.1167/iovs.1
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http://dx.doi.org/10.1167/iovs.13-13048DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985574PMC
April 2014

RATS: Rapid Automatic Tissue Segmentation in rodent brain MRI.

J Neurosci Methods 2014 Jan 18;221:175-82. Epub 2013 Oct 18.

The University of Iowa, Department of Electrical and Computer Engineering, United States. Electronic address:

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http://dx.doi.org/10.1016/j.jneumeth.2013.09.021DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3914765PMC
January 2014

Intra-retinal layer segmentation of 3D optical coherence tomography using coarse grained diffusion map.

Med Image Anal 2013 Dec 11;17(8):907-28. Epub 2013 Jun 11.

Department of Physics and Biomedical Engineering, Medical Image and Signal Processing Research Center, Isfahan University of Medical Sciences, Isfahan, Iran. Electronic address:

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http://dx.doi.org/10.1016/j.media.2013.05.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3856938PMC
December 2013

Optical Coherence Tomography Noise Reduction Using Anisotropic Local Bivariate Gaussian Mixture Prior in 3D Complex Wavelet Domain.

Int J Biomed Imaging 2013 10;2013:417491. Epub 2013 Oct 10.

Biomedical Engineering Department, Medical Image & Signal Processing Research Center, Isfahan University of Medical Sciences, Isfahan 81745, Iran ; The Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1155/2013/417491DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3810483PMC
November 2013

Reproducibility of SD-OCT-based ganglion cell-layer thickness in glaucoma using two different segmentation algorithms.

Invest Ophthalmol Vis Sci 2013 Oct 25;54(10):6998-7004. Epub 2013 Oct 25.

Center for the Prevention and Treatment of Visual Loss, Iowa City VA Health Care System, Iowa City, Iowa.

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http://dx.doi.org/10.1167/iovs.13-12131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3809946PMC
October 2013

Graph-based IVUS segmentation with efficient computer-aided refinement.

IEEE Trans Med Imaging 2013 Aug 30;32(8):1536-49. Epub 2013 Apr 30.

Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA 52242, USA.

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http://ieeexplore.ieee.org/document/6510480/
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http://dx.doi.org/10.1109/TMI.2013.2260763DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3883441PMC
August 2013

Adjustment of the retinal angle in SD-OCT of glaucomatous eyes provides better intervisit reproducibility of peripapillary RNFL thickness.

Invest Ophthalmol Vis Sci 2013 Jul 18;54(7):4808-12. Epub 2013 Jul 18.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa 52242, USA.

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http://dx.doi.org/10.1167/iovs.13-12211DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3720146PMC
July 2013

Reproducibility of diabetic macular edema estimates from SD-OCT is affected by the choice of image analysis algorithm.

Invest Ophthalmol Vis Sci 2013 Jun 19;54(6):4184-8. Epub 2013 Jun 19.

Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City, IA, USA.

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http://dx.doi.org/10.1167/iovs.12-10420DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3687962PMC
June 2013

Curvature correction of retinal OCTs using graph-based geometry detection.

Phys Med Biol 2013 May 11;58(9):2925-38. Epub 2013 Apr 11.

Biomedical Engineering Department, Medical Image and Signal Processing Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.

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http://dx.doi.org/10.1088/0031-9155/58/9/2925DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3794717PMC
May 2013

Human photoreceptor outer segments shorten during light adaptation.

Invest Ophthalmol Vis Sci 2013 May 1;54(5):3721-8. Epub 2013 May 1.

Institute for Vision Research, University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1167/iovs.13-11812DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3668803PMC
May 2013

Optimal graph search based segmentation of airway tree double surfaces across bifurcations.

IEEE Trans Med Imaging 2013 Mar 10;32(3):493-510. Epub 2012 Oct 10.

Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA.

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http://ieeexplore.ieee.org/document/6328283/
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http://dx.doi.org/10.1109/TMI.2012.2223760DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4086865PMC
March 2013

Optimal multiple surface segmentation with shape and context priors.

IEEE Trans Med Imaging 2013 Feb 15;32(2):376-86. Epub 2012 Nov 15.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1109/TMI.2012.2227120DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4076846PMC
February 2013

Novel indices for left-ventricular dyssynchrony characterization based on highly automated segmentation from real-time 3-d echocardiography.

Ultrasound Med Biol 2013 Jan 8;39(1):72-88. Epub 2012 Nov 8.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1016/j.ultrasmedbio.2012.08.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3513930PMC
January 2013

The prediction of coronary artery disease based on non-invasive examinations and heme oxygenase 1 polymorphism versus virtual histology.

J Invasive Cardiol 2013 Jan;25(1):32-7

2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, II. interni klinika, U nemocnice 2, Prague, 12808 Czech Republic.

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January 2013

Lung segmentation refinement based on optimal surface finding utilizing a hybrid desktop/virtual reality user interface.

Comput Med Imaging Graph 2013 Jan 12;37(1):15-27. Epub 2013 Feb 12.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, United States.

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http://dx.doi.org/10.1016/j.compmedimag.2013.01.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3852918PMC
January 2013

Quantification of external limiting membrane disruption caused by diabetic macular edema from SD-OCT.

Invest Ophthalmol Vis Sci 2012 Dec 7;53(13):8042-8. Epub 2012 Dec 7.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa, USA.

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http://dx.doi.org/10.1167/iovs.12-10083DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3517271PMC
December 2012

Optimizing the information yield of 3-D OCT in glaucoma.

Invest Ophthalmol Vis Sci 2012 Dec 13;53(13):8162-71. Epub 2012 Dec 13.

Department of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1167/iovs.12-10551DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3522440PMC
December 2012

Automated segmentation of the choroid from clinical SD-OCT.

Invest Ophthalmol Vis Sci 2012 Nov 1;53(12):7510-9. Epub 2012 Nov 1.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa, USA.

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http://dx.doi.org/10.1167/iovs.12-10311DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3490539PMC
November 2012

Retinal imaging and image analysis.

IEEE Rev Biomed Eng 2010 ;3:169-208

Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1109/RBME.2010.2084567DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3131209PMC
August 2012

IVUS-based assessment of 3D morphology and virtual histology: prediction of atherosclerotic plaque status and changes.

Conf Proc IEEE Eng Med Biol Soc 2011 ;2011:6647-50

Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA, USA.

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http://dx.doi.org/10.1109/IEMBS.2011.6091639DOI Listing
August 2012

Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.

IEEE Trans Med Imaging 2012 Aug 19;31(8):1521-31. Epub 2012 Mar 19.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://ieeexplore.ieee.org/document/6171857/
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http://dx.doi.org/10.1109/TMI.2012.2191302DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3659794PMC
August 2012

Early neurodegeneration in the retina of type 2 diabetic patients.

Invest Ophthalmol Vis Sci 2012 May 14;53(6):2715-9. Epub 2012 May 14.

Department of Ophthalmology, Academic Medical Center, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1167/iovs.11-8997DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3366721PMC
May 2012

2-D pattern of nerve fiber bundles in glaucoma emerging from spectral-domain optical coherence tomography.

Invest Ophthalmol Vis Sci 2012 Jan 31;53(1):483-9. Epub 2012 Jan 31.

Center for the Prevention and Treatment of Visual Loss, Iowa City VA Health Care System, Iowa City, Iowa, USA.

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http://iovs.arvojournals.org/article.aspx?doi=10.1167/iovs.1
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http://dx.doi.org/10.1167/iovs.11-8349DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3292380PMC
January 2012

Surface-region context in optimal multi-object graph-based segmentation: robust delineation of pulmonary tumors.

Inf Process Med Imaging 2011 ;22:61-72

Department of Electrical & Computer Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158678PMC
http://dx.doi.org/10.1007/978-3-642-22092-0_6DOI Listing
August 2011

Efficient algorithms for segmenting globally optimal and smooth multi-surfaces.

Inf Process Med Imaging 2011 ;22:208-20

Department of Computer Science and Engineering State University of New York at Buffalo, Buffalo, NY 14260, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3679538PMC
http://dx.doi.org/10.1007/978-3-642-22092-0_18DOI Listing
August 2011

Globally optimal tumor segmentation in PET-CT images: a graph-based co-segmentation method.

Inf Process Med Imaging 2011 ;22:245-56

Department of Radiation Oncology, The University of Iowa, Iowa City, IA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158679PMC
http://dx.doi.org/10.1007/978-3-642-22092-0_21DOI Listing
August 2011

Segmentation of Pulmonary Vascular Trees from Thoracic 3D CT Images.

Int J Biomed Imaging 2009 14;2009:636240. Epub 2009 Dec 14.

Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA 52242, USA.

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http://www.hindawi.com/journals/ijbi/2009/636240/
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http://dx.doi.org/10.1155/2009/636240DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2801012PMC
July 2011

Vessel boundary delineation on fundus images using graph-based approach.

IEEE Trans Med Imaging 2011 Jun 6;30(6):1184-91. Epub 2011 Jan 6.

Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1109/TMI.2010.2103566DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137950PMC
June 2011

The late stent malapposition develops also after paclitaxel balloon predilatation before bare-metal stent implantation: case description.

Eur Heart J 2011 Jun 2;32(11):1432. Epub 2011 Feb 2.

2nd Department of Internal Medicine, General University Hospital, Charles University, U nemocnice 2, Prague 102 00, Czech Republic.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105248PMC
June 2011

Feature Guided Motion Artifact Reduction with Structure-Awareness in 4D CT Images.

Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit 2011 Jun;2011:1057-1064

Department of Radiation Oncology, The University of Iowa, Iowa City, IA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3207360PMC
June 2011

Quantitative assessment of the entire thoracic aorta from magnetic resonance images.

Cardiol Young 2011 Apr 22;21(2):170-7. Epub 2010 Dec 22.

Department of Pediatrics, University of Iowa Children's Hospital, Iowa City, 52242, United States of America.

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http://dx.doi.org/10.1017/S1047951110001678DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4355944PMC
April 2011

Image-based biomarkers in clinical practice.

Semin Radiat Oncol 2011 Apr;21(2):157-66

Department of Radiation Oncology, University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1016/j.semradonc.2010.11.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4270476PMC
April 2011

Characterization and identification of spatial artifacts during 4D-CT imaging.

Med Phys 2011 Apr;38(4):2074-87

Department of Radiation Oncology, Division of Medical Physics, University of Iowa Hospital and Clinics, Iowa City, Iowa 52242, USA.

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April 2011

Region detection by minimizing intraclass variance with geometric constraints, global optimality, and efficient approximation.

IEEE Trans Med Imaging 2011 Mar 29;30(3):814-27. Epub 2010 Nov 29.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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March 2011

Improved tensor scale computation with application to medical image interpolation.

Comput Med Imaging Graph 2011 Jan 18;35(1):64-80. Epub 2010 Oct 18.

Department of Electrical and Computer Engineering, University of Iowa, Iowa City, IA 52242, United States.

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January 2011

LOGISMOS--layered optimal graph image segmentation of multiple objects and surfaces: cartilage segmentation in the knee joint.

IEEE Trans Med Imaging 2010 Dec 19;29(12):2023-37. Epub 2010 Jul 19.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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December 2010

Graph search with appearance and shape information for 3-D prostate and bladder segmentation.

Med Image Comput Comput Assist Interv 2010 ;13(Pt 3):172-80

Department of Electrical & Computer Engineering, University of Iowa, Iowa City, IA 52242, USA.

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November 2010

Automated analysis of four-dimensional magnetic resonance images of the human aorta.

Int J Cardiovasc Imaging 2010 Jun 10;26(5):571-8. Epub 2010 Feb 10.

Department of Pediatrics, Carver College of Medicine, University of Iowa, Iowa City, IA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4344131PMC
June 2010

Three-dimensional analysis of retinal layer texture: identification of fluid-filled regions in SD-OCT of the macula.

IEEE Trans Med Imaging 2010 Jun 1;29(6):1321-30. Epub 2010 Apr 1.

Department of Ophthalmology and Visual Sciences and the Department of Biomedical Engineering, The University of Iowa, Iowa City, IA 52240, USA.

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June 2010

Measurement of aortic intimal-medial thickness in adolescents and young adults.

Ultrasound Med Biol 2010 Apr;36(4):560-5

Department of Neurology, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA, USA.

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April 2010

Topomorphologic separation of fused isointensity objects via multiscale opening: separating arteries and veins in 3-D pulmonary CT.

IEEE Trans Med Imaging 2010 Mar;29(3):840-51

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517589PMC
March 2010

4-D cardiac MR image analysis: left and right ventricular morphology and function.

IEEE Trans Med Imaging 2010 Feb 25;29(2):350-64. Epub 2009 Aug 25.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242 USA .

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2849009PMC
February 2010

Segmentation of the optic disc in 3-D OCT scans of the optic nerve head.

IEEE Trans Med Imaging 2010 Jan 15;29(1):159-68. Epub 2009 Sep 15.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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January 2010

Automated segmentation of the cup and rim from spectral domain OCT of the optic nerve head.

Invest Ophthalmol Vis Sci 2009 Dec 15;50(12):5778-84. Epub 2009 Jul 15.

Department of Ophthalmology and Visual Sciences, University of Iowa Hospitals and Clinics, Iowa City, Iowa 52242, USA.

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http://dx.doi.org/10.1167/iovs.09-3790DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2929655PMC
December 2009

Automated 3-D intraretinal layer segmentation of macular spectral-domain optical coherence tomography images.

IEEE Trans Med Imaging 2009 Sep 10;28(9):1436-47. Epub 2009 Mar 10.

Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2911837PMC
September 2009

Congenital aortic disease: 4D magnetic resonance segmentation and quantitative analysis.

Med Image Anal 2009 Jun 21;13(3):483-93. Epub 2009 Feb 21.

Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA 52242, USA.

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June 2009