Publications by authors named "Michael Seifert"

87Publications

Improving Internal Medicine Resident Comfort With Shoulder and Knee Joint Injections Using an Injection Workshop.

MedEdPORTAL 2020 09 28;16:10979. Epub 2020 Sep 28.

Professor, Department of Family Medicine, Maine Medical Center and Tufts University School of Medicine.

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September 2020

Promoting cardiovascular health post-transplant through early diagnosis and adequate management of hypertension and dyslipidemia.

Pediatr Transplant 2020 Sep 1:e13811. Epub 2020 Sep 1.

Department of Pediatrics, University of Alabama School of Medicine, Birmingham, AL, USA.

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September 2020

The clinical-phenotype continuum in DYNC1H1-related disorders-genomic profiling and proposal for a novel classification.

J Hum Genet 2020 Nov 12;65(11):1003-1017. Epub 2020 Aug 12.

Department of Pediatrics, Faculty of Medicine and University Hospital Cologne, Center for Molecular Medicine Cologne (CMMC), Center for Rare Diseases, University of Cologne, Cologne, Germany.

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November 2020

Survival differences and associated molecular signatures of DNMT3A-mutant acute myeloid leukemia patients.

Sci Rep 2020 07 29;10(1):12761. Epub 2020 Jul 29.

Institute for Medical Informatics and Biometry (IMB), Carl Gustav Carus Faculty of Medicine, Technische Universität Dresden, Dresden, Germany.

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July 2020

Molecular Characterization of Astrocytoma Progression Towards Secondary Glioblastomas Utilizing Patient-Matched Tumor Pairs.

Cancers (Basel) 2020 Jun 26;12(6). Epub 2020 Jun 26.

National Center for Tumor Diseases (NCT), Partner Site Dresden, D-01307 Dresden, Germany.

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June 2020

Network-based analysis of prostate cancer cell lines reveals novel marker gene candidates associated with radioresistance and patient relapse.

PLoS Comput Biol 2019 11 4;15(11):e1007460. Epub 2019 Nov 4.

OncoRay - National Center for Radiation Research in Oncology, Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Helmholtz-Zentrum Dresden-Rossendorf (HZDR), Dresden, Germany.

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November 2019

Discovery of highly divergent lineages of plant-associated astro-like viruses sheds light on the emergence of potyviruses.

Virus Res 2019 01 16;260:38-48. Epub 2018 Nov 16.

Division of Virus-associated Carcinogenesis, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany; Department of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany.

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January 2019

Network-based analysis of oligodendrogliomas predicts novel cancer gene candidates within the region of the 1p/19q co-deletion.

Acta Neuropathol Commun 2018 06 11;6(1):49. Epub 2018 Jun 11.

Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universität Dresden, Dresden, Germany.

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June 2018

Subclinical inflammation phenotypes and long-term outcomes after pediatric kidney transplantation.

Am J Transplant 2018 09 27;18(9):2189-2199. Epub 2018 Jun 27.

Department of Surgery, University of Alabama School of Medicine, Birmingham, Alabama.

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September 2018

Whole exome sequencing identifies mTOR and KEAP1 as potential targets for radiosensitization of HNSCC cells refractory to EGFR and β1 integrin inhibition.

Oncotarget 2018 Apr 6;9(26):18099-18114. Epub 2018 Apr 6.

OncoRay - National Center for Radiation Research in Oncology, Faculty of Medicine, Technische Universität Dresden, 01307 Dresden, Germany.

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April 2018

Comparative analysis of histologically classified oligodendrogliomas reveals characteristic molecular differences between subgroups.

BMC Cancer 2018 04 10;18(1):399. Epub 2018 Apr 10.

Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, Technische Universität Dresden, Dresden, Germany.

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April 2018

regNet: an R package for network-based propagation of gene expression alterations.

Bioinformatics 2018 Jan;34(2):308-311

Cellular Networks and Systems Biology, CECAD, University of Cologne, D-50931 Cologne, Germany.

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January 2018

CellTrans: An R Package to Quantify Stochastic Cell State Transitions.

Bioinform Biol Insights 2017 16;11:1177932217712241. Epub 2017 Jun 16.

Fakultät Informatik/Mathematik, Hochschule für Technik und Wirtschaft Dresden, Dresden, Germany.

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June 2017

Adhesion- and stress-related adaptation of glioma radiochemoresistance is circumvented by β1 integrin/JNK co-targeting.

Oncotarget 2017 Jul;8(30):49224-49237

OncoRay, National Center for Radiation Research in Oncology, Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Helmholtz-Zentrum Dresden, Rossendorf, PF 41, 01307, Dresden, Germany.

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July 2017

The effect of obesity on pathological complete response and survival in breast cancer patients receiving uncapped doses of neoadjuvant anthracycline-taxane-based chemotherapy.

Breast 2017 Jun 7;33:153-158. Epub 2017 Apr 7.

Department of Obstetrics and Gynecology, Division of Gynecology and Gynecologic Oncology, Breast Health Center, Medical University of Vienna, Vienna, Austria.

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June 2017

Polyomavirus Reactivation and Immune Responses to Kidney-Specific Self-Antigens in Transplantation.

J Am Soc Nephrol 2017 Apr 7;28(4):1314-1325. Epub 2016 Nov 7.

Renal Division, Department of Medicine, Washington University, St. Louis, Missouri; and.

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April 2017

Importance of rare gene copy number alterations for personalized tumor characterization and survival analysis.

Genome Biol 2016 10 3;17(1):204. Epub 2016 Oct 3.

Cellular Networks and Systems Biology, CECAD, University of Cologne, Joseph-Stelzmann-Str. 26, Cologne, 50931, Germany.

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October 2016

Inducing a humoral immune response to pancreatic cancer antigen.

Cell Immunol 2016 12 6;310:150-155. Epub 2016 Sep 6.

Department of General and Visceral Surgery, Universitätsklinik Freiburg, Freiburg, Germany.

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December 2016

Ligand trap for the activin type IIA receptor protects against vascular disease and renal fibrosis in mice with chronic kidney disease.

Kidney Int 2016 06 11;89(6):1231-43. Epub 2016 Mar 11.

Department of Pediatrics, Renal Division, Washington University, St. Louis, Missouri, USA; Department of Cell Biology, Washington University, St. Louis, Missouri, USA; Department of Medicine, Washington University, St. Louis, Missouri, USA. Electronic address:

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June 2016

Comparative transcriptomics reveals similarities and differences between astrocytoma grades.

BMC Cancer 2015 Dec 16;15:952. Epub 2015 Dec 16.

Institute for Clinical Genetics, Faculty of Medicine Carl Gustav Carus, Dresden University of Technology, Dresden, Germany.

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December 2015

Vitamin D in incident nephrotic syndrome: a Midwest Pediatric Nephrology Consortium study.

Pediatr Nephrol 2016 Mar 23;31(3):465-72. Epub 2015 Oct 23.

Division of Nephrology, Department of Pediatrics and Communicable Diseases, C.S. Mott Children's Hospital, University of Michigan, Ann Arbor, MI, USA.

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March 2016

The Kidney-Vascular-Bone Axis in the Chronic Kidney Disease-Mineral Bone Disorder.

Transplantation 2016 Mar;100(3):497-505

1 Division of Pediatric Nephrology, Department of Pediatrics, Southern Illinois University, Springfield, IL. 2 Division of Pediatric Nephrology, Department of Pediatrics, Washington University, St. Louis, MO.

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March 2016

Pathophysiology of the chronic kidney disease-mineral bone disorder.

Curr Opin Nephrol Hypertens 2015 Jul;24(4):303-9

aDepartment of Pediatrics, Nephrology bDepartments of Medicine and Cell Biology Washington University Saint Louis, Saint Louis, Missouri cDepartment of Pediatrics, Nephrology, Southern Illinois University, Springfield, Illinois, USA.

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July 2015

Kidney transplant results in children: progress made, but blacks lag behind.

Kidney Int 2015 Mar;87(3):492-4

1] Division of Pediatric Nephrology, Washington University School of Medicine and St Louis Children's Hospital, St Louis, Missouri, USA [2] Department of Pediatrics, Southern Illinois University School of Medicine, Springfield, Illinois, USA.

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March 2015

Modernization of Chronic Allograft Injury Research: Better Biomarkers, Better Studies, Better Outcomes.

Clin Transpl 2015 ;31:211-225

Department of Medicine, University of Alabama at Birmingham School of Medicine, Birmingham, AL.

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January 2015

Autoregressive higher-order hidden Markov models: exploiting local chromosomal dependencies in the analysis of tumor expression profiles.

PLoS One 2014 23;9(6):e100295. Epub 2014 Jun 23.

Center for Information Services and High Performance Computing, Dresden University of Technology, Dresden, Germany.

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November 2015

Cytomegalovirus and anemia: not just for transplant anymore.

J Am Soc Nephrol 2014 Aug 10;25(8):1613-5. Epub 2014 Apr 10.

Renal Division, Department of Medicine, Washington University at St. Louis, St. Louis, Missouri

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August 2014

Meiotic cohesin SMC1β provides prophase I centromeric cohesion and is required for multiple synapsis-associated functions.

PLoS Genet 2013 26;9(12):e1003985. Epub 2013 Dec 26.

Institute of Physiological Chemistry, Medical Faculty Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.

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August 2014

Copy number variation in transcriptionally active regions of sexual and apomictic Boechera demonstrates independently derived apomictic lineages.

Plant Cell 2013 Oct 29;25(10):3808-23. Epub 2013 Oct 29.

Apomixis Research Group, Leibniz Institute of Plant Genetics and Crop Plant Research, D-06466 Gatersleben, Germany.

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October 2013

Dispom: a discriminative de-novo motif discovery tool based on the jstacs library.

J Bioinform Comput Biol 2013 Feb 21;11(1):1340006. Epub 2013 Jan 21.

Institute of Computer Science, Martin Luther University Halle-Wittenberg, D-06099 Halle/Saale, Germany.

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February 2013

VEGF-C, VEGF-A and related angiogenesis factors as biomarkers of allograft vasculopathy in cardiac transplant recipients.

J Heart Lung Transplant 2013 Jan;32(1):120-8

Transplantation Research Center, Division of Nephrology, Department of Medicine, Boston Children's Hospital, Boston, Massachusetts 02115, USA.

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January 2013

MeDIP-HMM: genome-wide identification of distinct DNA methylation states from high-density tiling arrays.

Bioinformatics 2012 Nov 17;28(22):2930-9. Epub 2012 Sep 17.

Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research-IPK, Gatersleben, Germany.

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November 2012

Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon.

Nucleic Acids Res 2012 Sep 22;40(17):8240-54. Epub 2012 Jun 22.

Department of Molecular Genetics, Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK) Corrensstr. 3, D-06466 Gatersleben, Germany.

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September 2012

Second trimester anti-angiogenic proteins and preeclampsia.

Pregnancy Hypertens 2012 Apr;2(2):158-163

Department of Epidemiology, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA.

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April 2012

Therapy: Azithromycin and decolonization after HUS.

Nat Rev Nephrol 2012 May 1;8(6):317-8. Epub 2012 May 1.

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May 2012

Parsimonious higher-order hidden Markov models for improved array-CGH analysis with applications to Arabidopsis thaliana.

PLoS Comput Biol 2012 Jan 12;8(1):e1002286. Epub 2012 Jan 12.

Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.

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January 2012

Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids.

Plant J 2011 Aug 11;67(4):691-700. Epub 2011 Jul 11.

Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466 Gatersleben, Germany.

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August 2011

Exploiting prior knowledge and gene distances in the analysis of tumor expression profiles with extended Hidden Markov Models.

Bioinformatics 2011 Jun 21;27(12):1645-52. Epub 2011 Apr 21.

Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.

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June 2011

Monopole solution in a Lorentz-violating field theory.

Phys Rev Lett 2010 Nov 10;105(20):201601. Epub 2010 Nov 10.

Department of Physics, Indiana University, 727 E. Third Street, Bloomington, Indiana, 47405, USA.

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November 2010

Peptide affinity chromatography media that bind N(pro) fusion proteins under chaotropic conditions.

J Chromatogr A 2010 Oct 11;1217(40):6203-13. Epub 2010 Aug 11.

Department of Biotechnology, University of Natural Resources and Applied Life Sciences Vienna, Muthgasse 18, 1190 Vienna, Austria.

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October 2010

Characterization of streptavidin binding to biotinylated, binary self-assembled thiol monolayers--influence of component ratio and solvent.

Langmuir 2010 May;26(9):6386-93

Institute of Biochemistry, University of Muenster, Wilhelm-Klemm-Strasse 2, 48149 Muenster, Germany.

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May 2010

Acquired coarctation of the abdominal aorta related to umbilical artery catheterization.

Conn Med 2009 May;73(5):273-6

University of Connecticut School of Medicine, Farmington, USA.

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May 2009

Utilizing gene pair orientations for HMM-based analysis of promoter array ChIP-chip data.

Bioinformatics 2009 Aug 28;25(16):2118-25. Epub 2009 Apr 28.

Leibniz Institute of Plant Genetics and Crop Plant Research, Data Inspection Group, Corrensstrasse 3, 06466 Gatersleben, Germany.

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August 2009

Hypokalemia and nocturia in a 15-year-old girl.

Clin Pediatr (Phila) 2009 Apr 2;48(3):317-9. Epub 2008 Oct 2.

University of Connecticut School of Medicine, Farmington, CT, USA.

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April 2009

Expression of estrogen receptor beta isoforms in human breast cancer tissues and cell lines.

Breast Cancer Res Treat 2002 Feb;71(3):249-55

Division of Gynecology, General Hospital of Vienna, University of Vienna, Austria.

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February 2002

MMP-2 and MMP-9 expression in breast cancer-derived human fibroblasts is differentially regulated by stromal-epithelial interactions.

Breast Cancer Res Treat 2002 Mar;72(1):69-77

Division of Senology, Vienna University Medical Center, and Ludwig-Boltzmann-Institute for Clinical Experimental Oncology, Austria.

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March 2002