Michael Schatz

Michael Schatz

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Michael Schatz

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Samovar: Single-Sample Mosaic Single-Nucleotide Variant Calling with Linked Reads.

iScience 2019 Aug 29;18:1-10. Epub 2019 May 29.

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA; Department of Biology, Johns Hopkins University, Baltimore, MD, USA; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA. Electronic address:

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http://dx.doi.org/10.1016/j.isci.2019.05.037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6609817PMC
August 2019

Heteroclinic and homoclinic connections in a Kolmogorov-like flow.

Phys Rev E 2019 Jul;100(1-1):013112

School of Physics, Georgia Institute of Technology, Atlanta, Georgia 30332, USA.

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http://dx.doi.org/10.1103/PhysRevE.100.013112DOI Listing
July 2019

Controller therapy in Asians and whites with persistent Asthma.

Asian Pac J Allergy Immunol 2019 Jun;37(2):73-86

Departments of Allergy, Kaiser Permanente Southern California, San Diego, CA.

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http://dx.doi.org/10.12932/AP-210617-0105DOI Listing
June 2019

Hypo-osmotic-like stress underlies general cellular defects of aneuploidy.

Nature 2019 06 8;570(7759):117-121. Epub 2019 May 8.

Center for Cell Dynamics, Department of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.

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http://dx.doi.org/10.1038/s41586-019-1187-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6583789PMC
June 2019

Poorly Controlled Asthma During Pregnancy Remains Common in the United States.

J Allergy Clin Immunol Pract 2019 Jun 27. Epub 2019 Jun 27.

Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Mass. Electronic address:

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http://dx.doi.org/10.1016/j.jaip.2019.05.043DOI Listing
June 2019

Addressing confounding artifacts in reconstruction of gene co-expression networks.

Genome Biol 2019 05 16;20(1):94. Epub 2019 May 16.

Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.

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http://dx.doi.org/10.1186/s13059-019-1700-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6521369PMC
May 2019

The HEDIS Medication Management for People with Asthma measure is not associated with improved asthma outcomes.

J Allergy Clin Immunol Pract 2019 Apr 25;7(4):1327-1329.e8. Epub 2018 Oct 25.

Department of Allergy, Kaiser Permanente Medical Center, San Diego, Calif.

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http://dx.doi.org/10.1016/j.jaip.2018.10.015DOI Listing
April 2019

Impact of parental asthma, prenatal maternal asthma control, and vitamin D status on risk of asthma and recurrent wheeze in 3-year-old children.

Clin Exp Allergy 2019 Apr 3;49(4):419-429. Epub 2019 Jan 3.

Division of Pediatric Pulmonary Medicine, Department of Pediatrics, Golisano Children's Hospital at Strong, University of Rochester Medical Center, Rochester, New York.

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http://dx.doi.org/10.1111/cea.13320DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6438751PMC
April 2019

Genome-wide patterns of transposon proliferation in an evolutionary young hybrid fish.

Mol Ecol 2019 03 6;28(6):1491-1505. Epub 2019 Feb 6.

Institute for Biology and Environmental Sciences, Carl von Ossietzky University Oldenburg, Oldenburg, Germany.

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http://dx.doi.org/10.1111/mec.14969DOI Listing
March 2019

A multi-task convolutional deep neural network for variant calling in single molecule sequencing.

Nat Commun 2019 03 1;10(1):998. Epub 2019 Mar 1.

Department of Computer Science, Johns Hopkins University, Baltimore, 21218, MD, USA.

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http://dx.doi.org/10.1038/s41467-019-09025-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6397153PMC
March 2019

A master regulator of regeneration.

Science 2019 03;363(6432):1152-1153

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.

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http://dx.doi.org/10.1126/science.aaw6258DOI Listing
March 2019

Needs assessment survey for a food allergy control tool.

J Allergy Clin Immunol Pract 2019 Feb 11;7(2):701-703.e2. Epub 2018 Oct 11.

Stanford University, Stanford, Calif. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22132198183065
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http://dx.doi.org/10.1016/j.jaip.2018.09.035DOI Listing
February 2019

The Journal of Allergy and Clinical Immunology: In Practice 2018 Highlights.

J Allergy Clin Immunol Pract 2019 Feb 15;7(2):393-411. Epub 2018 Dec 15.

Department of Allergy, Kaiser Permanente Southern California, San Diego, Calif; Department of Research and Evaluation, Kaiser Permanente Southern California, Pasadena, Calif.

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http://dx.doi.org/10.1016/j.jaip.2018.12.007DOI Listing
February 2019

Graph genomes article collection.

Genome Biol 2019 02 1;20(1):25. Epub 2019 Feb 1.

Genome Biology, London, UK.

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http://dx.doi.org/10.1186/s13059-019-1636-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6357451PMC
February 2019

Controversies in Drug Allergy: Consensus Documents From the World Experts.

J Allergy Clin Immunol Pract 2019 Jan 18;7(1):66-67. Epub 2018 Dec 18.

University of Iowa and the Iowa City VA, Iowa City, Iowa.

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http://dx.doi.org/10.1016/j.jaip.2018.10.012DOI Listing
January 2019

Controversies in drug allergy: Consensus documents from the world experts.

J Allergy Clin Immunol 2019 Jan;143(1):82-83

University of Iowa and the Iowa City VA, Iowa City, Iowa.

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http://dx.doi.org/10.1016/j.jaci.2018.10.014DOI Listing
January 2019

Antibiotics for respiratory infections during pregnancy: prevalence and risk factors.

J Allergy Clin Immunol Pract 2016 Nov - Dec;4(6):1256-1257.e2. Epub 2016 Jul 21.

Department of Allergy, Kaiser Permanente Medical Center, San Diego, Calif.

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http://dx.doi.org/10.1016/j.jaip.2016.06.015DOI Listing
December 2018

Publisher Correction: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

Nat Genet 2018 12;50(12):1754

Fujian Agriculture and Forestry University and University of Illinois at Urbana-Champaign School of Integrative Biology Joint Center for Genomics and Biotechnology, National Sugarcane Engineering Technology Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Corps, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.

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http://www.nature.com/articles/s41588-018-0293-7
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http://dx.doi.org/10.1038/s41588-018-0293-7DOI Listing
December 2018

Novel circular RNA NF1 acts as a molecular sponge, promoting gastric cancer by absorbing miR-16.

Endocr Relat Cancer 2018 12 1. Epub 2018 Dec 1.

S Meltzer, Division of Gastroenterology, Department of Medicine, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, United States.

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https://erc.bioscientifica.com/view/journals/erc/26/3/ERC-18
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http://dx.doi.org/10.1530/ERC-18-0478DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6545167PMC
December 2018

Controversies in drug allergy: consensus documents from the world experts.

World Allergy Organ J 2018 19;11(1):41. Epub 2018 Dec 19.

4Univiersity of Iowa and the Iowa City VA, Iowa City, IA USA.

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http://dx.doi.org/10.1186/s40413-018-0223-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6299546PMC
December 2018

The Journal of Allergy Clinical Immunology: In Practice. Making An Impact.

J Allergy Clin Immunol Pract 2016 Sep-Oct;4(5):797-8

Department of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY.

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http://dx.doi.org/10.1016/j.jaip.2016.06.026DOI Listing
November 2018

Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

Nat Genet 2018 11 8;50(11):1565-1573. Epub 2018 Oct 8.

Fujian Agriculture and Forestry University and University of Illinois at Urbana-Champaign School of Integrative Biology Joint Center for Genomics and Biotechnology, National Sugarcane Engineering Technology Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Key Laboratory of Genetics, Breeding and Multiple Utilization of Corps, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, China.

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http://www.nature.com/articles/s41588-018-0237-2
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http://dx.doi.org/10.1038/s41588-018-0237-2DOI Listing
November 2018

Unstable equilibria and invariant manifolds in quasi-two-dimensional Kolmogorov-like flow.

Phys Rev E 2018 Aug;98(2-1):023105

School of Physics, Georgia Institute of Technology, Atlanta, Georgia 30332, USA.

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http://dx.doi.org/10.1103/PhysRevE.98.023105DOI Listing
August 2018

KBase: The United States Department of Energy Systems Biology Knowledgebase.

Nat Biotechnol 2018 07;36(7):566-569

Computer Science and Math, Computer Science Initiative, Brookhaven National Laboratory, Upton, New York, USA.

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http://dx.doi.org/10.1038/nbt.4163DOI Listing
July 2018

Piercing the dark matter: bioinformatics of long-range sequencing and mapping.

Nat Rev Genet 2018 06;19(6):329-346

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.

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http://dx.doi.org/10.1038/s41576-018-0003-4DOI Listing
June 2018

Accurate detection of complex structural variations using single-molecule sequencing.

Nat Methods 2018 06 30;15(6):461-468. Epub 2018 Apr 30.

Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

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http://dx.doi.org/10.1038/s41592-018-0001-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5990442PMC
June 2018

Precise detection of de novo single nucleotide variants in human genomes.

Proc Natl Acad Sci U S A 2018 05 7;115(21):5516-5521. Epub 2018 May 7.

Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, 62210 Morelos, México;

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http://dx.doi.org/10.1073/pnas.1802244115DOI Listing
May 2018

Patterns of prednisone use during pregnancy in women with rheumatoid arthritis: Daily and cumulative dose.

Pharmacoepidemiol Drug Saf 2018 04 28;27(4):430-438. Epub 2018 Feb 28.

Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA.

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http://doi.wiley.com/10.1002/pds.4410
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http://dx.doi.org/10.1002/pds.4410DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6039094PMC
April 2018

Scikit-ribo Enables Accurate Estimation and Robust Modeling of Translation Dynamics at Codon Resolution.

Cell Syst 2018 Feb 17;6(2):180-191.e4. Epub 2018 Jan 17.

Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD 21211, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2017.12.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832574PMC
February 2018

The Journal of Allergy and Clinical Immunology: In Practice 2017 Year in Review.

J Allergy Clin Immunol Pract 2018 Mar - Apr;6(2):328-352. Epub 2018 Feb 1.

Department of Allergy, Kaiser Permanente Southern California, San Diego, Calif.

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http://dx.doi.org/10.1016/j.jaip.2017.12.016DOI Listing
February 2018

Management of Asthma during Pregnancy: Optimizing Outcomes and Minimizing Risk.

Semin Respir Crit Care Med 2018 Feb 10;39(1):29-35. Epub 2018 Feb 10.

Department of Allergy, Kaiser Permanente Medical Center, San Diego, California.

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http://dx.doi.org/10.1055/s-0037-1606216DOI Listing
February 2018

Claims-based risk model for first severe COPD exacerbation.

Am J Manag Care 2018 02 1;24(2):e45-e53. Epub 2018 Feb 1.

GlaxoSmithKline, 5 Moore Dr, Research Triangle Park, NC 27709. Email:

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February 2018

Burden of Chronic Oral Corticosteroid Use by Adults with Persistent Asthma.

J Allergy Clin Immunol Pract 2017 Jul - Aug;5(4):1050-1060.e9. Epub 2017 Feb 10.

Observational Research Center, AstraZeneca, Gaithersburg, Md.

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http://dx.doi.org/10.1016/j.jaip.2016.12.023DOI Listing
January 2018

Oral corticosteroid exposure and adverse effects in asthmatic patients.

J Allergy Clin Immunol 2018 01 27;141(1):110-116.e7. Epub 2017 Apr 27.

Department of Allergy, Kaiser Permanente Medical Center, San Diego, Calif.

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https://linkinghub.elsevier.com/retrieve/pii/S00916749173068
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http://dx.doi.org/10.1016/j.jaci.2017.04.009DOI Listing
January 2018

Comparative effectiveness trials in asthma - how will I recognize one?

Curr Opin Pulm Med 2018 01;24(1):78-82

Division of Pulmonary, Critical Care, Sleep, and Allergy, University of Illinois at Chicago, Chicago, Illinois.

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http://dx.doi.org/10.1097/MCP.0000000000000442DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5985979PMC
January 2018

Blood Eosinophil Count and Outcomes in Severe Uncontrolled Asthma: A Prospective Study.

J Allergy Clin Immunol Pract 2017 Jan - Feb;5(1):144-153.e8. Epub 2016 Sep 21.

Kaiser Permanente Southern California Region, San Diego and Pasadena, Calif.

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http://dx.doi.org/10.1016/j.jaip.2016.07.015DOI Listing
November 2017

The Journal of Allergy and Clinical Immunology: In Practice - 2016 Year in Review.

J Allergy Clin Immunol Pract 2017 Mar - Apr;5(2):218-236. Epub 2017 Jan 28.

Department of Allergy, Kaiser Permanente Southern California, San Diego, Calif.

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http://dx.doi.org/10.1016/j.jaip.2016.12.002DOI Listing
November 2017

Vitamin D supplementation in pregnancy, prenatal 25(OH)D levels, race, and subsequent asthma or recurrent wheeze in offspring: Secondary analyses from the Vitamin D Antenatal Asthma Reduction Trial.

J Allergy Clin Immunol 2017 Nov 9;140(5):1423-1429.e5. Epub 2017 Mar 9.

Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, Mass; Harvard Medical School, Boston, Mass. Electronic address:

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http://dx.doi.org/10.1016/j.jaci.2017.01.013DOI Listing
November 2017

Asthma control status in pregnancy, body mass index, and maternal vitamin D levels.

J Allergy Clin Immunol 2017 11 9;140(5):1453-1456.e7. Epub 2017 Jun 9.

Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Mass; Division of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Mass. Electronic address:

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http://dx.doi.org/10.1016/j.jaci.2017.03.053DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5708874PMC
November 2017

Relationship of Blood Eosinophil Count to Exacerbations in Chronic Obstructive Pulmonary Disease.

J Allergy Clin Immunol Pract 2018 May - Jun;6(3):944-954.e5. Epub 2017 Nov 15.

Kaiser Permanente Southern California, San Diego, Calif; Kaiser Permanente Southern California, Pasadena, Calif.

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http://dx.doi.org/10.1016/j.jaip.2017.10.004DOI Listing
November 2017

LRSim: A Linked-Reads Simulator Generating Insights for Better Genome Partitioning.

Comput Struct Biotechnol J 2017 9;15:478-484. Epub 2017 Nov 9.

Department of Computer Science, Johns Hopkins University, United States.

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http://dx.doi.org/10.1016/j.csbj.2017.10.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5711661PMC
November 2017

The Association of Maternal Asthma and Early Pregnancy Vitamin D with Risk of Preeclampsia: An Observation From Vitamin D Antenatal Asthma Reduction Trial (VDAART).

J Allergy Clin Immunol Pract 2018 Mar - Apr;6(2):600-608.e2. Epub 2017 Sep 8.

Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, Mass; Harvard Medical School, Boston, Mass; Partners Center for Personalized Medicine, Partners Health Care, Boston, Mass. Electronic address:

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http://dx.doi.org/10.1016/j.jaip.2017.07.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5843492PMC
September 2017

Erratum to: The advantages of SMRT sequencing.

Genome Biol 2017 08 16;18(1):156. Epub 2017 Aug 16.

Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11743, USA.

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http://dx.doi.org/10.1186/s13059-017-1295-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5559860PMC
August 2017

GenomeScope: fast reference-free genome profiling from short reads.

Bioinformatics 2017 Jul;33(14):2202-2204

Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

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http://dx.doi.org/10.1093/bioinformatics/btx153DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870704PMC
July 2017

16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model.

Gigascience 2017 07;6(7):1-4

Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218, USA.

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http://dx.doi.org/10.1093/gigascience/gix045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570013PMC
July 2017

Drivers of health care costs for adults with persistent asthma.

J Allergy Clin Immunol Pract 2018 Jan - Feb;6(1):265-268.e4. Epub 2017 Jul 12.

Departments of Allergy and Research and Evaluation, Kaiser Permanente Southern California, San Diego and Pasadena, Calif.

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http://dx.doi.org/10.1016/j.jaip.2017.05.026DOI Listing
July 2017

The Utility of the Reflux Symptom Index for Diagnosis of Laryngopharyngeal Reflux in an Allergy Patient Population.

J Allergy Clin Immunol Pract 2018 Jan - Feb;6(1):132-138.e1. Epub 2017 Jun 9.

Division of Allergy and Immunology, Scripps Green Hospital, La Jolla, Calif.

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http://dx.doi.org/10.1016/j.jaip.2017.04.039DOI Listing
June 2017

Pharmacological difficulties in the treatment of asthma in pregnant women.

Expert Rev Clin Pharmacol 2017 Mar 26;10(3):285-292. Epub 2016 Dec 26.

b Department of Allergy , Kaiser Permanente Medical Center , San Diego , CA , USA.

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http://dx.doi.org/10.1080/17512433.2017.1268914DOI Listing
March 2017

Nanopore sequencing meets epigenetics.

Authors:
Michael C Schatz

Nat Methods 2017 03;14(4):347-348

Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, Maryland, USA, and at the Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA.

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http://dx.doi.org/10.1038/nmeth.4240DOI Listing
March 2017

Forecasting Fluid Flows Using the Geometry of Turbulence.

Phys Rev Lett 2017 Mar 15;118(11):114501. Epub 2017 Mar 15.

School of Physics, Georgia Institute of Technology, Atlanta, Georgia 30332-0430, USA.

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http://dx.doi.org/10.1103/PhysRevLett.118.114501DOI Listing
March 2017

Characteristics and Outcomes of HEDIS-Defined Asthma Patients with COPD Diagnostic Coding.

J Allergy Clin Immunol Pract 2016 Mar-Apr;4(2):273-83.e5. Epub 2015 Nov 24.

Observational Research Center, AstraZeneca, Gaithersburg, Md.

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http://dx.doi.org/10.1016/j.jaip.2015.10.002DOI Listing
December 2016

Validation of the Pregnancy Asthma Control Test.

J Allergy Clin Immunol Pract 2016 Mar-Apr;4(2):310-5.e1. Epub 2016 Jan 5.

Department of Pediatrics, University of California, San Diego, La Jolla, Calif; Department of Family Medicine and Public Health, University of California, San Diego, La Jolla, Calif.

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http://dx.doi.org/10.1016/j.jaip.2015.11.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4789157PMC
December 2016

The evolution of inflorescence diversity in the nightshades and heterochrony during meristem maturation.

Genome Res 2016 12 7;26(12):1676-1686. Epub 2016 Nov 7.

Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1101/gr.207837.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131819PMC
December 2016

Utilization and Costs of Severe Uncontrolled Asthma in a Managed-Care Setting.

J Allergy Clin Immunol Pract 2016 Jan-Feb;4(1):120-9.e3. Epub 2015 Oct 4.

Kaiser Permanente Southern California Region, San Diego and Pasadena, Calif.

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https://linkinghub.elsevier.com/retrieve/pii/S22132198150043
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http://dx.doi.org/10.1016/j.jaip.2015.08.003DOI Listing
October 2016

Psychometric Properties of the Asthma Symptom Diary (ASD), a Diary for Use in Clinical Trials of Persistent Asthma.

J Allergy Clin Immunol Pract 2016 Jan-Feb;4(1):60-6.e4. Epub 2015 Nov 6.

Department of Allergy, Kaiser Permanente Medical Center, San Diego, Calif.

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http://dx.doi.org/10.1016/j.jaip.2015.07.008DOI Listing
October 2016

Assemblytics: a web analytics tool for the detection of variants from an assembly.

Bioinformatics 2016 10 17;32(19):3021-3. Epub 2016 Jun 17.

Cold Spring Harbor Laboratory, Simons Center for Quantitative Biology, Cold Spring Harbor, NY, USA and Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.

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http://dx.doi.org/10.1093/bioinformatics/btw369DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191160PMC
October 2016

Safety of the 2010-11, 2011-12, 2012-13, and 2013-14 seasonal influenza vaccines in pregnancy: Birth defects, spontaneous abortion, preterm delivery, and small for gestational age infants, a study from the cohort arm of VAMPSS.

Vaccine 2016 08 20;34(37):4443-9. Epub 2016 Jul 20.

Department of Pediatrics, University of California San Diego, La Jolla, CA, United States; Vaccines and Medications in Pregnancy Surveillance System, United States.

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http://dx.doi.org/10.1016/j.vaccine.2016.06.054DOI Listing
August 2016

Safety of the 2011-12, 2012-13, and 2013-14 seasonal influenza vaccines in pregnancy: Preterm delivery and specific malformations, a study from the case-control arm of VAMPSS.

Vaccine 2016 08 21;34(37):4450-9. Epub 2016 Jul 21.

Slone Epidemiology Center at Boston University, Boston, MA, United States; Vaccines and Medications in Pregnancy Surveillance System (VAMPSS), United States. Electronic address:

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http://dx.doi.org/10.1016/j.vaccine.2016.06.078DOI Listing
August 2016

The safety of intranasal steroids during pregnancy: A good start.

J Allergy Clin Immunol 2016 07;138(1):105-6

Department of Allergy, Kaiser Permanente Medical Center, San Diego, Calif. Electronic address:

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http://dx.doi.org/10.1016/j.jaci.2016.04.026DOI Listing
July 2016

Comparative safety and costs of stepping down asthma medications in patients with controlled asthma.

J Allergy Clin Immunol 2016 05 21;137(5):1373-1379.e3. Epub 2015 Oct 21.

Robert D. and Patricia E. Kern Center for the Science of Health Care Delivery, Mayo Clinic, Rochester, Minn; Division of Health Care Policy and Research, Mayo Clinic, Rochester, Minn; Knowledge and Evaluation Research (KER) Unit, Mayo Clinic, Rochester, Minn.

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http://dx.doi.org/10.1016/j.jaci.2015.08.035DOI Listing
May 2016

Interactive analysis and assessment of single-cell copy-number variations.

Nat Methods 2015 Nov 7;12(11):1058-60. Epub 2015 Sep 7.

Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA.

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http://dx.doi.org/10.1038/nmeth.3578DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4775251PMC
November 2015

Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome.

Genome Res 2015 Nov 7;25(11):1750-6. Epub 2015 Oct 7.

Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1101/gr.191395.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617970PMC
November 2015

Biological data sciences in genome research.

Authors:
Michael C Schatz

Genome Res 2015 Oct;25(10):1417-22

Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1101/gr.191684.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4579325PMC
October 2015

Teaser: Individualized benchmarking and optimization of read mapping results for NGS data.

Genome Biol 2015 Oct 22;16:235. Epub 2015 Oct 22.

Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

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http://dx.doi.org/10.1186/s13059-015-0803-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4618857PMC
October 2015

Metassembler: merging and optimizing de novo genome assemblies.

Genome Biol 2015 Sep 24;16:207. Epub 2015 Sep 24.

Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

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http://dx.doi.org/10.1186/s13059-015-0764-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4581417PMC
September 2015