Michael S Rappé

Michael S Rappé

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Michael S Rappé

Michael S Rappé

Publications by authors named "Michael S Rappé"

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Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi.

ISME J 2019 05 16;13(5):1269-1279. Epub 2019 Jan 16.

Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, University of Queensland, St Lucia, QLD, Australia.

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http://dx.doi.org/10.1038/s41396-018-0343-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6474303PMC
May 2019

Elemental Composition, Phosphorous Uptake, and Characteristics of Growth of a SAR11 Strain in Batch and Continuous Culture.

mSystems 2019 May 21;4(4). Epub 2019 May 21.

Hawaii Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawaii at Manoa, Kaneohe, Hawai'i, USA

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http://dx.doi.org/10.1128/mSystems.00218-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6589437PMC
May 2019

The importance of designating type material for uncultured taxa.

Syst Appl Microbiol 2019 Jan 18;42(1):15-21. Epub 2018 Jul 18.

Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, QLD 4072, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.syapm.2018.07.003DOI Listing
January 2019

Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems.

PeerJ 2017 6;5:e3134. Epub 2017 Apr 6.

Hawaii Institute of Marine Biology, University of Hawaii at Manoa , Kaneohe , HI , United States.

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http://dx.doi.org/10.7717/peerj.3134DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5385130PMC
April 2017

Viruses in the Oceanic Basement.

mBio 2017 03 7;8(2). Epub 2017 Mar 7.

Department of Oceanography, University of Hawai'i at Mānoa, Honolulu, Hawai'i, USA

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http://dx.doi.org/10.1128/mBio.02129-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340873PMC
March 2017

Metagenome sequencing and 98 microbial genomes from Juan de Fuca Ridge flank subsurface fluids.

Sci Data 2017 03 28;4:170037. Epub 2017 Mar 28.

Hawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, Hawaii 96744, USA.

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http://dx.doi.org/10.1038/sdata.2017.37DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5369317PMC
March 2017

Novel microbial assemblages inhabiting crustal fluids within mid-ocean ridge flank subsurface basalt.

ISME J 2016 08 12;10(8):2033-47. Epub 2016 Feb 12.

Hawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, HI, USA.

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http://dx.doi.org/10.1038/ismej.2015.248DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5029167PMC
August 2016

Biogeography of planktonic and coral-associated microorganisms across the Hawaiian Archipelago.

FEMS Microbiol Ecol 2016 08 23;92(8). Epub 2016 May 23.

Hawaii Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawaii at Manoa, Kaneohe, HI 96744, USA.

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http://dx.doi.org/10.1093/femsec/fiw109DOI Listing
August 2016

Nanocalorimetric Characterization of Microbial Activity in Deep Subsurface Oceanic Crustal Fluids.

Front Microbiol 2016 5;7:454. Epub 2016 Apr 5.

Department of Earth Sciences, University of Southern California, Los AngelesCA, USA; Department of Biological Sciences, University of Southern California, Los AngelesCA, USA.

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http://dx.doi.org/10.3389/fmicb.2016.00454DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4820435PMC
April 2016

Needles in the blue sea: sub-species specificity in targeted protein biomarker analyses within the vast oceanic microbial metaproteome.

Proteomics 2015 Oct 22;15(20):3521-31. Epub 2015 Jul 22.

Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.

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http://dx.doi.org/10.1002/pmic.201400630DOI Listing
October 2015

Activity and phylogenetic diversity of sulfate-reducing microorganisms in low-temperature subsurface fluids within the upper oceanic crust.

Front Microbiol 2014 14;5:748. Epub 2015 Jan 14.

Department of Oceanography, School of Ocean and Earth Science and Technology, University of Hawaii Honolulu, HI, USA.

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http://dx.doi.org/10.3389/fmicb.2014.00748DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4295021PMC
February 2015

Stabilizing the foundation of the house that 'omics builds: the evolving value of cultured isolates to marine microbiology.

Authors:
Michael S Rappé

Curr Opin Microbiol 2013 Oct 29;16(5):618-24. Epub 2013 Oct 29.

Hawaii Institute of Marine Biology, University of Hawaii at Manoa, Kaneohe, HI 96744, USA. Electronic address:

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http://dx.doi.org/10.1016/j.mib.2013.09.009DOI Listing
October 2013

Coastal bacterioplankton community dynamics in response to a natural disturbance.

PLoS One 2013 7;8(2):e56207. Epub 2013 Feb 7.

Hawaii Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawaii, Kaneohe, Hawaii, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0056207PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3567041PMC
July 2013

Microbial diversity within basement fluids of the sediment-buried Juan de Fuca Ridge flank.

ISME J 2013 Jan 12;7(1):161-72. Epub 2012 Jul 12.

Hawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, HI 96744, USA.

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http://dx.doi.org/10.1038/ismej.2012.73DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526168PMC
January 2013

Streamlining and core genome conservation among highly divergent members of the SAR11 clade.

mBio 2012 18;3(5). Epub 2012 Sep 18.

Center for Microbial Oceanography: Research and Education, SOEST, University of Hawaii at Manoa, Honolulu, Hawaii, USA.

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http://dx.doi.org/10.1128/mBio.00252-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3448164PMC
January 2013

Non-random assembly of bacterioplankton communities in the subtropical north pacific ocean.

Front Microbiol 2011 1;2:140. Epub 2011 Jul 1.

Hawaii Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawaii Kaneohe, HI, USA.

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http://dx.doi.org/10.3389/fmicb.2011.00140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130143PMC
October 2012

Specificity of associations between bacteria and the coral Pocillopora meandrina during early development.

Appl Environ Microbiol 2012 Oct 17;78(20):7467-75. Epub 2012 Aug 17.

Hawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, Hawaii, USA.

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http://dx.doi.org/10.1128/AEM.01232-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3457095PMC
October 2012

Genome sequence of strain HIMB55, a novel marine gammaproteobacterium of the OM60/NOR5 clade.

J Bacteriol 2012 May;194(9):2393-4

Hawaii Institute of Marine Biology and Center for Microbial Oceanography: Research and Education, School of Ocean and Earth Science and Technology, University of Hawaii at Manoa, Kaneohe, Hawaii, USA.

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http://dx.doi.org/10.1128/JB.00171-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3347081PMC
May 2012

Genome sequence of strain HIMB30, a novel member of the marine Gammaproteobacteria.

J Bacteriol 2012 Feb;194(3):732-3

Hawaii Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawaii at Manoa, Kaneohe, Hawaii, USA.

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http://dx.doi.org/10.1128/JB.06506-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3264069PMC
February 2012

Humpback whales harbour a combination of specific and variable skin bacteria.

Environ Microbiol Rep 2011 Apr 27;3(2):223-32. Epub 2010 Sep 27.

University of Hawaii, Department of Oceanography, 1000 Pope Rd., Honolulu, HI 96822, USA. University of Hawaii, Hawaii Institute of Marine Biology, P.O. Box 1346, Kaneohe, HI 96744, USA. National Oceanic and Atmospheric Association, Hawaiian Islands Humpback Whale National Marine Sanctuary, 726 S. Kihei Rd, Kihei, HI 96753, USA.

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http://dx.doi.org/10.1111/j.1758-2229.2010.00213.xDOI Listing
April 2011

Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre.

Environ Microbiol 2009 Sep 1;11(9):2291-300. Epub 2009 Jun 1.

Hawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, HI 96744, USA.

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http://dx.doi.org/10.1111/j.1462-2920.2009.01954.xDOI Listing
September 2009

The onset of microbial associations in the coral Pocillopora meandrina.

ISME J 2009 Jun 26;3(6):685-99. Epub 2009 Feb 26.

Hawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, HI, USA.

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http://dx.doi.org/10.1038/ismej.2009.3DOI Listing
June 2009

Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity.

Nature 2009 Mar;458(7234):69-72

Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543, USA.

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http://dx.doi.org/10.1038/nature07659DOI Listing
March 2009

The small genome of an abundant coastal ocean methylotroph.

Environ Microbiol 2008 Jul 3;10(7):1771-82. Epub 2008 Apr 3.

Department of Microbiology, Oregon State University, Corvallis, OR, USA.

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http://dx.doi.org/10.1111/j.1462-2920.2008.01598.xDOI Listing
July 2008

High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11).

Environ Microbiol 2007 Oct;9(10):2430-40

Department of Microbiology, Oregon State University, Corvallis, OR 97331, USA.

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http://dx.doi.org/10.1111/j.1462-2920.2007.01361.xDOI Listing
October 2007

What's the 'meta' with metagenomics?

ISME J 2007 Jun 17;1(2):100-2. Epub 2007 May 17.

Department of Oceanography, University of Hawaii at Manoa, Honolulu, HI, USA.

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http://dx.doi.org/10.1038/ismej.2007.25DOI Listing
June 2007

The uncultured microbial majority.

Annu Rev Microbiol 2003 ;57:369-94

Department of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA.

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http://www.annualreviews.org/doi/10.1146/annurev.micro.57.03
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http://dx.doi.org/10.1146/annurev.micro.57.030502.090759DOI Listing
February 2004

SAR11 clade dominates ocean surface bacterioplankton communities.

Nature 2002 Dec 19-26;420(6917):806-10

Department of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA.

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http://dx.doi.org/10.1038/nature01240DOI Listing
January 2003

Fluids from aging ocean crust that support microbial life.

Science 2003 Jan;299(5603):120-3

Department of Oceanography, School of Ocean and Earth Science and Technology, University of Hawaii, Honolulu, HI 96822, USA.

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http://alrlab.pdx.edu/courses/marinemicro/cowen.pdf
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http://www.sciencemag.org/cgi/doi/10.1126/science.1075653
Publisher Site
http://dx.doi.org/10.1126/science.1075653DOI Listing
January 2003

Cultivation of the ubiquitous SAR11 marine bacterioplankton clade.

Nature 2002 Aug;418(6898):630-3

Department of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA.

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http://dx.doi.org/10.1038/nature00917DOI Listing
August 2002