Michael R Sussman

Michael R Sussman

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Michael R Sussman

Publications by authors named "Michael R Sussman"

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Noninvasive Detection of Colorectal Carcinomas Using Serum Protein Biomarkers.

J Surg Res 2019 Oct 3;246:160-169. Epub 2019 Oct 3.

Department of Surgery, University of Alabama-Birmingham, Birmingham, Alabama. Electronic address:

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http://dx.doi.org/10.1016/j.jss.2019.08.004DOI Listing
October 2019

Conserved serum protein biomarkers associated with growing early colorectal adenomas.

Proc Natl Acad Sci U S A 2019 Apr 10;116(17):8471-8480. Epub 2019 Apr 10.

McArdle Laboratory for Cancer Research, Department of Oncology, University of Wisconsin School of Medicine and Public Health, Madison, WI 53705;

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http://dx.doi.org/10.1073/pnas.1813212116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6486772PMC
April 2019

Proteome-wide Analysis of Protein Thermal Stability in the Model Higher Plant .

Mol Cell Proteomics 2019 02 6;18(2):308-319. Epub 2018 Nov 6.

From the ‡Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706;

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http://www.mcponline.org/lookup/doi/10.1074/mcp.RA118.001124
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http://dx.doi.org/10.1074/mcp.RA118.001124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6356070PMC
February 2019

Probing a Plant Plasma Membrane Receptor Kinase's Three-Dimensional Structure Using Mass Spectrometry-Based Protein Footprinting.

Biochemistry 2018 08 20;57(34):5159-5168. Epub 2018 Aug 20.

Department of Biochemistry, Biotechnology Center , University of Wisconsin , Madison , Wisconsin 53706 , United States.

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http://dx.doi.org/10.1021/acs.biochem.8b00471DOI Listing
August 2018

Comparison of the effects of a kinase-dead mutation of FERONIA on ovule fertilization and root growth of Arabidopsis.

FEBS Lett 2018 07 9;592(14):2395-2402. Epub 2018 Jul 9.

Biotechnology Center, University of Wisconsin, Madison, WI, USA.

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http://dx.doi.org/10.1002/1873-3468.13157DOI Listing
July 2018

Environmental and Genetic Factors Regulating Localization of the Plant Plasma Membrane H-ATPase.

Plant Physiol 2018 01 17;176(1):364-377. Epub 2017 Oct 17.

Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706

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http://dx.doi.org/10.1104/pp.17.01126DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5761788PMC
January 2018

Ligand Receptor-Mediated Regulation of Growth in Plants.

Curr Top Dev Biol 2017 11;123:331-363. Epub 2017 Jan 11.

University of Wisconsin-Madison, Madison, WI, United States. Electronic address:

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http://dx.doi.org/10.1016/bs.ctdb.2016.11.007DOI Listing
May 2017

Examination of Endogenous Peptides in Medicago truncatula Using Mass Spectrometry Imaging.

J Proteome Res 2016 12 11;15(12):4403-4411. Epub 2016 Oct 11.

Department of Chemistry, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States.

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http://dx.doi.org/10.1021/acs.jproteome.6b00471DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6314849PMC
December 2016

Rapid Oligo-Galacturonide Induced Changes in Protein Phosphorylation in Arabidopsis.

Mol Cell Proteomics 2016 Apr 25;15(4):1351-9. Epub 2016 Jan 25.

From the ‡Biology Department, Bowdoin College, Brunswick, ME, 04011;

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http://dx.doi.org/10.1074/mcp.M115.055368DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824860PMC
April 2016

Regulation of the plasma membrane proton pump (H(+)-ATPase) by phosphorylation.

Curr Opin Plant Biol 2015 Dec 24;28:68-75. Epub 2015 Oct 24.

Biotechnology Center and Department of Biochemistry, University of Wisconsin-Madison, United States. Electronic address:

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http://dx.doi.org/10.1016/j.pbi.2015.09.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4679459PMC
December 2015

Potential regulatory phosphorylation sites in a Medicago truncatula plasma membrane proton pump implicated during early symbiotic signaling in roots.

FEBS Lett 2015 Aug 17;589(17):2186-93. Epub 2015 Jul 17.

Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, United States; Biotechnology Center, University of Wisconsin-Madison, Madison, WI 53706, United States. Electronic address:

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http://dx.doi.org/10.1016/j.febslet.2015.06.035DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991090PMC
August 2015

Rapid Phosphoproteomic Effects of Abscisic Acid (ABA) on Wild-Type and ABA Receptor-Deficient A. thaliana Mutants.

Mol Cell Proteomics 2015 May 18;14(5):1169-82. Epub 2015 Feb 18.

Department of Biochemistry and Biotechnology Center, University of Wisconsin, Madison, Wisconsin, 53706.

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http://dx.doi.org/10.1074/mcp.M114.043307DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4424391PMC
May 2015

The concentrations of EGFR, LRG1, ITIH4, and F5 in serum correlate with the number of colonic adenomas in ApcPirc/+ rats.

Cancer Prev Res (Phila) 2014 Nov 8;7(11):1160-9. Epub 2014 Sep 8.

Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin. Biotechnology Center, University of Wisconsin-Madison, Madison, Wisconsin.

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http://dx.doi.org/10.1158/1940-6207.CAPR-14-0056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4221466PMC
November 2014

Phosphoproteomic Analyses Reveal Early Signaling Events in the Osmotic Stress Response.

Plant Physiol 2014 07 7;165(3):1171-1187. Epub 2014 May 7.

Department of Biochemistry and Biotechnology Center, University of Wisconsin, Madison, Wisconsin 53706

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http://www.plantphysiol.org/cgi/doi/10.1104/pp.114.238816
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http://dx.doi.org/10.1104/pp.114.238816DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4081330PMC
July 2014

A pipeline for 15N metabolic labeling and phosphoproteome analysis in Arabidopsis thaliana.

Methods Mol Biol 2014 ;1062:353-79

Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.

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http://dx.doi.org/10.1007/978-1-62703-580-4_19DOI Listing
April 2014

Expression of a translationally fused TAP-tagged plasma membrane proton pump in Arabidopsis thaliana.

Biochemistry 2014 Jan 15;53(3):566-78. Epub 2014 Jan 15.

Department of Biochemistry, Biotechnology Center, University of Wisconsin , 425 Henry Mall, Madison, Wisconsin 53706, United States.

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http://pubs.acs.org/doi/10.1021/bi401096m
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http://dx.doi.org/10.1021/bi401096mDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985734PMC
January 2014

A peptide hormone and its receptor protein kinase regulate plant cell expansion.

Science 2014 Jan;343(6169):408-11

Biotechnology Center, University of Wisconsin, Madison, WI 53706, USA.

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http://dx.doi.org/10.1126/science.1244454DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4672726PMC
January 2014

Candidate serum biomarkers for early intestinal cancer using 15N metabolic labeling and quantitative proteomics in the ApcMin/+ mouse.

J Proteome Res 2013 Sep 8;12(9):4152-66. Epub 2013 Aug 8.

Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States.

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http://dx.doi.org/10.1021/pr400467cDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792563PMC
September 2013

Symbiosis and the social network of higher plants.

Curr Opin Plant Biol 2013 Feb 13;16(1):118-27. Epub 2012 Dec 13.

Department of Agronomy, University of Wisconsin, Madison, WI 53706, United States.

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http://dx.doi.org/10.1016/j.pbi.2012.11.007DOI Listing
February 2013

A proteogenomic survey of the Medicago truncatula genome.

Mol Cell Proteomics 2012 Oct 5;11(10):933-44. Epub 2012 Jul 5.

Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1074/mcp.M112.019471DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3494139PMC
October 2012

Metabolomic profiling reveals suppression of oxylipin biosynthesis during the early stages of legume-rhizobia symbiosis.

FEBS Lett 2012 Sep 13;586(19):3150-8. Epub 2012 Jul 13.

Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1016/j.febslet.2012.06.046DOI Listing
September 2012

DNA millichips as a low-cost platform for gene expression analysis.

Plant Physiol 2012 Jun 13;159(2):548-57. Epub 2012 Apr 13.

Department of Biochemistry, Biotechnology Center, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1104/pp.112.195230DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3375923PMC
June 2012

The effect of a genetically reduced plasma membrane protonmotive force on vegetative growth of Arabidopsis.

Plant Physiol 2012 Mar 3;158(3):1158-71. Epub 2012 Jan 3.

Biotechnology Center, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1104/pp.111.189167DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3291248PMC
March 2012

Quantitative plant phosphoproteomics.

Curr Opin Plant Biol 2011 Oct 18;14(5):507-11. Epub 2011 Jul 18.

University of Wisconsin-Madison Biotechnology Center and Department of Biochemistry, 425 Henry Mall, Madison, WI 53706, USA.

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http://dx.doi.org/10.1016/j.pbi.2011.06.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3253357PMC
October 2011

Abscisic acid receptors.

Plant Physiol 2010 Oct;154(2):479-82

Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1104/pp.110.160846DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2949029PMC
October 2010

In planta changes in protein phosphorylation induced by the plant hormone abscisic acid.

Proc Natl Acad Sci U S A 2010 Sep 23;107(36):15986-91. Epub 2010 Aug 23.

Biotechnology Center, Department of Biochemistry, University of Wisconsin, Madison, 53706, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.1007879107
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http://dx.doi.org/10.1073/pnas.1007879107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2936636PMC
September 2010

Protein quantitation using isotope-assisted mass spectrometry.

Annu Rev Biophys 2010 ;39:291-308

Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1146/annurev.biophys.093008.131339DOI Listing
July 2010

Democratization and integration of genomic profiling tools.

Methods Mol Biol 2009 ;553:373-93

Department of Biochemistry, UW Biotechnology Center, University of Wisconsin-Madison, Madison, WI, USA.

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http://link.springer.com/10.1007/978-1-60327-563-7_20
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http://dx.doi.org/10.1007/978-1-60327-563-7_20DOI Listing
January 2010

Plant science. How plant cells go to sleep for a long, long time.

Science 2009 Dec;326(5958):1356-7

Biotechnology Center and the Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.

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http://dx.doi.org/10.1126/science.1184135DOI Listing
December 2009

The Phaeodactylum genome reveals the evolutionary history of diatom genomes.

Nature 2008 Nov 15;456(7219):239-44. Epub 2008 Oct 15.

CNRS UMR8186, Department of Biology, Ecole Normale Supérieure, 46 rue d'Ulm, 75005 Paris, France.

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http://dx.doi.org/10.1038/nature07410DOI Listing
November 2008

Matching isotopic distributions from metabolically labeled samples.

Bioinformatics 2008 Jul;24(13):i339-47

Department of Computer Sciences, University of Wisconsin, Madison, WI, USA.

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http://dx.doi.org/10.1093/bioinformatics/btn190DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2718665PMC
July 2008

A cytoplasmic Ca2+ functional assay for identifying and purifying endogenous cell signaling peptides in Arabidopsis seedlings: identification of AtRALF1 peptide.

Biochemistry 2008 Jun 22;47(24):6311-21. Epub 2008 May 22.

UW Biotechnology Center, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1021/bi8001488DOI Listing
June 2008

Transcriptional changes in response to growth of Arabidopsis in high external calcium.

FEBS Lett 2008 Mar 26;582(6):967-76. Epub 2008 Feb 26.

University of Wisconsin-Whitewater, Department of Biological Sciences, 800 W. Main Street, Upham Hall Room 209, Whitewater, WI 53190, USA.

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http://doi.wiley.com/10.1016/j.febslet.2008.02.043
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http://dx.doi.org/10.1016/j.febslet.2008.02.043DOI Listing
March 2008

Tandem phosphorylation of Ser-911 and Thr-912 at the C terminus of yeast plasma membrane H+-ATPase leads to glucose-dependent activation.

J Biol Chem 2007 Dec 11;282(49):35471-81. Epub 2007 Oct 11.

Department of Genetics and Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06511, USA.

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http://dx.doi.org/10.1074/jbc.M706094200DOI Listing
December 2007

Method for determining molar concentrations of metabolites in complex solutions from two-dimensional 1H-13C NMR spectra.

Anal Chem 2007 Dec 7;79(24):9385-90. Epub 2007 Nov 7.

Department of Biochemistry, University of Wisconsin-Madison, 433 Babcock Drive, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1021/ac071583zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2533272PMC
December 2007

New bioinformatics resources for metabolomics.

Pac Symp Biocomput 2007 :157-68

Department of Biochemistry, University of Wisconsin-Madison, 433 Babcock Drive, Madison, Wisconsin 53706, USA.

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December 2007

Stable isotope assisted assignment of elemental compositions for metabolomics.

Anal Chem 2007 Sep 21;79(18):6912-21. Epub 2007 Aug 21.

Department of Biochemistry, University of Wisconsin, 433 Babcock Drive, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1021/ac070346tDOI Listing
September 2007

Identification of an in vitro transcription-based artifact affecting oligonucleotide microarrays.

FEBS Lett 2007 Jul 26;581(18):3363-70. Epub 2007 Jun 26.

Biotechnology Center and Biochemistry Department, University of Wisconsin, 425 Henry Mall, Madison, WI 53706, USA.

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http://dx.doi.org/10.1016/j.febslet.2007.06.033DOI Listing
July 2007

Comparison of full versus partial metabolic labeling for quantitative proteomics analysis in Arabidopsis thaliana.

Mol Cell Proteomics 2007 May 9;6(5):860-81. Epub 2007 Feb 9.

Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://www.mcponline.org/content/6/5/860.full.pdf
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http://www.mcponline.org/cgi/doi/10.1074/mcp.M600347-MCP200
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http://dx.doi.org/10.1074/mcp.M600347-MCP200DOI Listing
May 2007

Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana.

Proteomics 2007 Apr;7(8):1279-92

Department of Comparative Biosciences, University of Wisconsin, Madison, WI, USA.

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http://doi.wiley.com/10.1002/pmic.200600832
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http://dx.doi.org/10.1002/pmic.200600832DOI Listing
April 2007

A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling.

Mol Cell Proteomics 2006 Aug 24;5(8):1382-95. Epub 2006 Apr 24.

Biotechnology Center, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1074/mcp.M500414-MCP200DOI Listing
August 2006

Cytokinins regulate a bidirectional phosphorelay network in Arabidopsis.

Curr Biol 2006 Jun;16(11):1116-22

Plant Molecular Biology Laboratory, Institute of Biotechnology, University of Helsinki, Post office box 56, FIN-00014 Helsinki, Finland.

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http://dx.doi.org/10.1016/j.cub.2006.04.030DOI Listing
June 2006

A transcriptome-based characterization of habituation in plant tissue culture.

Plant Physiol 2006 Apr 17;140(4):1255-78. Epub 2006 Feb 17.

University of Wisconsin Biotechnology Center and Department of Biochemistry, Madison, Wisconsin 53706, USA.

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http://www.plantphysiol.org/cgi/doi/10.1104/pp.105.076059
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http://dx.doi.org/10.1104/pp.105.076059DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1435795PMC
April 2006

Correcting errors in synthetic DNA through consensus shuffling.

Nucleic Acids Res 2005 Mar 30;33(6):e55. Epub 2005 Mar 30.

Department of Biochemistry, University of Wisconsin-Madison Madison, WI 53706, USA.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gni053DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1072806PMC
March 2005

An Arabidopsis thaliana plasma membrane proton pump is essential for pollen development.

Genetics 2004 Nov;168(3):1677-87

Program in Cellular and Molecular Biology, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1534/genetics.104.032326DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1448765PMC
November 2004

In planta functions of the Arabidopsis cytokinin receptor family.

Proc Natl Acad Sci U S A 2004 Jun 27;101(23):8821-6. Epub 2004 May 27.

Department of Biology, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.

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http://dx.doi.org/10.1073/pnas.0402887101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC423279PMC
June 2004

An isotope labeling strategy for quantifying the degree of phosphorylation at multiple sites in proteins.

J Am Soc Mass Spectrom 2004 May;15(5):647-53

Biotechnology Center, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1016/j.jasms.2003.12.019DOI Listing
May 2004

Genomic comparison of P-type ATPase ion pumps in Arabidopsis and rice.

Plant Physiol 2003 Jun;132(2):618-28

Department of Cell Biology, Plant Division, The Scripps Research Institute, La Jolla, California 92037, USA.

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http://www.plantphysiol.org/cgi/doi/10.1104/pp.103.021923
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http://dx.doi.org/10.1104/pp.103.021923DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC167002PMC
June 2003

Altered shoot/root Na+ distribution and bifurcating salt sensitivity in Arabidopsis by genetic disruption of the Na+ transporter AtHKT1.

FEBS Lett 2002 Nov;531(2):157-61

Division of Biological Sciences, Cell and Developmental Biology Section, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0116, USA.

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http://dx.doi.org/10.1016/s0014-5793(02)03488-9DOI Listing
November 2002

An Arabidopsis histidine kinase is essential for megagametogenesis.

Proc Natl Acad Sci U S A 2002 Nov 8;99(24):15800-5. Epub 2002 Nov 8.

Biotechnology Center, University of Wisconsin, 425 Henry Mall, Madison 53706, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.232580499
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http://dx.doi.org/10.1073/pnas.232580499DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC137796PMC
November 2002

An endoplasmic reticulum-bound Ca(2+)/Mn(2+) pump, ECA1, supports plant growth and confers tolerance to Mn(2+) stress.

Plant Physiol 2002 Sep;130(1):128-37

Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742, USA.

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http://dx.doi.org/10.1104/pp.004440DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC166546PMC
September 2002

An Arabidopsis mitogen-activated protein kinase kinase kinase gene family encodes essential positive regulators of cytokinesis.

Plant Cell 2002 May;14(5):1109-20

Biotechnology Center, University of Wisconsin-Madison, 425 Henry Mall, Madison, Wisconsin 53706, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC150610PMC
http://dx.doi.org/10.1105/tpc.001164DOI Listing
May 2002