Publications by authors named "Michael R Rossi"

58Publications

Critical role of ASCT2-mediated amino acid metabolism in promoting leukaemia development and progression.

Authors:
Fang Ni Wen-Mei Yu Zhiguo Li Douglas K Graham Lingtao Jin Sumin Kang Michael R Rossi Shiyong Li Hal E Broxmeyer Cheng-Kui Qu

Nat Metab 2019 03 11;1(3):390-403. Epub 2019 Mar 11.

Department of Pediatrics, Division of Hematology/Oncology, Aflac Cancer and Blood Disorders Center.

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March 2019

Multi-faceted computational assessment of risk and progression in oligodendroglioma implicates NOTCH and PI3K pathways.

Authors:
Sameer H Halani Safoora Yousefi Jose Velazquez Vega Michael R Rossi Zheng Zhao Fatemeh Amrollahi Chad A Holder Amelia Baxter-Stoltzfus Jennifer Eschbacher Brent Griffith Jeffrey J Olson Tao Jiang Joseph R Yates Charles G Eberhart Laila M Poisson Lee A D Cooper Daniel J Brat

NPJ Precis Oncol 2018 6;2:24. Epub 2018 Nov 6.

14Department of Pathology, Northwestern University Feinberg School of Medicine, Chicago, IL USA.

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November 2018

Common cancer-driver mutations and their association with abnormally methylated genes in lung adenocarcinoma from never-smokers.

Authors:
Mathewos Tessema Michael R Rossi Maria A Picchi Christin M Yingling Yong Lin Suresh S Ramalingam Steven A Belinsky

Lung Cancer 2018 09 11;123:99-106. Epub 2018 Jul 11.

Lung Cancer Program, Lovelace Respiratory Research Institute, Albuquerque, NM, USA. Electronic address:

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September 2018

Validation of a Customized Bioinformatics Pipeline for a Clinical Next-Generation Sequencing Test Targeting Solid Tumor-Associated Variants.

Authors:
Thomas Schneider Geoffrey H Smith Michael R Rossi Charles E Hill Linsheng Zhang

J Mol Diagn 2018 05 19;20(3):355-365. Epub 2018 Feb 19.

Department of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia. Electronic address:

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May 2018

The Impact of Smoking and TP53 Mutations in Lung Adenocarcinoma Patients with Targetable Mutations-The Lung Cancer Mutation Consortium (LCMC2).

Authors:
Dara L Aisner Lynette M Sholl Lynne D Berry Michael R Rossi Heidi Chen Junya Fujimoto Andre L Moreira Suresh S Ramalingam Liza C Villaruz Gregory A Otterson Eric Haura Katerina Politi Bonnie Glisson Jeremy Cetnar Edward B Garon Joan Schiller Saiama N Waqar Lecia V Sequist Julie Brahmer Yu Shyr Kelly Kugler Ignacio I Wistuba Bruce E Johnson John D Minna Mark G Kris Paul A Bunn David J Kwiatkowski

Clin Cancer Res 2018 03 7;24(5):1038-1047. Epub 2017 Dec 7.

Brigham and Women's Hospital, Boston, Massachusetts.

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March 2018

Next-generation sequencing and clinical outcomes of patients with lung adenocarcinoma treated with stereotactic body radiotherapy.

Authors:
Richard J Cassidy Xinyan Zhang Pretesh R Patel Joseph W Shelton Chase E Escott Gabriel L Sica Michael R Rossi Charles E Hill Conor E Steuer Rathi N Pillai Suresh S Ramalingam Taofeek K Owonikoko Madhusmita Behera Seth D Force Felix G Fernandez Walter J Curran Kristin A Higgins

Cancer 2017 Oct 13;123(19):3681-3690. Epub 2017 Jun 13.

Department of Radiation Oncology, Winship Cancer Institute of Emory University, Atlanta, Georgia.

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October 2017

CD36-positive B-lymphoblasts Predict Poor Outcome in Children With B-lymphoblastic Leukemia.

Authors:
Joanna G Newton John T Horan Scott Newman Michael R Rossi Rhett P Ketterling Sunita I Park

Pediatr Dev Pathol 2017 Jun 8;20(3):224-231. Epub 2017 Feb 8.

6 Department of Pathology, Children's Healthcare of Atlanta - Egleston, Emory University, Atlanta, Georgia, USA.

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June 2017

Targeting adhesion signaling in mutant lung adenocarcinoma.

Authors:
Melissa Gilbert-Ross Jessica Konen Junghui Koo John Shupe Brian S Robinson Walter Guy Wiles Chunzi Huang W David Martin Madhusmita Behera Geoffrey H Smith Charles E Hill Michael R Rossi Gabriel L Sica Manali Rupji Zhengjia Chen Jeanne Kowalski Andrea L Kasinski Suresh S Ramalingam Haian Fu Fadlo R Khuri Wei Zhou Adam I Marcus

JCI Insight 2017 03 9;2(5):e90487. Epub 2017 Mar 9.

Department of Hematology and Medical Oncology, Emory University School of Medicine.

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March 2017

Genomic Analysis in the Practice of Surgical Neuropathology: The Emory Experience.

Authors:
Stewart G Neill Debra F Saxe Michael R Rossi Matthew J Schniederjan Daniel J Brat

Arch Pathol Lab Med 2017 Mar;141(3):355-365

From the Departments of Pathology and Laboratory Medicine (Drs Neill, Saxe, Rossi, Schniederjan, and Brat) and Radiation Oncology (Dr Rossi), Winship Cancer Institute, Emory University School of Medicine, Atlanta, Georgia; and the Department of Pathology, Children's Healthcare of Atlanta, Atlanta, Georgia (Dr Schniederjan).

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March 2017

Multi-Institutional FASTQ File Exchange as a Means of Proficiency Testing for Next-Generation Sequencing Bioinformatics and Variant Interpretation.

Authors:
Kurtis D Davies Midhat S Farooqi Mike Gruidl Charles E Hill Julie Woolworth-Hirschhorn Heather Jones Kenneth L Jones Anthony Magliocco Midori Mitui Philip H O'Neill Rebecca O'Rourke Nirali M Patel Dahui Qin Erica Ramos Michael R Rossi Thomas M Schneider Geoffrey H Smith Linsheng Zhang Jason Y Park Dara L Aisner

J Mol Diagn 2016 07 4;18(4):572-9. Epub 2016 May 4.

Department of Pathology, University of Colorado-Anschutz Medical Campus, Denver, Colorado. Electronic address:

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July 2016

Patient-derived xenografts faithfully replicated clinical outcome in a phase II co-clinical trial of arsenic trioxide in relapsed small cell lung cancer.

Authors:
Taofeek K Owonikoko Guojing Zhang Hyun S Kim Renea M Stinson Rabih Bechara Chao Zhang Zhengjia Chen Nabil F Saba Suchita Pakkala Rathi Pillai Xingming Deng Shi-Yong Sun Michael R Rossi Gabriel L Sica Suresh S Ramalingam Fadlo R Khuri

J Transl Med 2016 05 3;14(1):111. Epub 2016 May 3.

Department of Hematology & Medical Oncology, Emory University School of Medicine, Winship Cancer Institute, 1365C Clifton Road, NE, Suite C3080, Atlanta, GA, 30322, USA.

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May 2016

Gene integrated set profile analysis: a context-based approach for inferring biological endpoints.

Authors:
Jeanne Kowalski Bhakti Dwivedi Scott Newman Jeffery M Switchenko Rini Pauly David A Gutman Jyoti Arora Khanjan Gandhi Kylie Ainslie Gregory Doho Zhaohui Qin Carlos S Moreno Michael R Rossi Paula M Vertino Sagar Lonial Leon Bernal-Mizrachi Lawrence H Boise

Nucleic Acids Res 2016 Apr 29;44(7):e69. Epub 2016 Jan 29.

Winship Cancer Institute, Emory University, Atlanta, GA 30333, USA Department of Hematology and Medical Oncology, School of Medicine, Emory University, Atlanta, GA 30322, USA.

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April 2016

Clinical Validation and Implementation of a Targeted Next-Generation Sequencing Assay to Detect Somatic Variants in Non-Small Cell Lung, Melanoma, and Gastrointestinal Malignancies.

Authors:
Kevin E Fisher Linsheng Zhang Jason Wang Geoffrey H Smith Scott Newman Thomas M Schneider Rathi N Pillai Ragini R Kudchadkar Taofeek K Owonikoko Suresh S Ramalingam David H Lawson Keith A Delman Bassel F El-Rayes Malania M Wilson H Clifford Sullivan Annie S Morrison Serdar Balci N Volkan Adsay Anthony A Gal Gabriel L Sica Debra F Saxe Karen P Mann Charles E Hill Fadlo R Khuri Michael R Rossi

J Mol Diagn 2016 Mar 20;18(2):299-315. Epub 2016 Jan 20.

Department of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia; Department of Radiation Oncology, Emory University School of Medicine, Atlanta, Georgia.

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March 2016

Farewell to GBM-O: Genomic and transcriptomic profiling of glioblastoma with oligodendroglioma component reveals distinct molecular subgroups.

Authors:
Benjamin H Hinrichs Scott Newman Christina L Appin William Dunn Lee Cooper Rini Pauly Jeanne Kowalski Michael R Rossi Daniel J Brat

Acta Neuropathol Commun 2016 Jan 13;4. Epub 2016 Jan 13.

Department of Pathology and Laboratory Medicine, Emory University School of Medicine, 1648 Pierce Dr NE, Atlanta, GA, 30307, USA.

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January 2016

A new method for temperature-field reconstruction during ultrasound-monitored cryosurgery using potential-field analogy.

Authors:
Chandrajit Thaokar Michael R Rossi Yoed Rabin

Cryobiology 2016 Feb 14;72(1):69-77. Epub 2015 Nov 14.

Biothermal Technology Laboratory, Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, United States. Electronic address:

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February 2016

A multicenter, cross-platform clinical validation study of cancer cytogenomic arrays.

Authors:
Marilyn M Li Federico A Monzon Jaclyn A Biegel Vaidehi Jobanputra Jennifer J Laffin Brynn Levy Annette Leon Patricia Miron Michael R Rossi Gokce Toruner Karla Alvarez Gregory Doho Margaret J Dougherty Xiaofeng Hu Shera Kash Deanna Streck Iya Znoyko Jill M Hagenkord Daynna J Wolff

Cancer Genet 2015 Nov 28;208(11):525-36. Epub 2015 Aug 28.

Medical University of South Carolina, Charleston, SC, USA.

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November 2015

Anaplastic lymphoma kinase (ALK) gene alteration in signet ring cell carcinoma of the gastrointestinal tract.

Authors:
Olatunji B Alese Bassel F El-Rayes Gabriel Sica Guojing Zhang Dianne Alexis Francisco G La Rosa Marileila Varella-Garcia Zhengjia Chen Michael R Rossi Nazim V Adsay Fadlo R Khuri Taofeek K Owonikoko

Ther Adv Med Oncol 2015 Mar;7(2):56-62

Department of Hematology and Medical Oncology, Emory University School of Medicine, 1365 Clifton Road, NE, Room C3080, Atlanta, GA 30322, USA.

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March 2015

A Translational, Pharmacodynamic, and Pharmacokinetic Phase IB Clinical Study of Everolimus in Resectable Non-Small Cell Lung Cancer.

Authors:
Taofeek K Owonikoko Suresh S Ramalingam Daniel L Miller Seth D Force Gabriel L Sica Jennifer Mendel Zhengjia Chen Andre Rogatko Mourad Tighiouart R Donald Harvey Sungjin Kim Nabil F Saba Allan Pickens Madhusmita Behera Robert W Fu Michael R Rossi William F Auffermann William E Torres Rabih Bechara Xingming Deng Shi-Yong Sun Haian Fu Anthony A Gal Fadlo R Khuri

Clin Cancer Res 2015 Apr 11;21(8):1859-68. Epub 2015 Feb 11.

Department of Hematology and Medical Oncology, Emory University, Atlanta, Georgia. Winship Cancer Institute of Emory University, Atlanta, Georgia.

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April 2015

Open pipelines for integrated tumor genome profiles reveal differences between pancreatic cancer tumors and cell lines.

Authors:
Jeremy Goecks Bassel F El-Rayes Shishir K Maithel H Jean Khoury James Taylor Michael R Rossi

Cancer Med 2015 Mar 4;4(3):392-403. Epub 2015 Jan 4.

Computational Biology Institute, George Washington University, Ashburn, Virginia, 20147.

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March 2015

Section IV: non-small cell lung cancer and malignant melanoma.

Authors:
Kevin E Fisher Rathi N Pillai Ragini R Kudchadkar Michael R Rossi

Curr Probl Cancer 2014 Sep-Oct;38(5):180-98. Epub 2014 Aug 14.

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June 2015