Michael J Becich

Michael J Becich

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Michael J Becich

Michael J Becich

Publications by authors named "Michael J Becich"

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Workshop summary: Potential usefulness and feasibility of a US National Mesothelioma Registry.

Am J Ind Med 2020 Feb 19;63(2):105-114. Epub 2019 Nov 19.

Respiratory Health Division, National Institute for Occupational Safety and Health, Centers for Disease Control and Prevention, Morgantown, West Virginia.

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http://dx.doi.org/10.1002/ajim.23062DOI Listing
February 2020

Computer Science, Biology and Biomedical Informatics academy: Outcomes from 5 years of Immersing High-school Students into Informatics Research.

J Pathol Inform 2017 28;8. Epub 2017 Feb 28.

Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.

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http://dx.doi.org/10.4103/2153-3539.201110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5359992PMC
February 2017

Validation of a Gene Expression Test for Mesothelioma Prognosis in Formalin-Fixed Paraffin-Embedded Tissues.

J Mol Diagn 2017 01 15;19(1):65-71. Epub 2016 Nov 15.

Thoracic Surgery Oncology Laboratory and the International Mesothelioma Program, Division of Thoracic Surgery, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2016.07.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5225306PMC
January 2017

Computational Pathology: A Path Ahead.

Arch Pathol Lab Med 2016 Jan 22;140(1):41-50. Epub 2015 Jun 22.

From the Department of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston (Drs Louis, Dighe, and Gilbertson); the Department of Pathology and Laboratory Medicine, Perelman School of Medicine at the University of Pennsylvania, Philadelphia (Dr Feldman); the Department of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia (Dr Carter); the Department of Pathology and Immunology, Washington University School of Medicine, St Louis, Missouri (Dr Pfeifer); the Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts (Drs Bry, Gerber, and Golden); the Department of Biomedical Informatics, Stony Brook University, Stony Brook, New York (Drs Almeida and Saltz); the Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles (Dr Braun); the Department of Pathology and Anatomical Science, State University of New York at Buffalo (Dr Tomaszewski); the Department of Pathology, Yale Medical School, New Haven, Connecticut (Dr Sinard); the Department of Pathology and Laboratory Medicine, Stanford University, Palo Alto, California (Dr Galli); and the Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania (Dr Becich).

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http://dx.doi.org/10.5858/arpa.2015-0093-SADOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4996078PMC
January 2016

The center for causal discovery of biomedical knowledge from big data.

J Am Med Inform Assoc 2015 Nov 2;22(6):1132-6. Epub 2015 Jul 2.

Dietrich College of Humanities and Social Sciences, Carnegie Mellon University, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1093/jamia/ocv059DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009908PMC
November 2015

High Incidence of Somatic BAP1 alterations in sporadic malignant mesothelioma.

J Thorac Oncol 2015 Apr;10(4):565-76

*University of Hawai'i Cancer Center, University of Hawai'i, Honolulu, Hawaii; †Hamon Center for Therapeutic Oncology Research and Department of Pathology, UT Southwestern Medical Center, Dallas, Texas; ‡Department of Biomedical Sciences and Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, California; §Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania; and ‖Department of Cardiothoracic Surgery, New York University Langone Medical Center, New York, New York.

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http://dx.doi.org/10.1097/JTO.0000000000000471DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408084PMC
April 2015

Finding collaborators: toward interactive discovery tools for research network systems.

J Med Internet Res 2014 Nov 4;16(11):e244. Epub 2014 Nov 4.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, United States.

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http://dx.doi.org/10.2196/jmir.3444DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4376239PMC
November 2014

Creating a pipeline of talent for informatics: STEM initiative for high school students in computer science, biology, and biomedical informatics.

J Pathol Inform 2014 28;5(1):12. Epub 2014 Mar 28.

Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, Pittsburgh, USA.

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http://dx.doi.org/10.4103/2153-3539.129448DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4030307PMC
May 2014

Use of automated image analysis in evaluation of Mesothelioma Tissue Microarray (TMA) from National Mesothelioma Virtual Bank.

Pathol Res Pract 2014 Feb 14;210(2):79-82. Epub 2013 Nov 14.

Department of Biomedical Informatics, Department of Pathology at University of Pittsburgh Medical Center, Pittsburgh, PA, United States.

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https://linkinghub.elsevier.com/retrieve/pii/S03440338130022
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http://dx.doi.org/10.1016/j.prp.2013.09.002DOI Listing
February 2014

Evaluating de novo locus-disease discoveries in GWAS using the signal-to-noise ratio.

AMIA Annu Symp Proc 2011 22;2011:617-24. Epub 2011 Oct 22.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243170PMC
February 2013

Next generation sequencing in clinical medicine: Challenges and lessons for pathology and biomedical informatics.

J Pathol Inform 2012 31;3:40. Epub 2012 Oct 31.

Department of Pathology, University of Pittsburgh Medical Centre, A701, Scaife Hall, 3550 Terrace Street, Pittsburgh, PA.

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http://dx.doi.org/10.4103/2153-3539.103013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3519097PMC
December 2012

A bayesian method for evaluating and discovering disease loci associations.

PLoS One 2011 10;6(8):e22075. Epub 2011 Aug 10.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.

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http://www.dbmi.pitt.edu/sites/default/files/Jiang_3.pdf
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http://dx.plos.org/10.1371/journal.pone.0022075
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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0022075PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3154195PMC
December 2011

Immunohistochemical staining of slit2 in primary and metastatic prostatic adenocarcinoma.

Transl Oncol 2011 Oct 1;4(5):314-20. Epub 2011 Oct 1.

University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3162306PMC
http://dx.doi.org/10.1593/tlo.11151DOI Listing
October 2011

Immunohistochemical staining of radixin and moesin in prostatic adenocarcinoma.

BMC Clin Pathol 2011 Jan 14;11. Epub 2011 Jan 14.

Department of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1186/1472-6890-11-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3029218PMC
January 2011

Immunohistochemical profiles of claudin-3 in primary and metastatic prostatic adenocarcinoma.

Diagn Pathol 2011 Jan 21;6:12. Epub 2011 Jan 21.

University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1186/1746-1596-6-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3033791PMC
January 2011

Unintended consequences of health information technology: a need for biomedical informatics.

J Biomed Inform 2010 Oct 7;43(5):828-30. Epub 2009 Jun 7.

School of Health Information Sciences, The University of Texas Health Science Center at Houston, Houston, TX 77030, USA.

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http://dx.doi.org/10.1016/j.jbi.2009.05.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2891863PMC
October 2010

Automated ancillary cancer history classification for mesothelioma patients from free-text clinical reports.

J Pathol Inform 2010 Oct 11;1:24. Epub 2010 Oct 11.

Department of Biomedical Informatics, University of Pittsburgh, 200 Meyran Avenue, Pittsburgh, PA; USA.

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http://dx.doi.org/10.4103/2153-3539.71065DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2956176PMC
October 2010

The tissue microarray OWL schema: An open-source tool for sharing tissue microarray data.

J Pathol Inform 2010 Jul 13;1. Epub 2010 Jul 13.

Department of Pathology, Roswell Park Cancer Institute, Elm and Carlton St, Buffalo 14263, NY, USA.

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http://dx.doi.org/10.4103/2153-3539.65347DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2929536PMC
July 2010

Telepathology for patient care: what am I getting myself into?

Adv Anat Pathol 2010 Mar;17(2):130-49

School of Electrical and Computer Engineering, Georgia Institute of Technology, USA.

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http://pdfs.journals.lww.com/anatomicpathology/2010/03000/Te
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http://content.wkhealth.com/linkback/openurl?sid=WKPTLP:land
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http://dx.doi.org/10.1097/PAP.0b013e3181cfb788DOI Listing
March 2010

Development of an instrument for measuring clinicians' power perceptions in the workplace.

J Biomed Inform 2008 Dec 4;41(6):1041-9. Epub 2008 Mar 4.

Department of Biomedical Informatics, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1016/j.jbi.2008.02.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2613543PMC
December 2008

A multidisciplinary approach to honest broker services for tissue banks and clinical data: a pragmatic and practical model.

Cancer 2008 Oct;113(7):1705-15

Department of Pathology, University of Pittsburgh, UPMC Shadyside-Presbyterian Hospital, Pittsburgh, Pennsylvania 15232, USA.

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http://doi.wiley.com/10.1002/cncr.23768
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http://dx.doi.org/10.1002/cncr.23768DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2745185PMC
October 2008

Towards a data sharing culture: recommendations for leadership from academic health centers.

PLoS Med 2008 Sep 2;5(9):e183. Epub 2008 Sep 2.

Department of Biomedical Informatics, University of Pittsburgh Medical School, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1371/journal.pmed.0050183DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2528049PMC
September 2008

Prevalence of incidental prostate cancer in the general population: a study of healthy organ donors.

J Urol 2008 Mar 22;179(3):892-5; discussion 895. Epub 2008 Jan 22.

Department of Pathology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1016/j.juro.2007.10.057DOI Listing
March 2008

The importance of pathology informatics in translational research.

Adv Anat Pathol 2007 Sep;14(5):320-2

Department of Biomedical Informatics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15232, USA.

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http://dx.doi.org/10.1097/PAP.0b013e3180ca8a79DOI Listing
September 2007

In vitro transcription amplification and labeling methods contribute to the variability of gene expression profiling with DNA microarrays.

J Mol Diagn 2006 May;8(2):183-92

Department of Pathology, Center for Pathology Informatics, University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania 15237, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1867595PMC
http://dx.doi.org/10.2353/jmoldx.2006.050077DOI Listing
May 2006

Database construction for improving patient safety by examining pathology errors.

Am J Clin Pathol 2005 Oct;124(4):500-9

Department of Pathology, University of Pittsburgh, School of Medicine, Pittsburgh, PA 15232, USA.

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http://dx.doi.org/10.1309/XN25JG7K0JFJB10CDOI Listing
October 2005

Automated clinical annotation of tissue bank specimens.

Stud Health Technol Inform 2004 ;107(Pt 1):607-10

Center for Pathology Informatics, Department of Pathology, Benedum Oncology Informatics Center, University Cancer Institute, University of Pittsburgh Medical School, 5150 Centre Avenue, Pittsburgh, PA 15232, USA.

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June 2005

Implementation and evaluation of a negation tagger in a pipeline-based system for information extract from pathology reports.

Stud Health Technol Inform 2004 ;107(Pt 1):663-7

Centers for Pathology and Oncology Informatics, University of Pittsburgh, UPMC Shadyside, 5230 Centre Avenue, Pittsburgh, PA 15232, USA.

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June 2005

Perineural invasion in prostate cancer biopsies is not associated with higher rates of positive surgical margins.

Prostate 2005 Jun;63(4):336-40

Department of Urology, The University of Pittsburgh, Pittsburgh, Pennsylvania 15213-3232, USA.

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http://doi.wiley.com/10.1002/pros.20197
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http://dx.doi.org/10.1002/pros.20197DOI Listing
June 2005

Pathology and patient safety: the critical role of pathology informatics in error reduction and quality initiatives.

Clin Lab Med 2004 Dec;24(4):913-43, vi

Center for Pathology Informatics, Department of Pathology, University of Pittsburgh Medical School, 5150 Centre Avenue, UPMC Cancer Pavilion, 3rd Floor, Pittsburgh, PA 15232, USA.

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http://dx.doi.org/10.1016/j.cll.2004.05.019DOI Listing
December 2004

Tests for finding complex patterns of differential expression in cancers: towards individualized medicine.

BMC Bioinformatics 2004 Aug 12;5:110. Epub 2004 Aug 12.

Department of Pathology, Center for Biomedical Informatics, and Interdisciplinary Biomedical Graduate Program, University of Pittsburgh, PA 15232 USA.

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http://dx.doi.org/10.1186/1471-2105-5-110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC514539PMC
August 2004

The tissue microarray data exchange specification: implementation by the Cooperative Prostate Cancer Tissue Resource.

BMC Bioinformatics 2004 Feb 27;5:19. Epub 2004 Feb 27.

Cancer Diagnosis Program, National Cancer Institute, National Institutes of Health, Bethesda, USA.

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http://dx.doi.org/10.1186/1471-2105-5-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC373442PMC
February 2004

Design and analysis of a content-based pathology image retrieval system.

IEEE Trans Inf Technol Biomed 2003 Dec;7(4):249-55

Department of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA 15261, USA.

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http://dx.doi.org/10.1109/titb.2003.822952DOI Listing
December 2003

High prevalence of screening-detected prostate cancer among Afro-Caribbeans: the Tobago Prostate Cancer Survey.

Cancer Epidemiol Biomarkers Prev 2002 Aug;11(8):726-9

Department of Epidemiology, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA.

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August 2002