Michael Hammer

Michael Hammer

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Michael Hammer

Michael Hammer

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Comparison of genetic structure in co-occurring freshwater eleotrids (Actinopterygii: Philypnodon) reveals cryptic species, likely translocation and regional conservation hotspots.

Authors:
Michael P Hammer Mark Adams Christine E Thacker Jerald B Johnson Peter J Unmack

Mol Phylogenet Evol 2019 Oct 5;139:106556. Epub 2019 Jul 5.

Institute for Applied Ecology, University of Canberra, ACT 2617, Australia; Department of Biology, Brigham Young University, Provo, UT 84602, USA.

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http://dx.doi.org/10.1016/j.ympev.2019.106556DOI Listing
October 2019

Altered expression of signaling pathways regulating neuronal excitability in hippocampal tissue of temporal lobe epilepsy patients with low and high seizure frequency.

Authors:
Michael F Hammer Ryan Sprissler Robert W Bina Branden Lau Laurel Johnstone Christina M Walter David M Labiner Martin E Weinand

Epilepsy Res 2019 Sep 24;155:106145. Epub 2019 May 24.

Division of Neurosurgery, Department of Surgery, University of Arizona College of Medicine, Tucson, AZ, USA. Electronic address:

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http://dx.doi.org/10.1016/j.eplepsyres.2019.05.013DOI Listing
September 2019

Influence of age at seizure onset on the acquisition of neurodevelopmental skills in an SCN8A cohort.

Authors:
Alejandra C Encinas Ida Ki M Moore Joseph C Watkins Michael F Hammer

Epilepsia 2019 Aug 23;60(8):1711-1720. Epub 2019 Jul 23.

Graduate Interdisciplinary Program in Genetics, University of Arizona, Tucson, Arizona.

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http://dx.doi.org/10.1111/epi.16288DOI Listing
August 2019

Substructured Population Growth in the Ashkenazi Jews Inferred with Approximate Bayesian Computation.

Authors:
Ariella L Gladstein Michael F Hammer

Mol Biol Evol 2019 06;36(6):1162-1171

Arizona Research Laboratory Division of Biotechnology, University of Arizona, Tucson, AZ.

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http://dx.doi.org/10.1093/molbev/msz047DOI Listing
June 2019

The spectrum of intermediate SCN8A-related epilepsy.

Authors:
Katrine M Johannesen Elena Gardella Alejandra C Encinas Anna-Elina Lehesjoki Tarja Linnankivi Michael B Petersen Ida Charlotte Bay Lund Susanne Blichfeldt Maria J Miranda Deb K Pal Karine Lascelles Peter Procopis Alessandro Orsini Alice Bonuccelli Thea Giacomini Ingo Helbig Christina D Fenger Sanjay M Sisodiya Laura Hernandez-Hernandez Sundararaman Krithika Melissa Rumple Silvia Masnada Marialuisa Valente Cristina Cereda Lucio Giordano Patrizia Accorsi Sarah E Bürki Margherita Mancardi Christian Korff Renzo Guerrini Sarah von Spiczak Dorota Hoffman-Zacharska Tomasz Mazurczak Antonietta Coppola Salvatore Buono Marilena Vecchi Michael F Hammer Costanza Varesio Pierangelo Veggiotti Dennis Lal Tobias Brünger Federico Zara Pasquale Striano Guido Rubboli Rikke S Møller

Epilepsia 2019 May 10;60(5):830-844. Epub 2019 Apr 10.

Department of Epilepsy Genetics and Personalized Treatment, Danish Epilepsy Center Filadelfia, Dianalund, Denmark.

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http://dx.doi.org/10.1111/epi.14705DOI Listing
May 2019

New partnerships, new perspectives: The relevance of sexual and reproductive health and rights for sustainable development.

Authors:
Susannah H Mayhew Karen Newman David Johnson Emily Clark Michael Hammer Vik Mohan Sarah Ssali

Health Policy 2019 Mar 16. Epub 2019 Mar 16.

Makerere University, Uganda.

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http://dx.doi.org/10.1016/j.healthpol.2019.03.010DOI Listing
March 2019

Genomic Evidence of Local Adaptation to Climate and Diet in Indigenous Siberians.

Authors:
Brian Hallmark Tatiana M Karafet PingHsun Hsieh Ludmila P Osipova Joseph C Watkins Michael F Hammer

Mol Biol Evol 2019 02;36(2):315-327

ARL Division of Biotechnology, University of Arizona, Tucson, AZ.

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https://academic.oup.com/mbe/advance-article/doi/10.1093/mol
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http://dx.doi.org/10.1093/molbev/msy211DOI Listing
February 2019

Leukocyte expression profiles reveal gene sets with prognostic value for seizure-free outcome following stereotactic laser amygdalohippocampotomy.

Authors:
Ryan Sprissler Robert Bina Willard Kasoff Marlys H Witte Michael Bernas Christina Walter David M Labiner Branden Lau Michael F Hammer Martin E Weinand

Sci Rep 2019 Jan 31;9(1):1086. Epub 2019 Jan 31.

Division of Neurosurgery, Department of Surgery, University of Arizona College of Medicine, Tucson, AZ, 85724, USA.

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http://www.nature.com/articles/s41598-018-37763-5
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http://dx.doi.org/10.1038/s41598-018-37763-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6355811PMC
January 2019

Siberian genetic diversity reveals complex origins of the Samoyedic-speaking populations.

Authors:
Tatiana M Karafet Ludmila P Osipova Olga V Savina Brian Hallmark Michael F Hammer

Am J Hum Biol 2018 11 8;30(6):e23194. Epub 2018 Nov 8.

ARL Division of Biotechnology, University of Arizona, Tucson, Arizona.

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http://doi.wiley.com/10.1002/ajhb.23194
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http://dx.doi.org/10.1002/ajhb.23194DOI Listing
November 2018

Drug-induced aneuploidy and polyploidy is a mechanism of disease relapse in MYC/BCL2-addicted diffuse large B-cell lymphoma.

Authors:
Shariful Islam Andrew L Paek Michael Hammer Savithri Rangarajan Robert Ruijtenbeek Laurence Cooke Eric Weterings Daruka Mahadevan

Oncotarget 2018 Nov 13;9(89):35875-35890. Epub 2018 Nov 13.

Department of Medicine, University of Arizona Cancer Center, Tucson, AZ, USA.

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http://www.oncotarget.com/fulltext/26251
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http://dx.doi.org/10.18632/oncotarget.26251DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6267596PMC
November 2018

Cryptic biodiversity in the freshwater fishes of the Kimberley endemism hotspot, northwestern Australia.

Authors:
James J Shelley Stephen E Swearer Mark Adams Tim Dempster Matthew C Le Feuvre Michael P Hammer Peter J Unmack

Mol Phylogenet Evol 2018 10 25;127:843-858. Epub 2018 Jun 25.

Institute for Applied Ecology, University of Canberra, ACT 2601, Australia.

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http://dx.doi.org/10.1016/j.ympev.2018.06.032DOI Listing
October 2018

The role of phylogenetically conserved elements in shaping patterns of human genomic diversity.

Authors:
August E Woerner Krishna R Veeramah Joseph C Watkins Michael F Hammer

Mol Biol Evol 2018 Aug 3. Epub 2018 Aug 3.

ARL Division of Biotechnology, University of Arizona, Tucson, AZ USA.

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http://dx.doi.org/10.1093/molbev/msy145DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6107059PMC
August 2018

Phylogenetic analysis of trophic niche evolution reveals a latitudinal herbivory gradient in Clupeoidei (herrings, anchovies, and allies).

Authors:
Joshua P Egan Devin D Bloom Chien-Hsien Kuo Michael P Hammer Prasert Tongnunui Samuel P Iglésias Marcus Sheaves Chaiwut Grudpan Andrew M Simons

Mol Phylogenet Evol 2018 07 15;124:151-161. Epub 2018 Mar 15.

Bell Museum of Natural History, University of Minnesota, 100 Ecology, 1987 Upper Buford Circle, St. Paul, MN 55108, USA; Department of Fisheries, Wildlife and Conservation Biology, University of Minnesota, 135B Skok Hall, 2003 Upper Buford Circle, St. Paul, MN 55108, USA.

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http://dx.doi.org/10.1016/j.ympev.2018.03.011DOI Listing
July 2018

Modeling SNP array ascertainment with Approximate Bayesian Computation for demographic inference.

Authors:
Consuelo D Quinto-Cortés August E Woerner Joseph C Watkins Michael F Hammer

Sci Rep 2018 07 5;8(1):10209. Epub 2018 Jul 5.

ARL Division of Biotechnology, University of Arizona, Tucson, Arizona, 85721, USA.

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http://dx.doi.org/10.1038/s41598-018-28539-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6033855PMC
July 2018

Exceeding Hrdlička's aims: 100 Years of genetics in anthropology.

Authors:
Emőke J E Szathmáry Stephen L Zegura Michael F Hammer

Am J Phys Anthropol 2018 04;165(4):754-776

Department of Anthropology, St. Paul's College, University of Manitoba, 70 Dysart Road, Winnipeg, Manitoba, R3T 2M6, Canada.

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http://dx.doi.org/10.1002/ajpa.23406DOI Listing
April 2018

Revision of the Australian Wet Tropics endemic rainbowfish genus Cairnsichthys (Atheriniformes: Melanotaeniidae), with description of a new species.

Authors:
Michael P Hammer Gerald R Allen Keith C Martin Mark Adams Brendan C Ebner Tarmo A Raadik Peter J Unmack

Zootaxa 2018 Apr 23;4413(2):271-294. Epub 2018 Apr 23.

Museum and Art Gallery of the Northern Territory, PO Box 4646, Darwin, Northern Territory 0801..

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http://dx.doi.org/10.11646/zootaxa.4413.2.3DOI Listing
April 2018

Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly.

Authors:
Mun Hua Tan Christopher M Austin Michael P Hammer Yin Peng Lee Laurence J Croft Han Ming Gan

Gigascience 2018 03;7(3):1-6

Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong, Victoria 3220, Australia.

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http://dx.doi.org/10.1093/gigascience/gix137DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5848817PMC
March 2018

Exome Sequencing Provides Evidence of Polygenic Adaptation to a Fat-Rich Animal Diet in Indigenous Siberian Populations.

Authors:
PingHsun Hsieh Brian Hallmark Joseph Watkins Tatiana M Karafet Ludmila P Osipova Ryan N Gutenkunst Michael F Hammer

Mol Biol Evol 2017 Nov;34(11):2913-2926

Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ.

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http://dx.doi.org/10.1093/molbev/msx226DOI Listing
November 2017

Neurotransmitters and Sodium Channelopathies; Possible Link?

Authors:
Michael F Hammer Alejandra D C Encinas

Pediatr Neurol Briefs 2017 Nov;31(3)

Graduate Interdisciplinary Program in Genetics, University of Arizona, Tucson, AZ.

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http://dx.doi.org/10.15844/pedneurbriefs-31-3-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5681457PMC
November 2017

Rare variants of small effect size in neuronal excitability genes influence clinical outcome in Japanese cases of SCN1A truncation-positive Dravet syndrome.

Authors:
Michael F Hammer Atsushi Ishii Laurel Johnstone Alexander Tchourbanov Branden Lau Ryan Sprissler Brian Hallmark Miao Zhang Jin Zhou Joseph Watkins Shinichi Hirose

PLoS One 2017 7;12(7):e0180485. Epub 2017 Jul 7.

Department of Pediatrics, School of Medicine and Central Research Institute for the Molecular Pathogeneses of Epilepsy, Fukuoka University, Fukuoka, Japan.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0180485PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5501540PMC
October 2017

Complex Patterns of Admixture across the Indonesian Archipelago.

Authors:
Georgi Hudjashov Tatiana M Karafet Daniel J Lawson Sean Downey Olga Savina Herawati Sudoyo J Stephen Lansing Michael F Hammer Murray P Cox

Mol Biol Evol 2017 10;34(10):2439-2452

Statistics and Bioinformatics Group, Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.

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http://dx.doi.org/10.1093/molbev/msx196DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5850824PMC
October 2017

Modulation of Upper Esophageal Sphincter (UES) Relaxation and Opening During Volume Swallowing.

Authors:
Charles Cock Corinne A Jones Michael J Hammer Taher I Omari Timothy M McCulloch

Dysphagia 2017 04 17;32(2):216-224. Epub 2016 Aug 17.

Division of Otolaryngology, Department of Surgery, University of Wisconsin-Madison, Madison, WI, USA.

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http://dx.doi.org/10.1007/s00455-016-9744-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6442470PMC
April 2017

Expiratory muscle strength training evaluated with simultaneous high-resolution manometry and electromyography.

Authors:
Katherine A Hutcheson Michael J Hammer Sarah P Rosen Corinne A Jones Timothy M McCulloch

Laryngoscope 2017 04 13;127(4):797-804. Epub 2017 Jan 13.

Department of Surgery, Division of Otolaryngology-Head and Neck Surgery, University of Wisconsin-Madison, Madison, Wisconsin, U.S.A.

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http://dx.doi.org/10.1002/lary.26397DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5557375PMC
April 2017

Genome-wide SNPs resolve a key conflict between sequence and allozyme data to confirm another threatened candidate species of river blackfishes (Teleostei: Percichthyidae: Gadopsis).

Authors:
Peter J Unmack Jonathan Sandoval-Castillo Michael P Hammer Mark Adams Tarmo A Raadik Luciano B Beheregaray

Mol Phylogenet Evol 2017 04 22;109:415-420. Epub 2017 Feb 22.

Molecular Ecology Laboratory, School of Biological Sciences, Flinders University, Adelaide, SA 5001, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.ympev.2017.02.013DOI Listing
April 2017

Freshwater fishes of northern Australia.

Authors:
Bradley J Pusey Damien W Burrows Mark J Kennard Colton N Perna Peter J Unmack Quentin Allsop Michael P Hammer

Zootaxa 2017 Apr 11;4253(1):1-104. Epub 2017 Apr 11.

TropWATER-Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Townsville, Queensland, 4811, Australia..

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http://dx.doi.org/10.11646/zootaxa.4253.1.1DOI Listing
April 2017

Altered gene expression profile in a mouse model of SCN8A encephalopathy.

Authors:
Ryan S Sprissler Jacy L Wagnon Rosie K Bunton-Stasyshyn Miriam H Meisler Michael F Hammer

Exp Neurol 2017 Feb 9;288:134-141. Epub 2016 Nov 9.

ARL Division of Biotechnology, University of Arizona, Tucson, AZ 85721, USA; Department of Neurology, University of Arizona, Tucson, AZ 85721, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00144886163035
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http://dx.doi.org/10.1016/j.expneurol.2016.11.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5215827PMC
February 2017

Clinical implications of SCN1A missense and truncation variants in a large Japanese cohort with Dravet syndrome.

Authors:
Atsushi Ishii Joseph C Watkins Debbie Chen Shinichi Hirose Michael F Hammer

Epilepsia 2017 02 24;58(2):282-290. Epub 2016 Dec 24.

ARL Division of Biotechnology, University of Arizona, Tucson, Arizona, U.S.A.

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http://dx.doi.org/10.1111/epi.13639DOI Listing
February 2017

Effects of deep brain stimulation on vocal fold immobility in Parkinson's disease.

Authors:
Elsa V Arocho-Quinones Michael J Hammer Jonathan M Bock Peter A Pahapill

Surg Neurol Int 2017 20;8:22. Epub 2017 Feb 20.

Department of Neurosurgery, U.S. Department of Veterans Affairs Medical Center, Milwaukee, USA; Department of Neurosurgery, Medical College of Wisconsin, Milwaukee, USA.

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http://dx.doi.org/10.4103/2152-7806.200580DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5339919PMC
February 2017

The complete mitogenome of the minute mudskipper, Periophthalmus minutus Eggert, 1935 (Perciformes: Gobiidae: Oxudercinae).

Authors:
Han Ming Gan Mun Hua Tan Yin Peng Lee Michael P Hammer Christopher M Austin

Mitochondrial DNA A DNA Mapp Seq Anal 2016 11 20;27(6):4187-4188. Epub 2015 Jan 20.

a Genomics Facility , Monash University Malaysia , Selangor , Malaysia.

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http://dx.doi.org/10.3109/19401736.2014.1003905DOI Listing
November 2016

Riverscape genomics of a threatened fish across a hydroclimatically heterogeneous river basin.

Authors:
Chris J Brauer Michael P Hammer Luciano B Beheregaray

Mol Ecol 2016 10 17;25(20):5093-5113. Epub 2016 Sep 17.

Molecular Ecology Laboratory, School of Biological Sciences, Flinders University, Adelaide, SA, 5042, Australia.

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http://dx.doi.org/10.1111/mec.13830DOI Listing
October 2016

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.

Authors:
Swapan Mallick Heng Li Mark Lipson Iain Mathieson Melissa Gymrek Fernando Racimo Mengyao Zhao Niru Chennagiri Susanne Nordenfelt Arti Tandon Pontus Skoglund Iosif Lazaridis Sriram Sankararaman Qiaomei Fu Nadin Rohland Gabriel Renaud Yaniv Erlich Thomas Willems Carla Gallo Jeffrey P Spence Yun S Song Giovanni Poletti Francois Balloux George van Driem Peter de Knijff Irene Gallego Romero Aashish R Jha Doron M Behar Claudio M Bravi Cristian Capelli Tor Hervig Andres Moreno-Estrada Olga L Posukh Elena Balanovska Oleg Balanovsky Sena Karachanak-Yankova Hovhannes Sahakyan Draga Toncheva Levon Yepiskoposyan Chris Tyler-Smith Yali Xue M Syafiq Abdullah Andres Ruiz-Linares Cynthia M Beall Anna Di Rienzo Choongwon Jeong Elena B Starikovskaya Ene Metspalu Jüri Parik Richard Villems Brenna M Henn Ugur Hodoglugil Robert Mahley Antti Sajantila George Stamatoyannopoulos Joseph T S Wee Rita Khusainova Elza Khusnutdinova Sergey Litvinov George Ayodo David Comas Michael F Hammer Toomas Kivisild William Klitz Cheryl A Winkler Damian Labuda Michael Bamshad Lynn B Jorde Sarah A Tishkoff W Scott Watkins Mait Metspalu Stanislav Dryomov Rem Sukernik Lalji Singh Kumarasamy Thangaraj Svante Pääbo Janet Kelso Nick Patterson David Reich

Nature 2016 Oct 21;538(7624):201-206. Epub 2016 Sep 21.

Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1038/nature18964DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5161557PMC
October 2016

Corrigendum: Geographic population structure analysis of worldwide human populations infers their biogeographical origins.

Authors:
Eran Elhaik Tatiana Tatarinova Dmitri Chebotarev Ignazio S Piras Carla Maria Calò Antonella De Montis Manuela Atzori Monica Marini Sergio Tofanelli Paolo Francalacci Luca Pagani Chris Tyler-Smith Yali Xue Francesco Cucca Theodore G Schurr Jill B Gaieski Carlalynne Melendez Miguel G Vilar Amanda C Owings Rocío Gómez Ricardo Fujita Fabrício R Santos David Comas Oleg Balanovsky Elena Balanovska Pierre Zalloua Himla Soodyall Ramasamy Pitchappan ArunKumar GaneshPrasad Michael Hammer Lisa Matisoo-Smith R Spencer Wells

Nat Commun 2016 10 31;7:13468. Epub 2016 Oct 31.

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http://dx.doi.org/10.1038/ncomms13468DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095557PMC
October 2016

Remote-Stereocontrol in Dienamine Catalysis: Z-Dienamine Preferences and Electrophile-Catalyst Interaction Revealed by NMR and Computational Studies.

Authors:
Andreas Seegerer Johnny Hioe Michael M Hammer Fabio Morana Patrick J W Fuchs Ruth M Gschwind

J Am Chem Soc 2016 08 2;138(31):9864-73. Epub 2016 Aug 2.

Institut für Organische Chemie, Universität Regensburg , D-93053 Regensburg, Germany.

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http://pubs.acs.org/doi/10.1021/jacs.6b04008
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http://dx.doi.org/10.1021/jacs.6b04008DOI Listing
August 2016

SCN8A encephalopathy: Research progress and prospects.

Authors:
Miriam H Meisler Guy Helman Michael F Hammer Brandy E Fureman William D Gaillard Alan L Goldin Shinichi Hirose Atsushi Ishii Barbara L Kroner Christoph Lossin Heather C Mefford Jack M Parent Manoj Patel John Schreiber Randall Stewart Vicky Whittemore Karen Wilcox Jacy L Wagnon Phillip L Pearl Adeline Vanderver Ingrid E Scheffer

Epilepsia 2016 07 8;57(7):1027-35. Epub 2016 Jun 8.

Department of Neurology, Royal Children's Hospital, Melbourne, Victoria, Australia.

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http://dx.doi.org/10.1111/epi.13422DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5495462PMC
July 2016

Corrigendum: Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies.

Authors:
PingHsun Hsieh August E Woerner Jeffrey D Wall Joseph Lachance Sarah A Tishkoff Ryan N Gutenkunst Michael F Hammer

Genome Res 2016 05;26(5):717.1

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http://dx.doi.org/10.1101/gr.206524.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864460PMC
May 2016

The Time Scale of Recombination Rate Evolution in Great Apes.

Authors:
Laurie S Stevison August E Woerner Jeffrey M Kidd Joanna L Kelley Krishna R Veeramah Kimberly F McManus Carlos D Bustamante Michael F Hammer Jeffrey D Wall

Mol Biol Evol 2016 Apr 15;33(4):928-45. Epub 2015 Dec 15.

Institute for Human Genetics, University of California San Francisco Department of Epidemiology & Biostatistics, University of California San Francisco

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http://dx.doi.org/10.1093/molbev/msv331DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870646PMC
April 2016

[How to do: joint puncture].

Authors:
Michael Renelt Michael Hammer

Dtsch Med Wochenschr 2016 Apr 14;141(8):558-61. Epub 2016 Apr 14.

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http://dx.doi.org/10.1055/s-0042-102971DOI Listing
April 2016

A multisensor approach to improve manometric analysis of the upper esophageal sphincter.

Authors:
Corinne A Jones Michelle R Ciucci Michael J Hammer Timothy M McCulloch

Laryngoscope 2016 Mar 22;126(3):657-64. Epub 2015 Aug 22.

Department of Surgery, Division of Otolaryngology.

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http://dx.doi.org/10.1002/lary.25506DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4548824PMC
March 2016

Coevolution of genes and languages and high levels of population structure among the highland populations of Daghestan.

Authors:
Tatiana M Karafet Kazima B Bulayeva Johanna Nichols Oleg A Bulayev Farida Gurgenova Jamilia Omarova Levon Yepiskoposyan Olga V Savina Barry H Rodrigue Michael F Hammer

J Hum Genet 2016 Mar 26;61(3):181-91. Epub 2015 Nov 26.

ARL Division of Biotechnology, University of Arizona, Tucson, AZ, USA.

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http://escholarship.org/uc/item/5zr6g9fj.pdf
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http://dx.doi.org/10.1038/jhg.2015.132DOI Listing
March 2016

Predicting the activation states of the muscles governing upper esophageal sphincter relaxation and opening.

Authors:
Taher I Omari Corinne A Jones Michael J Hammer Charles Cock Philip Dinning Lukasz Wiklendt Marcello Costa Timothy M McCulloch

Am J Physiol Gastrointest Liver Physiol 2016 Mar 14;310(6):G359-66. Epub 2016 Jan 14.

Department of Surgery, Division of Otolaryngology, University of Wisconsin-Madison, Madison, Wisconsin.

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http://ajpgi.physiology.org/content/ajpgi/early/2016/01/08/a
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http://ajpgi.physiology.org/content/ajpgi/310/6/G359.full.pd
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http://ajpgi.physiology.org/lookup/doi/10.1152/ajpgi.00388.2
Publisher Site
http://dx.doi.org/10.1152/ajpgi.00388.2015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4796297PMC
March 2016

Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection.

Authors:
PingHsun Hsieh Krishna R Veeramah Joseph Lachance Sarah A Tishkoff Jeffrey D Wall Michael F Hammer Ryan N Gutenkunst

Genome Res 2016 Mar 17;26(3):279-90. Epub 2016 Feb 17.

Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona 85721, USA; Department of Molecular and Cellular Biology, University of Arizona, Tucson, Arizona 85721, USA.

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http://dx.doi.org/10.1101/gr.192971.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772011PMC
March 2016

Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies.

Authors:
PingHsun Hsieh August E Woerner Jeffrey D Wall Joseph Lachance Sarah A Tishkoff Ryan N Gutenkunst Michael F Hammer

Genome Res 2016 Mar 17;26(3):291-300. Epub 2016 Feb 17.

Arizona Research Laboratories Division of Biotechnology, University of Arizona, Tucson, Arizona 85721, USA;

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http://dx.doi.org/10.1101/gr.196634.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772012PMC
March 2016

A new species of Near-shore Marine Goby (Pisces: Gobiidae: Nesogobius) from Kangaroo Island, Australia.

Authors:
Michael P Hammer Douglass F Hoese Terry Bertozzi

Zootaxa 2015 Dec 11;4057(3):371-84. Epub 2015 Dec 11.

South Australian Museum, North Terrace, Adelaide, South Australia 5000, Australia School of Biological Sciences, University of Adelaide, North Terrace, Adelaide, South Australia 5005, Australia; Email: unknown.

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http://dx.doi.org/10.11646/zootaxa.4057.3.4DOI Listing
December 2015

Extensive genome-wide autozygosity in the population isolates of Daghestan.

Authors:
Tatiana M Karafet Kazima B Bulayeva Oleg A Bulayev Farida Gurgenova Jamilia Omarova Levon Yepiskoposyan Olga V Savina Krishna R Veeramah Michael F Hammer

Eur J Hum Genet 2015 Oct 21;23(10):1405-12. Epub 2015 Jan 21.

ARL Division of Biotechnology, University of Arizona, Tucson, AZ, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4592092PMC
October 2015

Characterization of MHC class IIB for four endangered Australian freshwater fishes obtained from ecologically divergent populations.

Authors:
Seraina E Bracamonte Steve Smith Michael Hammer Scott A Pavey Paul Sunnucks Luciano B Beheregaray

Fish Shellfish Immunol 2015 Oct 18;46(2):468-76. Epub 2015 Jun 18.

Molecular Ecology Lab, Flinders University, Adelaide 5001, South Australia, Australia. Electronic address:

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October 2015

Whole Genome Sequencing of the Asian Arowana (Scleropages formosus) Provides Insights into the Evolution of Ray-Finned Fishes.

Authors:
Christopher M Austin Mun Hua Tan Larry J Croft Michael P Hammer Han Ming Gan

Genome Biol Evol 2015 Oct 6;7(10):2885-95. Epub 2015 Oct 6.

School of Science, Monash University Malaysia, Petaling Jaya, Selangor, Malaysia Monash University Malaysia Genomics Facility, Monash University Malaysia, Petaling Jaya, Selangor, Malaysia

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http://dx.doi.org/10.1093/gbe/evv186DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4684697PMC
October 2015

Global diversity, population stratification, and selection of human copy-number variation.

Authors:
Peter H Sudmant Swapan Mallick Bradley J Nelson Fereydoun Hormozdiari Niklas Krumm John Huddleston Bradley P Coe Carl Baker Susanne Nordenfelt Michael Bamshad Lynn B Jorde Olga L Posukh Hovhannes Sahakyan W Scott Watkins Levon Yepiskoposyan M Syafiq Abdullah Claudio M Bravi Cristian Capelli Tor Hervig Joseph T S Wee Chris Tyler-Smith George van Driem Irene Gallego Romero Aashish R Jha Sena Karachanak-Yankova Draga Toncheva David Comas Brenna Henn Toomas Kivisild Andres Ruiz-Linares Antti Sajantila Ene Metspalu Jüri Parik Richard Villems Elena B Starikovskaya George Ayodo Cynthia M Beall Anna Di Rienzo Michael F Hammer Rita Khusainova Elza Khusnutdinova William Klitz Cheryl Winkler Damian Labuda Mait Metspalu Sarah A Tishkoff Stanislav Dryomov Rem Sukernik Nick Patterson David Reich Evan E Eichler

Science 2015 09 6;349(6253):aab3761. Epub 2015 Aug 6.

Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA. Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA.

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http://dx.doi.org/10.1126/science.aab3761DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4568308PMC
September 2015

An annotated checklist of the fishes of the Northern Territory, Australia.

Authors:
Helen K Larson Rex S Williams Michael P Hammer

Zootaxa 2013 ;3696:1-293

and Art Gallery of the Northern Territory, Darwin, Australia.

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July 2015

Reconstructing Past Admixture Processes from Local Genomic Ancestry Using Wavelet Transformation.

Authors:
Jean Sanderson Herawati Sudoyo Tatiana M Karafet Michael F Hammer Murray P Cox

Genetics 2015 Jun 7;200(2):469-81. Epub 2015 Apr 7.

Statistics and Bioinformatics Group, Institute of Fundamental Sciences, Massey University, Palmerston North 4442, New Zealand

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http://dx.doi.org/10.1534/genetics.115.176842DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4492373PMC
June 2015

Reply to 'The 'extremely ancient' chromosome that isn't' by Elhaik et al.

Authors:
Fernando L Mendez Krishna R Veeramah Mark G Thomas Tatiana M Karafet Michael F Hammer

Eur J Hum Genet 2015 May 15;23(5):564-7. Epub 2014 Oct 15.

ARL Division of Biotechnology, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/ejhg.2014.148DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4402626PMC
May 2015

Examining phylogenetic relationships among gibbon genera using whole genome sequence data using an approximate bayesian computation approach.

Authors:
Krishna R Veeramah August E Woerner Laurel Johnstone Ivo Gut Marta Gut Tomas Marques-Bonet Lucia Carbone Jeff D Wall Michael F Hammer

Genetics 2015 May 12;200(1):295-308. Epub 2015 Mar 12.

Arizona Research Laboratories Division of Biotechnology, University of Arizona, Tucson, Arizona 85721

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http://dx.doi.org/10.1534/genetics.115.174425DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4423371PMC
May 2015

Extreme selective sweeps independently targeted the X chromosomes of the great apes.

Authors:
Kiwoong Nam Kasper Munch Asger Hobolth Julien Yann Dutheil Krishna R Veeramah August E Woerner Michael F Hammer Thomas Mailund Mikkel Heide Schierup

Proc Natl Acad Sci U S A 2015 May 4;112(20):6413-8. Epub 2015 May 4.

Bioinformatics Research Centre and Department of Bioscience, Aarhus University, Aarhus 8000, Denmark;

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http://dx.doi.org/10.1073/pnas.1419306112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4443357PMC
May 2015

A recent bottleneck of Y chromosome diversity coincides with a global change in culture.

Authors:
Monika Karmin Lauri Saag Mário Vicente Melissa A Wilson Sayres Mari Järve Ulvi Gerst Talas Siiri Rootsi Anne-Mai Ilumäe Reedik Mägi Mario Mitt Luca Pagani Tarmo Puurand Zuzana Faltyskova Florian Clemente Alexia Cardona Ene Metspalu Hovhannes Sahakyan Bayazit Yunusbayev Georgi Hudjashov Michael DeGiorgio Eva-Liis Loogväli Christina Eichstaedt Mikk Eelmets Gyaneshwer Chaubey Kristiina Tambets Sergei Litvinov Maru Mormina Yali Xue Qasim Ayub Grigor Zoraqi Thorfinn Sand Korneliussen Farida Akhatova Joseph Lachance Sarah Tishkoff Kuvat Momynaliev François-Xavier Ricaut Pradiptajati Kusuma Harilanto Razafindrazaka Denis Pierron Murray P Cox Gazi Nurun Nahar Sultana Rane Willerslev Craig Muller Michael Westaway David Lambert Vedrana Skaro Lejla Kovačevic Shahlo Turdikulova Dilbar Dalimova Rita Khusainova Natalya Trofimova Vita Akhmetova Irina Khidiyatova Daria V Lichman Jainagul Isakova Elvira Pocheshkhova Zhaxylyk Sabitov Nikolay A Barashkov Pagbajabyn Nymadawa Evelin Mihailov Joseph Wee Tien Seng Irina Evseeva Andrea Bamberg Migliano Syafiq Abdullah George Andriadze Dragan Primorac Lubov Atramentova Olga Utevska Levon Yepiskoposyan Damir Marjanovic Alena Kushniarevich Doron M Behar Christian Gilissen Lisenka Vissers Joris A Veltman Elena Balanovska Miroslava Derenko Boris Malyarchuk Andres Metspalu Sardana Fedorova Anders Eriksson Andrea Manica Fernando L Mendez Tatiana M Karafet Krishna R Veeramah Neil Bradman Michael F Hammer Ludmila P Osipova Oleg Balanovsky Elza K Khusnutdinova Knut Johnsen Maido Remm Mark G Thomas Chris Tyler-Smith Peter A Underhill Eske Willerslev Rasmus Nielsen Mait Metspalu Richard Villems Toomas Kivisild

Genome Res 2015 Apr 13;25(4):459-66. Epub 2015 Mar 13.

Estonian Biocentre, Tartu, 51010, Estonia; Division of Biological Anthropology, University of Cambridge, Cambridge, CB2 1QH, United Kingdom;

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April 2015

Catchment-scale conservation units identified for the threatened Yarra pygmy perch (Nannoperca obscura) in highly modified river systems.

Authors:
Chris J Brauer Peter J Unmack Michael P Hammer Mark Adams Luciano B Beheregaray

PLoS One 2013 13;8(12):e82953. Epub 2013 Dec 13.

Molecular Ecology Laboratory, School of Biological Sciences, Flinders University, Adelaide, South Australia, Australia.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3862729PMC
March 2015

Improved phylogenetic resolution and rapid diversification of Y-chromosome haplogroup K-M526 in Southeast Asia.

Authors:
Tatiana M Karafet Fernando L Mendez Herawati Sudoyo J Stephen Lansing Michael F Hammer

Eur J Hum Genet 2015 Mar 4;23(3):369-73. Epub 2014 Jun 4.

1] ARL Division of Biotechnology, University of Arizona, Tucson, AZ, USA [2] School of Anthropology, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/ejhg.2014.106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326703PMC
March 2015

Inference of gorilla demographic and selective history from whole-genome sequence data.

Authors:
Kimberly F McManus Joanna L Kelley Shiya Song Krishna R Veeramah August E Woerner Laurie S Stevison Oliver A Ryder Great Ape Genome Project Jeffrey M Kidd Jeffrey D Wall Carlos D Bustamante Michael F Hammer

Mol Biol Evol 2015 Mar 21;32(3):600-12. Epub 2014 Dec 21.

ARL Division of Biotechnology, University of Arizona

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http://dx.doi.org/10.1093/molbev/msu394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4327160PMC
March 2015

Convulsive seizures and SUDEP in a mouse model of SCN8A epileptic encephalopathy.

Authors:
Jacy L Wagnon Matthew J Korn Rachel Parent Taylor A Tarpey Julie M Jones Michael F Hammer Geoffrey G Murphy Jack M Parent Miriam H Meisler

Hum Mol Genet 2015 Jan 16;24(2):506-15. Epub 2014 Sep 16.

Department of Human Genetics Department of Neurology

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4275076PMC
January 2015

Characterization of a de novo SCN8A mutation in a patient with epileptic encephalopathy.

Authors:
Carolien G F de Kovel Miriam H Meisler Eva H Brilstra Frederique M C van Berkestijn Ruben van 't Slot Stef van Lieshout Isaac J Nijman Janelle E O'Brien Michael F Hammer Mark Estacion Stephen G Waxman Sulayman D Dib-Hajj Bobby P C Koeleman

Epilepsy Res 2014 Nov 4;108(9):1511-8. Epub 2014 Sep 4.

Department of Medical Genetics, University Medical Center Utrecht, Utrecht, The Netherlands.

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http://dx.doi.org/10.1016/j.eplepsyres.2014.08.020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4490185PMC
November 2014

Evaluating the tongue-hold maneuver using high-resolution manometry and electromyography.

Authors:
Michael J Hammer Corinne A Jones Corrine A Jones Jason D Mielens Chloe H Kim Timothy M McCulloch

Dysphagia 2014 Oct 27;29(5):564-70. Epub 2014 Jun 27.

Division of Otolaryngology, Department of Surgery, Room K4/769 Clinical Sciences Center, University of Wisconsin, 600 Highland Avenue, Madison, WI, 53792, USA,

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http://dx.doi.org/10.1007/s00455-014-9545-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4179981PMC
October 2014

Evidence for increased levels of positive and negative selection on the X chromosome versus autosomes in humans.

Authors:
Krishna R Veeramah Ryan N Gutenkunst August E Woerner Joseph C Watkins Michael F Hammer

Mol Biol Evol 2014 Sep 15;31(9):2267-82. Epub 2014 May 15.

Arizona Research Laboratories Division of Biotechnology, University of Arizona

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http://dx.doi.org/10.1093/molbev/msu166DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4137703PMC
September 2014

A novel de novo mutation of SCN8A (Nav1.6) with enhanced channel activation in a child with epileptic encephalopathy.

Authors:
Mark Estacion Janelle E O'Brien Allison Conravey Michael F Hammer Stephen G Waxman Sulayman D Dib-Hajj Miriam H Meisler

Neurobiol Dis 2014 Sep 27;69:117-23. Epub 2014 May 27.

Department of Human Genetics, University of Michigan, Ann Arbor, MI 48109-5618, USA. Electronic address:

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http://dx.doi.org/10.1016/j.nbd.2014.05.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4124819PMC
September 2014

Isolation, contact and social behavior shaped genetic diversity in West Timor.

Authors:
Meryanne K Tumonggor Tatiana M Karafet Sean Downey J Stephen Lansing Peter Norquest Herawati Sudoyo Michael F Hammer Murray P Cox

J Hum Genet 2014 Sep 31;59(9):494-503. Epub 2014 Jul 31.

Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.

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http://dx.doi.org/10.1038/jhg.2014.62DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4521296PMC
September 2014

Gibbon genome and the fast karyotype evolution of small apes.

Authors:
Lucia Carbone R Alan Harris Sante Gnerre Krishna R Veeramah Belen Lorente-Galdos John Huddleston Thomas J Meyer Javier Herrero Christian Roos Bronwen Aken Fabio Anaclerio Nicoletta Archidiacono Carl Baker Daniel Barrell Mark A Batzer Kathryn Beal Antoine Blancher Craig L Bohrson Markus Brameier Michael S Campbell Oronzo Capozzi Claudio Casola Giorgia Chiatante Andrew Cree Annette Damert Pieter J de Jong Laura Dumas Marcos Fernandez-Callejo Paul Flicek Nina V Fuchs Ivo Gut Marta Gut Matthew W Hahn Jessica Hernandez-Rodriguez LaDeana W Hillier Robert Hubley Bianca Ianc Zsuzsanna Izsvák Nina G Jablonski Laurel M Johnstone Anis Karimpour-Fard Miriam K Konkel Dennis Kostka Nathan H Lazar Sandra L Lee Lora R Lewis Yue Liu Devin P Locke Swapan Mallick Fernando L Mendez Matthieu Muffato Lynne V Nazareth Kimberly A Nevonen Majesta O'Bleness Cornelia Ochis Duncan T Odom Katherine S Pollard Javier Quilez David Reich Mariano Rocchi Gerald G Schumann Stephen Searle James M Sikela Gabriella Skollar Arian Smit Kemal Sonmez Boudewijn ten Hallers Elizabeth Terhune Gregg W C Thomas Brygg Ullmer Mario Ventura Jerilyn A Walker Jeffrey D Wall Lutz Walter Michelle C Ward Sarah J Wheelan Christopher W Whelan Simon White Larry J Wilhelm August E Woerner Mark Yandell Baoli Zhu Michael F Hammer Tomas Marques-Bonet Evan E Eichler Lucinda Fulton Catrina Fronick Donna M Muzny Wesley C Warren Kim C Worley Jeffrey Rogers Richard K Wilson Richard A Gibbs

Nature 2014 Sep;513(7517):195-201

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.

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http://dx.doi.org/10.1038/nature13679DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4249732PMC
September 2014

Ancient human genomes suggest three ancestral populations for present-day Europeans.

Authors:
Iosif Lazaridis Nick Patterson Alissa Mittnik Gabriel Renaud Swapan Mallick Karola Kirsanow Peter H Sudmant Joshua G Schraiber Sergi Castellano Mark Lipson Bonnie Berger Christos Economou Ruth Bollongino Qiaomei Fu Kirsten I Bos Susanne Nordenfelt Heng Li Cesare de Filippo Kay Prüfer Susanna Sawyer Cosimo Posth Wolfgang Haak Fredrik Hallgren Elin Fornander Nadin Rohland Dominique Delsate Michael Francken Jean-Michel Guinet Joachim Wahl George Ayodo Hamza A Babiker Graciela Bailliet Elena Balanovska Oleg Balanovsky Ramiro Barrantes Gabriel Bedoya Haim Ben-Ami Judit Bene Fouad Berrada Claudio M Bravi Francesca Brisighelli George B J Busby Francesco Cali Mikhail Churnosov David E C Cole Daniel Corach Larissa Damba George van Driem Stanislav Dryomov Jean-Michel Dugoujon Sardana A Fedorova Irene Gallego Romero Marina Gubina Michael Hammer Brenna M Henn Tor Hervig Ugur Hodoglugil Aashish R Jha Sena Karachanak-Yankova Rita Khusainova Elza Khusnutdinova Rick Kittles Toomas Kivisild William Klitz Vaidutis Kučinskas Alena Kushniarevich Leila Laredj Sergey Litvinov Theologos Loukidis Robert W Mahley Béla Melegh Ene Metspalu Julio Molina Joanna Mountain Klemetti Näkkäläjärvi Desislava Nesheva Thomas Nyambo Ludmila Osipova Jüri Parik Fedor Platonov Olga Posukh Valentino Romano Francisco Rothhammer Igor Rudan Ruslan Ruizbakiev Hovhannes Sahakyan Antti Sajantila Antonio Salas Elena B Starikovskaya Ayele Tarekegn Draga Toncheva Shahlo Turdikulova Ingrida Uktveryte Olga Utevska René Vasquez Mercedes Villena Mikhail Voevoda Cheryl A Winkler Levon Yepiskoposyan Pierre Zalloua Tatijana Zemunik Alan Cooper Cristian Capelli Mark G Thomas Andres Ruiz-Linares Sarah A Tishkoff Lalji Singh Kumarasamy Thangaraj Richard Villems David Comas Rem Sukernik Mait Metspalu Matthias Meyer Evan E Eichler Joachim Burger Montgomery Slatkin Svante Pääbo Janet Kelso David Reich Johannes Krause

Nature 2014 Sep;513(7518):409-13

1] Institute for Archaeological Sciences, University of Tübingen, Tübingen 72074, Germany. [2] Senckenberg Centre for Human Evolution and Palaeoenvironment, University of Tübingen, 72070 Tübingen, Germany. [3] Max Planck Institut für Geschichte und Naturwissenschaften, Jena 07745, Germany.

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September 2014

Airway somatosensory deficits and dysphagia in Parkinson's disease.

Authors:
Michael J Hammer Caitlin A Murphy Trisha M Abrams

J Parkinsons Dis 2013 ;3(1):39-44

Division of Otolaryngology, Department of Surgery, University of Wisconsin, Madison, WI 53792, USA.

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http://dx.doi.org/10.3233/JPD-120161DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3613252PMC
June 2014

Aerodynamic assessment of phonatory onset in Parkinson's disease: evidence of decreased scaling of laryngeal and respiratory control.

Authors:
Michael J Hammer

J Parkinsons Dis 2013 ;3(2):173-9

Department of Surgery, Division of Otolaryngology, University of Wisconsin, Madison, WI 53792, USA.

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http://dx.doi.org/10.3233/JPD-130180DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3673725PMC
June 2014

Are we ready to build health systems that consider the climate?

Authors:
Susannah Mayhew Sara Van Belle Michael Hammer

J Health Serv Res Policy 2014 Apr 23;19(2):124-7. Epub 2013 Dec 23.

Senior Lecturer, Global Health Department, London School of Hygiene & Tropical Medicine, London, UK.

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http://journals.sagepub.com/doi/10.1177/1355819613516943
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April 2014

Geographic population structure analysis of worldwide human populations infers their biogeographical origins.

Authors:
Eran Elhaik Tatiana Tatarinova Dmitri Chebotarev Ignazio S Piras Carla Maria Calò Antonella De Montis Manuela Atzori Monica Marini Sergio Tofanelli Paolo Francalacci Luca Pagani Chris Tyler-Smith Yali Xue Francesco Cucca Theodore G Schurr Jill B Gaieski Carlalynne Melendez Miguel G Vilar Amanda C Owings Rocío Gómez Ricardo Fujita Fabrício R Santos David Comas Oleg Balanovsky Elena Balanovska Pierre Zalloua Himla Soodyall Ramasamy Pitchappan Arunkumar Ganeshprasad Michael Hammer Lisa Matisoo-Smith R Spencer Wells

Nat Commun 2014 Apr 29;5:3513. Epub 2014 Apr 29.

National Geographic Society, Washington, District of Columbia 20036, USA.

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http://dx.doi.org/10.1038/ncomms4513DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4007635PMC
April 2014

The impact of whole-genome sequencing on the reconstruction of human population history.

Authors:
Krishna R Veeramah Michael F Hammer

Nat Rev Genet 2014 Mar 4;15(3):149-62. Epub 2014 Feb 4.

Arizona Research Laboratories Division of Biotechnology, Room 231, Life Sciences South, 1007 East Lowell Street, University of Arizona, Tucson, Arizona 85721, USA.

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http://dx.doi.org/10.1038/nrg3625DOI Listing
March 2014

Quantifying contributions of the cricopharyngeus to upper esophageal sphincter pressure changes by means of intramuscular electromyography and high-resolution manometry.

Authors:
Corinne A Jones Michael J Hammer Matthew R Hoffman Timothy M McCulloch

Ann Otol Rhinol Laryngol 2014 Mar;123(3):174-82

Department of Surgery, Division of Otolaryngology-Head and Neck Surgery, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, USA.

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http://dx.doi.org/10.1177/0003489414522975DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4128397PMC
March 2014

The KCNJ8-S422L variant previously associated with J-wave syndromes is found at an increased frequency in Ashkenazi Jews.

Authors:
Krishna R Veeramah Tatiana M Karafet Daniel Wolf Ricardo A Samson Michael F Hammer

Eur J Hum Genet 2014 Jan 1;22(1):94-8. Epub 2013 May 1.

Division of Biotechnology, Arizona Research Laboratories, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/ejhg.2013.78DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865407PMC
January 2014

Voice-related modulation of mechanosensory detection thresholds in the human larynx.

Authors:
Michael J Hammer Mallory A Krueger

Exp Brain Res 2014 Jan 12;232(1):13-20. Epub 2013 Nov 12.

Division of Otolaryngology, Department of Surgery, Room K4/769 Clinical Sciences Center, University of Wisconsin, 600 Highland Avenue, Madison, WI, 53792, USA,

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http://dx.doi.org/10.1007/s00221-013-3703-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3979554PMC
January 2014

No evidence from genome-wide data of a Khazar origin for the Ashkenazi Jews.

Authors:
Doron M Behar Mait Metspalu Yael Baran Naama M Kopelman Bayazit Yunusbayev Ariella Gladstein Shay Tzur Hovhannes Sahakyan Ardeshir Bahmanimehr Levon Yepiskoposyan Kristina Tambets Elza K Khusnutdinova Alena Kushniarevich Oleg Balanovsky Elena Balanovsky Lejla Kovacevic Damir Marjanovic Evelin Mihailov Anastasia Kouvatsi Costas Triantaphyllidis Roy J King Ornella Semino Antonio Torroni Michael F Hammer Ene Metspalu Karl Skorecki Saharon Rosset Eran Halperin Richard Villems Noah A Rosenberg

Hum Biol 2013 Dec;85(6):859-900

Department of Biology, Stanford University, Stanford, CA.

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http://dx.doi.org/10.3378/027.085.0604DOI Listing
December 2013

Multistate structural modeling and voltage-clamp analysis of epilepsy/autism mutation Kv10.2-R327H demonstrate the role of this residue in stabilizing the channel closed state.

Authors:
Yang Yang Dmytro V Vasylyev Fadia Dib-Hajj Krishna R Veeramah Michael F Hammer Sulayman D Dib-Hajj Stephen G Waxman

J Neurosci 2013 Oct;33(42):16586-93

Department of Neurology and Center for Neuroscience and Regeneration Research, Yale University School of Medicine, New Haven, Connecticut 06510, Rehabilitation Research Center, Veterans Affairs Connecticut Healthcare System, West Haven, Connecticut 06516, and Arizona Research Laboratories Division of Biotechnology, University of Arizona, Tucson, Arizona 85721.

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http://dx.doi.org/10.1523/JNEUROSCI.2307-13.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6618534PMC
October 2013

Structures and interligand interaction pattern of phosphoramidite Pd complexes by NMR spectroscopy: modulations in extended interaction surfaces as stereoselection mode of a privileged class of ligands.

Authors:
Evelyn Hartmann Michael M Hammer Ruth M Gschwind

Chemistry 2013 Aug 21;19(32):10551-62. Epub 2013 Jun 21.

Institut für Organische Chemie, Universität Regensburg, Universitätsstr. 31, 93040 Regensburg, Germany.

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http://dx.doi.org/10.1002/chem.201300095DOI Listing
August 2013

Exome sequencing reveals new causal mutations in children with epileptic encephalopathies.

Authors:
Krishna R Veeramah Laurel Johnstone Tatiana M Karafet Daniel Wolf Ryan Sprissler John Salogiannis Asa Barth-Maron Michael E Greenberg Till Stuhlmann Stefanie Weinert Thomas J Jentsch Marjorie Pazzi Linda L Restifo Dinesh Talwar Robert P Erickson Michael F Hammer

Epilepsia 2013 Jul 3;54(7):1270-81. Epub 2013 May 3.

ARL Division of Biotechnology, University of Arizona, Tucson, Arizona 85721, USA.

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http://dx.doi.org/10.1111/epi.12201DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3700577PMC
July 2013

Permanent genetic resources added to Molecular Ecology Resources Database 1 February 2013-31 March 2013.

Authors:
M C Arias Christiane Atteke S C Augusto J Bailey Pilar Bazaga Luciano B Beheregaray Laure Benoit Rumsaïs Blatrix Céline Born R M Brito Hai-kui Chen Sara Covarrubias Clara de Vega Champlain Djiéto-Lordon Marie-Pierre Dubois F O Francisco Cristina García P H P Gonçalves Clementina González Carla Gutiérrez-Rodríguez Michael P Hammer Carlos M Herrera H Itoh S Kamimura H Karaoglu S Kojima Shou-Li Li Hannah J Ling Pável F Matos-Maraví Doyle McKey Judicaël Mezui-M'Eko Juan Francisco Ornelas R F Park María I Pozo Satu Ramula Cristina Rigueiro Jonathan Sandoval-Castillo L R Santiago Miyuki M Seino Chang-Bing Song H Takeshima Anti Vasemägi C R Wellings Ji Yan Du Yu-Zhou Chang-Rong Zhang Tian-Yun Zhang

Mol Ecol Resour 2013 Jul 20;13(4):760-2. Epub 2013 May 20.

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, São Paulo, SP, Brazil.

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http://dx.doi.org/10.1111/1755-0998.12121DOI Listing
July 2013

Great ape genetic diversity and population history.

Authors:
Javier Prado-Martinez Peter H Sudmant Jeffrey M Kidd Heng Li Joanna L Kelley Belen Lorente-Galdos Krishna R Veeramah August E Woerner Timothy D O'Connor Gabriel Santpere Alexander Cagan Christoph Theunert Ferran Casals Hafid Laayouni Kasper Munch Asger Hobolth Anders E Halager Maika Malig Jessica Hernandez-Rodriguez Irene Hernando-Herraez Kay Prüfer Marc Pybus Laurel Johnstone Michael Lachmann Can Alkan Dorina Twigg Natalia Petit Carl Baker Fereydoun Hormozdiari Marcos Fernandez-Callejo Marc Dabad Michael L Wilson Laurie Stevison Cristina Camprubí Tiago Carvalho Aurora Ruiz-Herrera Laura Vives Marta Mele Teresa Abello Ivanela Kondova Ronald E Bontrop Anne Pusey Felix Lankester John A Kiyang Richard A Bergl Elizabeth Lonsdorf Simon Myers Mario Ventura Pascal Gagneux David Comas Hans Siegismund Julie Blanc Lidia Agueda-Calpena Marta Gut Lucinda Fulton Sarah A Tishkoff James C Mullikin Richard K Wilson Ivo G Gut Mary Katherine Gonder Oliver A Ryder Beatrice H Hahn Arcadi Navarro Joshua M Akey Jaume Bertranpetit David Reich Thomas Mailund Mikkel H Schierup Christina Hvilsom Aida M Andrés Jeffrey D Wall Carlos D Bustamante Michael F Hammer Evan E Eichler Tomas Marques-Bonet

Nature 2013 Jul 3;499(7459):471-5. Epub 2013 Jul 3.

Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, PRBB, Doctor Aiguader 88, Barcelona, Catalonia 08003, Spain.

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http://dx.doi.org/10.1038/nature12228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822165PMC
July 2013

End-of-life care in Canada.

Authors:
Robert Fowler Michael Hammer

Clin Invest Med 2013 Jun 1;36(3):E127-32. Epub 2013 Jun 1.

Departments of Medicine and Critical Care Medicine, Sunnybrook Hospital, Toronto, Ontario, Canada M4N 3M5.

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http://dx.doi.org/10.25011/cim.v36i3.19723DOI Listing
June 2013

Higher levels of neanderthal ancestry in East Asians than in Europeans.

Authors:
Jeffrey D Wall Melinda A Yang Flora Jay Sung K Kim Eric Y Durand Laurie S Stevison Christopher Gignoux August Woerner Michael F Hammer Montgomery Slatkin

Genetics 2013 May 14;194(1):199-209. Epub 2013 Feb 14.

Institute for Human Genetics, University of California, San Francisco, California 94143, USA.

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http://dx.doi.org/10.1534/genetics.112.148213DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3632468PMC
May 2013

Human hybrids.

Authors:
Michael F Hammer

Sci Am 2013 May;308(5):66-71

University of Arizona, USA.

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http://dx.doi.org/10.1038/scientificamerican0513-66DOI Listing
May 2013

Neandertal origin of genetic variation at the cluster of OAS immunity genes.

Authors:
Fernando L Mendez Joseph C Watkins Michael F Hammer

Mol Biol Evol 2013 Apr 12;30(4):798-801. Epub 2013 Jan 12.

Department of Ecology and Evolutionary Biology, University of Arizona, Arizona, USA.

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http://dx.doi.org/10.1093/molbev/mst004DOI Listing
April 2013

Videofluorographic assessment of deglutitive behaviors in a rat model of aging and Parkinson disease.

Authors:
John A Russell Michelle R Ciucci Michael J Hammer Nadine P Connor

Dysphagia 2013 Mar 5;28(1):95-104. Epub 2012 Jul 5.

Otolaryngology Head and Neck Surgery, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.

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http://dx.doi.org/10.1007/s00455-012-9417-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3554861PMC
March 2013

The Indonesian archipelago: an ancient genetic highway linking Asia and the Pacific.

Authors:
Meryanne K Tumonggor Tatiana M Karafet Brian Hallmark J Stephen Lansing Herawati Sudoyo Michael F Hammer Murray P Cox

J Hum Genet 2013 Mar 24;58(3):165-73. Epub 2013 Jan 24.

Department of Anthropology, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/jhg.2012.154DOI Listing
March 2013

The role of continental shelf width in determining freshwater phylogeographic patterns in south-eastern Australian pygmy perches (Teleostei: Percichthyidae).

Authors:
Peter J Unmack Michael P Hammer Mark Adams Jerald B Johnson Thomas E Dowling

Mol Ecol 2013 Mar 11;22(6):1683-99. Epub 2013 Feb 11.

School of Life Sciences, Arizona State University, PO Box 874501, Tempe, AZ, 85287-4501, USA.

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http://dx.doi.org/10.1111/mec.12204DOI Listing
March 2013

An African American paternal lineage adds an extremely ancient root to the human Y chromosome phylogenetic tree.

Authors:
Fernando L Mendez Thomas Krahn Bonnie Schrack Astrid-Maria Krahn Krishna R Veeramah August E Woerner Forka Leypey Mathew Fomine Neil Bradman Mark G Thomas Tatiana M Karafet Michael F Hammer

Am J Hum Genet 2013 Mar 28;92(3):454-9. Epub 2013 Feb 28.

Division of Biotechnology, Arizona Research Laboratories, University of Arizona, Tucson, AZ 85721, USA.

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http://dx.doi.org/10.1016/j.ajhg.2013.02.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3591855PMC
March 2013

Molecular phylogeny and phylogeography of the Australian freshwater fish genus Galaxiella, with an emphasis on dwarf galaxias (G. pusilla).

Authors:
Peter J Unmack Justin C Bagley Mark Adams Michael P Hammer Jerald B Johnson

PLoS One 2012 5;7(6):e38433. Epub 2012 Jun 5.

National Evolutionary Synthesis Center, Durham, North Carolina, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0038433PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3367931PMC
October 2012

A high-coverage genome sequence from an archaic Denisovan individual.

Authors:
Matthias Meyer Martin Kircher Marie-Theres Gansauge Heng Li Fernando Racimo Swapan Mallick Joshua G Schraiber Flora Jay Kay Prüfer Cesare de Filippo Peter H Sudmant Can Alkan Qiaomei Fu Ron Do Nadin Rohland Arti Tandon Michael Siebauer Richard E Green Katarzyna Bryc Adrian W Briggs Udo Stenzel Jesse Dabney Jay Shendure Jacob Kitzman Michael F Hammer Michael V Shunkov Anatoli P Derevianko Nick Patterson Aida M Andrés Evan E Eichler Montgomery Slatkin David Reich Janet Kelso Svante Pääbo

Science 2012 Oct 30;338(6104):222-6. Epub 2012 Aug 30.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, D-04103 Leipzig, Germany.

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http://dx.doi.org/10.1126/science.1224344DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3617501PMC
October 2012

A haplotype at STAT2 Introgressed from neanderthals and serves as a candidate of positive selection in Papua New Guinea.

Authors:
Fernando L Mendez Joseph C Watkins Michael F Hammer

Am J Hum Genet 2012 Aug;91(2):265-74

Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S000292971200324
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http://dx.doi.org/10.1016/j.ajhg.2012.06.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3415544PMC
August 2012

Global genetic variation at OAS1 provides evidence of archaic admixture in Melanesian populations.

Authors:
Fernando L Mendez Joseph C Watkins Michael F Hammer

Mol Biol Evol 2012 Jun 16;29(6):1513-20. Epub 2012 Jan 16.

Department of Ecology and Evolutionary Biology, University of Arizona, USA.

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http://dx.doi.org/10.1093/molbev/msr301DOI Listing
June 2012

Religion as a means to assure paternity.

Authors:
Beverly I Strassmann Nikhil T Kurapati Brendan F Hug Erin E Burke Brenda W Gillespie Tatiana M Karafet Michael F Hammer

Proc Natl Acad Sci U S A 2012 Jun 4;109(25):9781-5. Epub 2012 Jun 4.

Department of Anthropology and Research Center for Group Dynamics, Institute for Social Research, University of Michigan, Ann Arbor, MI 48109, USA.

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http://dx.doi.org/10.1073/pnas.1110442109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3382471PMC
June 2012

De novo pathogenic SCN8A mutation identified by whole-genome sequencing of a family quartet affected by infantile epileptic encephalopathy and SUDEP.

Authors:
Krishna R Veeramah Janelle E O'Brien Miriam H Meisler Xiaoyang Cheng Sulayman D Dib-Hajj Stephen G Waxman Dinesh Talwar Santhosh Girirajan Evan E Eichler Linda L Restifo Robert P Erickson Michael F Hammer

Am J Hum Genet 2012 Mar 23;90(3):502-10. Epub 2012 Feb 23.

Arizona Research Laboratories, Division of Biotechnology, University of Arizona, Tucson, 85721, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S000292971200038
Publisher Site
http://dx.doi.org/10.1016/j.ajhg.2012.01.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3309181PMC
March 2012

An early divergence of KhoeSan ancestors from those of other modern humans is supported by an ABC-based analysis of autosomal resequencing data.

Authors:
Krishna R Veeramah Daniel Wegmann August Woerner Fernando L Mendez Joseph C Watkins Giovanni Destro-Bisol Himla Soodyall Leslie Louie Michael F Hammer

Mol Biol Evol 2012 Feb 1;29(2):617-30. Epub 2011 Sep 1.

Arizona Research Laboratories Division of Biotechnology, University of Arizona, Arizona, USA.

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https://academic.oup.com/mbe/article-lookup/doi/10.1093/molb
Publisher Site
http://dx.doi.org/10.1093/molbev/msr212DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3258037PMC
February 2012

A phylogenetic analysis of pygmy perches (Teleostei: Percichthyidae) with an assessment of the major historical influences on aquatic biogeography in southern Australia.

Authors:
Peter J Unmack Michael P Hammer Mark Adams Thomas E Dowling

Syst Biol 2011 Dec 5;60(6):797-812. Epub 2011 May 5.

School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA.

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http://dx.doi.org/10.1093/sysbio/syr042DOI Listing
December 2011

Genetic evidence for archaic admixture in Africa.

Authors:
Michael F Hammer August E Woerner Fernando L Mendez Joseph C Watkins Jeffrey D Wall

Proc Natl Acad Sci U S A 2011 Sep 6;108(37):15123-8. Epub 2011 Sep 6.

Arizona Research Laboratories, Division of Biotechnology, Department of Ecology and Evolutionary Biology, and Mathematics Department, University of Arizona, Tucson, AZ 85721, USA.

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http://dx.doi.org/10.1073/pnas.1109300108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3174671PMC
September 2011

Subthalamic nucleus deep brain stimulation changes velopharyngeal control in Parkinson's disease.

Authors:
Michael J Hammer Steven M Barlow Kelly E Lyons Rajesh Pahwa

J Commun Disord 2011 Jan-Feb;44(1):37-48. Epub 2010 Jul 14.

Department of Surgery, Division of Otolaryngology, University of Wisconsin, Madison, WI, USA.

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http://dx.doi.org/10.1016/j.jcomdis.2010.07.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3010465PMC
April 2011

Increased resolution of Y chromosome haplogroup T defines relationships among populations of the Near East, Europe, and Africa.

Authors:
Fernando L Mendez Tatiana M Karafet Thomas Krahn Harry Ostrer Himla Soodyall Michael F Hammer

Hum Biol 2011 Feb;83(1):39-53

ARL Division of Biotechnology, University of Arizona, Tucson, AZ 85721, USA.

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http://www.bioone.org/doi/abs/10.3378/027.083.0103
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http://dx.doi.org/10.3378/027.083.0103DOI Listing
February 2011

The ratio of human X chromosome to autosome diversity is positively correlated with genetic distance from genes.

Authors:
Michael F Hammer August E Woerner Fernando L Mendez Joseph C Watkins Murray P Cox Jeffrey D Wall

Nat Genet 2010 Oct 29;42(10):830-1. Epub 2010 Aug 29.

Arizona Research Laboratories, Division of Biotechnology, University of Arizona, Tucson, Arizona, USA.

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http://dx.doi.org/10.1038/ng.651DOI Listing
October 2010

Ultrasonic output from the excised rat larynx.

Authors:
Aaron M Johnson Michelle R Ciucci John A Russell Michael J Hammer Nadine P Connor

J Acoust Soc Am 2010 Aug;128(2):EL75-9

Department of Surgery, Clinical Science Center, University of Wisconsin-Madison, 600 Highland Avenue, Madison, Wisconsin 53792, USA.

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http://dx.doi.org/10.1121/1.3462234DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2924901PMC
August 2010