Michael Brent

Michael Brent

UNVERIFIED PROFILE

Are you Michael Brent?   Register this Author

Register author
Michael Brent

Michael Brent

Publications by authors named "Michael Brent"

Are you Michael Brent?   Register this Author

100Publications

1980Reads

35Profile Views

Hypotensive efficacy of topical brimonidine for intraocular pressure spikes following intravitreal injections of antivascular endothelial growth factor agents: a randomised crossover trial.

Br J Ophthalmol 2019 Oct 20;103(10):1388-1394. Epub 2018 Dec 20.

Department of Ophthalmology and Vision Sciences, Toronto Western Hospital, University Health Network, University of Toronto, Toronto, Ontario, Canada

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1136/bjophthalmol-2018-312603DOI Listing
October 2019

Retinal blood oxygen saturation and aqueous humour biomarkers in early diabetic retinopathy.

Acta Ophthalmol 2019 Aug 28;97(5):e673-e679. Epub 2019 Jan 28.

Retina Research Group, School of Optometry and Vision Science, University of Waterloo, Waterloo, Ontario, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/aos.14016DOI Listing
August 2019

Toronto tele-retinal screening program for detection of diabetic retinopathy and macular edema.

Can J Ophthalmol 2019 Apr 23;54(2):203-211. Epub 2018 Aug 23.

Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ont., Canada; Toronto Western Hospital, University Health Network, University of Toronto, Toronto, Ont., Canada.. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jcjo.2018.07.004DOI Listing
April 2019

Bone mineral density in patients with longstanding type 1 diabetes: Results from the Canadian Study of Longevity in Type 1 Diabetes.

J Diabetes Complications 2018 Dec 22:107324. Epub 2018 Dec 22.

Division of Endocrinology and Metabolism, Department of Medicine, University of Toronto, Toronto, Ontario, Canada; Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada. Electronic address:

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S10568727183108
Publisher Site
http://dx.doi.org/10.1016/j.jdiacomp.2018.12.009DOI Listing
December 2018

Recurrent visual field defect associated with migraine resulting in a hemiretinal artery occlusion.

Can J Ophthalmol 2018 06 6;53(3):e92-e94. Epub 2017 Nov 6.

University of Toronto, Toronto, Ont. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jcjo.2017.08.023DOI Listing
June 2018

Seven-Up Is a Novel Regulator of Insulin Signaling.

Genetics 2018 04 27;208(4):1643-1656. Epub 2018 Feb 27.

Division of Endocrinology, Metabolism, and Lipid Research, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63110.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1534/genetics.118.300770DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5887154PMC
April 2018

EFFECT OF AN INTRAVITREAL DEXAMETHASONE IMPLANT ON DIABETIC MACULAR EDEMA AFTER CATARACT SURGERY.

Retina 2018 Mar;38(3):490-496

Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1097/IAE.0000000000001552DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5841849PMC
March 2018

Unintended Side Effects of Transformation Are Very Rare in .

G3 (Bethesda) 2018 03 2;8(3):815-822. Epub 2018 Mar 2.

Center for Genome Sciences and Systems Biology, Washington University School of Medicine, Saint Louis, Missouri 63110

View Article

Download full-text PDF

Source
http://g3journal.org/lookup/doi/10.1534/g3.117.300357
Publisher Site
http://dx.doi.org/10.1534/g3.117.300357DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5844303PMC
March 2018

The reading accessibility index and quality of reading grid of patients with central vision loss.

Ophthalmic Physiol Opt 2018 01;38(1):88-97

Krembil Research Institute, Toronto Western Hospital, Toronto, Canada.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1111/opo.12429
Publisher Site
http://dx.doi.org/10.1111/opo.12429DOI Listing
January 2018

Lower corneal nerve fibre length identifies diabetic neuropathy in older adults with diabetes: results from the Canadian Study of Longevity in Type 1 Diabetes.

Diabetologia 2017 12 3;60(12):2529-2531. Epub 2017 Oct 3.

Lunenfeld-Tanenbaum Research Institute, Leadership Sinai Centre for Diabetes, Mount Sinai Hospital, L5209-60 Murray Street Box 16, Toronto, ON, M5T 3L9, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00125-017-4439-4DOI Listing
December 2017

The role of occult hypertension in retinal vein occlusions and diabetic retinopathy.

Can J Ophthalmol 2017 Nov;52 Suppl 1:S30-S33

Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ont. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jcjo.2017.09.024DOI Listing
November 2017

Cost-Utility Analysis of Extending Public Health Insurance Coverage to Include Diabetic Retinopathy Screening by Optometrists.

Value Health 2017 09 1;20(8):1034-1040. Epub 2017 Jun 1.

Clinical Epidemiology Program, Ottawa Hospital Research Institute, The Ottawa Hospital, Ottawa, Ontario, Canada; School of Epidemiology, Public Health and Preventive Medicine, University of Ottawa; Ottawa, Ontario, Canada; Institute of Clinical Evaluative Sciences (ICES UOttawa), Ottawa, Ontario, Canada. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jval.2017.04.015DOI Listing
September 2017

NetProphet 2.0: Mapping Transcription Factor Networks by Exploiting Scalable Data Resources.

Bioinformatics 2017 09 12. Epub 2017 Sep 12.

Department of Computer Science and Engineering and Center for Genome Sciences and Systems Biology, Washington University. One Brookings Dr. Saint Louis, MO 63108.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btx563DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5860202PMC
September 2017

Neuropathy and presence of emotional distress and depression in longstanding diabetes: Results from the Canadian study of longevity in type 1 diabetes.

J Diabetes Complications 2017 Aug 10;31(8):1318-1324. Epub 2017 May 10.

Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada; Division of Endocrinology and Metabolism, Department of Medicine, University of Toronto, Toronto, Ontario, Canada. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jdiacomp.2017.05.002DOI Listing
August 2017

The role of occult hypertension in retinal vein occlusions and diabetic retinopathy.

Can J Ophthalmol 2017 Apr 9;52(2):225-228. Epub 2017 Jan 9.

Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ont. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jcjo.2016.09.009DOI Listing
April 2017

Genetic Risk Evaluation in Wet Age-Related Macular Degeneration Treatment Response.

Ophthalmologica 2016 1;236(2):88-94. Epub 2016 Jul 1.

Division of Ophthalmology, Department of Surgery, Hamilton Regional Eye Institute, St. Joseph's Healthcare Hamilton, McMaster University, Hamilton, Ont., Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1159/000446819DOI Listing
January 2017

Past Roadblocks and New Opportunities in Transcription Factor Network Mapping.

Authors:
Michael R Brent

Trends Genet 2016 11 6;32(11):736-750. Epub 2016 Oct 6.

Departments of Computer Science and Genetics and Center for Genome Sciences and Systems Biology, Washington University, , Saint Louis, MO, USA. Electronic address:

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S01689525163010
Publisher Site
http://dx.doi.org/10.1016/j.tig.2016.08.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5117949PMC
November 2016

Model-based transcriptome engineering promotes a fermentative transcriptional state in yeast.

Proc Natl Acad Sci U S A 2016 11 3;113(47):E7428-E7437. Epub 2016 Nov 3.

Center for Genome Sciences and Systems Biology, Washington University in St. Louis, St. Louis, MO 63108;

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.1603577113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5127345PMC
November 2016

Characteristics of the preferred retinal loci of better and worse seeing eyes of patients with a central scotoma.

Can J Ophthalmol 2016 Oct 23;51(5):362-367. Epub 2016 Apr 23.

Vision Science Research Program, Toronto Western Hospital, Toronto, Ont.; Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ont.; Centre for Vision Research, York University, Toronto, Ont.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jcjo.2016.01.007DOI Listing
October 2016

Prevalence of Insulin Pump Therapy and Its Association with Measures of Glycemic Control: Results from the Canadian Study of Longevity in Type 1 Diabetes.

Diabetes Technol Ther 2016 05 29;18(5):298-307. Epub 2016 Mar 29.

1 Division of Endocrinology and Metabolism, Department of Medicine, Mount Sinai Hospital, University of Toronto , Toronto, Ontario, Canada .

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1089/dia.2015.0216DOI Listing
May 2016

Cardiovascular disease guideline adherence and self-reported statin use in longstanding type 1 diabetes: results from the Canadian study of longevity in diabetes cohort.

Cardiovasc Diabetol 2016 Jan 25;15:14. Epub 2016 Jan 25.

Division of Endocrinology and Metabolism, Department of Medicine, University of Toronto, Leadership Sinai Centre for Diabetes, Mount Sinai Hospital, L5-210, 60 Murray Street, Mail Box 16, Toronto, ON, M5T 3L9, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12933-015-0318-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4727297PMC
January 2016

Retinal Blood Flow and Retinal Blood Oxygen Saturation in Mild to Moderate Diabetic Retinopathy.

Invest Ophthalmol Vis Sci 2015 Oct;56(11):6796-800

Retina Research Group, School of Optometry and Vision Science, University of Waterloo, Waterloo, Ontario, Canada 2Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ontario, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1167/iovs.15-17481DOI Listing
October 2015

Dexamethasone intravitreal implant as adjunct therapy for patients with wet age-related macular degeneration with incomplete response to ranibizumab.

Br J Ophthalmol 2015 Jun 25;99(6):723-6. Epub 2014 Nov 25.

Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ontario, Canada Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1136/bjophthalmol-2014-305684DOI Listing
June 2015

Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation.

Genome Res 2015 May 2;25(5):690-700. Epub 2015 Feb 2.

Center for Genome Sciences and Systems Biology, Washington University in St. Louis, St. Louis, Missouri 63108, USA; Department of Computer Science and Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, USA; Department of Genetics, Washington University in St. Louis School of Medicine, St. Louis, Missouri 63110, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.184101.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4417117PMC
May 2015

Treatment of retinitis pigmentosa-related cystoid macular edema with intravitreous ranibizumab.

Retin Cases Brief Rep 2010 ;4(4):291-3

From the *Retina Service, Toronto Western Hospital, University Health Network; and †Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ontario, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1097/ICB.0b013e3181af7b6cDOI Listing
November 2014

Reading training with threshold stimuli in people with central vision loss: a feasibility study.

Optom Vis Sci 2014 Jan;91(1):86-96

*PhD †MD Vision Science Research Program, Toronto Western Hospital, Toronto, Ontario, Canada (LT-N, MHB, MJS, SNM, EGG); Centre for Vision Research, York University, Toronto, Ontario, Canada (LT-N, MJS, EGG); and Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ontario, Canada (MHB, MJS, SNM, EGG).

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1097/OPX.0000000000000108DOI Listing
January 2014

Maximum reading speed and binocular summation in patients with central vision loss.

Can J Ophthalmol 2013 Oct;48(5):443-9

Vision Science Research Program, Toronto Western Hospital; Centre for Vision Research, York University.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jcjo.2013.04.005DOI Listing
October 2013

Mapping functional transcription factor networks from gene expression data.

Genome Res 2013 Aug 1;23(8):1319-28. Epub 2013 May 1.

Center for Genome Sciences and Systems Biology, Washington University, Saint Louis, Missouri 63108, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.150904.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3730105PMC
August 2013

Role of fat body lipogenesis in protection against the effects of caloric overload in Drosophila.

J Biol Chem 2013 Mar 25;288(12):8028-42. Epub 2013 Jan 25.

Division of Endocrinology, Metabolism, and Lipid Research, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63110, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M112.371047DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3605622PMC
March 2013

Courier: a better font for reading with age-related macular degeneration.

Can J Ophthalmol 2013 Feb;48(1):56-62

Vision Science Research Program, Toronto Western Hospital, Toronto, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jcjo.2012.09.017DOI Listing
February 2013

Reduced DICER1 elicits an interferon response in endometrial cancer cells.

Mol Cancer Res 2012 Mar 17;10(3):316-25. Epub 2012 Jan 17.

Department of Surgery, Division of Gynecologic Oncology, Washington University School of Medicine, 660 South Euclid Avenue, Saint Louis, MO 63110, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1541-7786.MCR-11-0520DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3307918PMC
March 2012

Fixation patterns in maculopathy: from binocular to monocular viewing.

Optom Vis Sci 2012 Mar;89(3):277-87

Vision Science Research Program, Toronto Western Hospital, Toronto, Ontario, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1097/OPX.0b013e318244e8b1DOI Listing
March 2012

Retinal blood flow in response to an intravitreal injection of ranibizumab for neovascular age-related macular degeneration.

Acta Ophthalmol 2012 Feb 29;90(1):e13-20. Epub 2011 Jul 29.

Retina Research Group, Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, Ontario, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1755-3768.2011.02209.xDOI Listing
February 2012

SIRT1 contains N- and C-terminal regions that potentiate deacetylase activity.

J Biol Chem 2012 Jan 7;287(4):2468-76. Epub 2011 Dec 7.

Wistar Institute, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M111.285031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3268407PMC
January 2012

Toward an integrated model of capsule regulation in Cryptococcus neoformans.

PLoS Pathog 2011 Dec 8;7(12):e1002411. Epub 2011 Dec 8.

Center for Genome Sciences and Systems Biology and Departments of Computer Science and Genetics, Washington University School of Medicine, St. Louis, Missouri, United States of America.

View Article

Download full-text PDF

Source
http://dx.plos.org/10.1371/journal.ppat.1002411
Publisher Site
http://dx.doi.org/10.1371/journal.ppat.1002411DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3234223PMC
December 2011

High-resolution optical coherence tomography retinal imaging: a case series illustrating potential and limitations.

J Ophthalmol 2011 29;2011:764183. Epub 2011 Sep 29.

Retina Research Group, Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, ON, M5T 2S8, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1155/2011/764183DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182576PMC
November 2011

Fixation stability during binocular viewing in patients with age-related macular degeneration.

Invest Ophthalmol Vis Sci 2011 Mar 30;52(3):1887-93. Epub 2011 Mar 30.

Vision Science Research Program, Toronto Western Hospital, Toronto, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1167/iovs.10-6059DOI Listing
March 2011

Identification of functional elements and regulatory circuits by Drosophila modENCODE.

Science 2010 Dec 22;330(6012):1787-97. Epub 2010 Dec 22.

Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.

View Article

Download full-text PDF

Source
http://compbio.mit.edu/publications/46_modENCODE_Science_10.
Web Search
http://www.sciencemag.org/cgi/doi/10.1126/science.1198374
Publisher Site
http://dx.doi.org/10.1126/science.1198374DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3192495PMC
December 2010

A quantitative model of glucose signaling in yeast reveals an incoherent feed forward loop leading to a specific, transient pulse of transcription.

Proc Natl Acad Sci U S A 2010 Sep 1;107(38):16743-8. Epub 2010 Sep 1.

Center for Genome Sciences and Systems Biology, Washington University, St. Louis, MO 63130, USA.

View Article

Download full-text PDF

Source
http://www.pnas.org/cgi/doi/10.1073/pnas.0912483107
Publisher Site
http://dx.doi.org/10.1073/pnas.0912483107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2944743PMC
September 2010

The completion of the Mammalian Gene Collection (MGC).

Authors:
Gary Temple Daniela S Gerhard Rebekah Rasooly Elise A Feingold Peter J Good Cristen Robinson Allison Mandich Jeffrey G Derge Jeanne Lewis Debonny Shoaf Francis S Collins Wonhee Jang Lukas Wagner Carolyn M Shenmen Leonie Misquitta Carl F Schaefer Kenneth H Buetow Tom I Bonner Linda Yankie Ming Ward Lon Phan Alex Astashyn Garth Brown Catherine Farrell Jennifer Hart Melissa Landrum Bonnie L Maidak Michael Murphy Terence Murphy Bhanu Rajput Lillian Riddick David Webb Janet Weber Wendy Wu Kim D Pruitt Donna Maglott Adam Siepel Brona Brejova Mark Diekhans Rachel Harte Robert Baertsch Jim Kent David Haussler Michael Brent Laura Langton Charles L G Comstock Michael Stevens Chaochun Wei Marijke J van Baren Kourosh Salehi-Ashtiani Ryan R Murray Lila Ghamsari Elizabeth Mello Chenwei Lin Christa Pennacchio Kirsten Schreiber Nicole Shapiro Amber Marsh Elizabeth Pardes Troy Moore Anita Lebeau Mike Muratet Blake Simmons David Kloske Stephanie Sieja James Hudson Praveen Sethupathy Michael Brownstein Narayan Bhat Joseph Lazar Howard Jacob Chris E Gruber Mark R Smith John McPherson Angela M Garcia Preethi H Gunaratne Jiaqian Wu Donna Muzny Richard A Gibbs Alice C Young Gerard G Bouffard Robert W Blakesley Jim Mullikin Eric D Green Mark C Dickson Alex C Rodriguez Jane Grimwood Jeremy Schmutz Richard M Myers Martin Hirst Thomas Zeng Kane Tse Michelle Moksa Merinda Deng Kevin Ma Diana Mah Johnson Pang Greg Taylor Eric Chuah Athena Deng Keith Fichter Anne Go Stephanie Lee Jing Wang Malachi Griffith Ryan Morin Richard A Moore Michael Mayo Sarah Munro Susan Wagner Steven J M Jones Robert A Holt Marco A Marra Sun Lu Shuwei Yang James Hartigan Marcus Graf Ralf Wagner Stanley Letovksy Jacqueline C Pulido Keith Robison Dominic Esposito James Hartley Vanessa E Wall Ralph F Hopkins Osamu Ohara Stefan Wiemann

Pairagon: a highly accurate, HMM-based cDNA-to-genome aligner.

Bioinformatics 2009 Jul 4;25(13):1587-93. Epub 2009 May 4.

Department of Computer Science and Center for Genome Sciences, Washington University, St. Louis, MO 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btp273DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2732315PMC
July 2009

Structure and biochemical characterization of protein acetyltransferase from Sulfolobus solfataricus.

J Biol Chem 2009 Jul 27;284(29):19412-9. Epub 2009 May 27.

Wistar Institute, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M109.014951DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2740566PMC
July 2009

Benchmarking regulatory network reconstruction with GRENDEL.

Bioinformatics 2009 Mar 2;25(6):801-7. Epub 2009 Feb 2.

Center for Genome Sciences and Department of Computer Science, Washington University, St Louis, MO, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btp068DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2732301PMC
March 2009

Structural basis for DNA recognition by FoxO1 and its regulation by posttranslational modification.

Structure 2008 Sep;16(9):1407-16

The Wistar Institute, University of Pennsylvania, Philadelphia, PA 19104, USA; The Department of Chemistry, University of Pennsylvania, Philadelphia, PA 19104, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.str.2008.06.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2597217PMC
September 2008

Tubular aggregate myopathy associated with retinal degeneration.

Can J Ophthalmol 2008 Jun;43(3):361-3

Department of Ophthalmology & Vision Sciences, Division of Neurology, University of Toronto, Toronto, Ontario, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3129/i08-038DOI Listing
June 2008

Biochemical analysis of MST1 kinase: elucidation of a C-terminal regulatory region.

Biochemistry 2008 Jun;47(25):6719-26

The Wistar Institute, 3601 Spruce Street, Philadelphia, Pennsylvania 19104, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/bi800309mDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2844906PMC
June 2008

wuHMM: a robust algorithm to detect DNA copy number variation using long oligonucleotide microarray data.

Nucleic Acids Res 2008 Apr 11;36(7):e41. Epub 2008 Mar 11.

Department of Internal Medicine and Department of Genetics, Division of Oncology, Stem Cell Biology Section, Washington University, St Louis, MO, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkn110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2367727PMC
April 2008

Ankyrin for methylated lysines.

Nat Struct Mol Biol 2008 Mar;15(3):221-2

View Article

Download full-text PDF

Source
http://www.nature.com/articles/nsmb0308-221
Publisher Site
http://dx.doi.org/10.1038/nsmb0308-221DOI Listing
March 2008

Steady progress and recent breakthroughs in the accuracy of automated genome annotation.

Authors:
Michael R Brent

Nat Rev Genet 2008 Jan;9(1):62-73

Center for Genome Sciences, Campus BOX 8510, Washington University, 4444 Forest Park Blvd, Saint Louis, Missouri 63108, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nrg2220DOI Listing
January 2008

Using N-SCAN or TWINSCAN to predict gene structures in genomic DNA sequences.

Curr Protoc Bioinformatics 2007 Dec;Chapter 4:Unit 4.8

Washington University, St. Louis, Missouri, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/0471250953.bi0408s20DOI Listing
December 2007

Evolution of genes and genomes on the Drosophila phylogeny.

Authors:
Andrew G Clark Michael B Eisen Douglas R Smith Casey M Bergman Brian Oliver Therese A Markow Thomas C Kaufman Manolis Kellis William Gelbart Venky N Iyer Daniel A Pollard Timothy B Sackton Amanda M Larracuente Nadia D Singh Jose P Abad Dawn N Abt Boris Adryan Montserrat Aguade Hiroshi Akashi Wyatt W Anderson Charles F Aquadro David H Ardell Roman Arguello Carlo G Artieri Daniel A Barbash Daniel Barker Paolo Barsanti Phil Batterham Serafim Batzoglou Dave Begun Arjun Bhutkar Enrico Blanco Stephanie A Bosak Robert K Bradley Adrianne D Brand Michael R Brent Angela N Brooks Randall H Brown Roger K Butlin Corrado Caggese Brian R Calvi A Bernardo de Carvalho Anat Caspi Sergio Castrezana Susan E Celniker Jean L Chang Charles Chapple Sourav Chatterji Asif Chinwalla Alberto Civetta Sandra W Clifton Josep M Comeron James C Costello Jerry A Coyne Jennifer Daub Robert G David Arthur L Delcher Kim Delehaunty Chuong B Do Heather Ebling Kevin Edwards Thomas Eickbush Jay D Evans Alan Filipski Sven Findeiss Eva Freyhult Lucinda Fulton Robert Fulton Ana C L Garcia Anastasia Gardiner David A Garfield Barry E Garvin Greg Gibson Don Gilbert Sante Gnerre Jennifer Godfrey Robert Good Valer Gotea Brenton Gravely Anthony J Greenberg Sam Griffiths-Jones Samuel Gross Roderic Guigo Erik A Gustafson Wilfried Haerty Matthew W Hahn Daniel L Halligan Aaron L Halpern Gillian M Halter Mira V Han Andreas Heger LaDeana Hillier Angie S Hinrichs Ian Holmes Roger A Hoskins Melissa J Hubisz Dan Hultmark Melanie A Huntley David B Jaffe Santosh Jagadeeshan William R Jeck Justin Johnson Corbin D Jones William C Jordan Gary H Karpen Eiko Kataoka Peter D Keightley Pouya Kheradpour Ewen F Kirkness Leonardo B Koerich Karsten Kristiansen Dave Kudrna Rob J Kulathinal Sudhir Kumar Roberta Kwok Eric Lander Charles H Langley Richard Lapoint Brian P Lazzaro So-Jeong Lee Lisa Levesque Ruiqiang Li Chiao-Feng Lin Michael F Lin Kerstin Lindblad-Toh Ana Llopart Manyuan Long Lloyd Low Elena Lozovsky Jian Lu Meizhong Luo Carlos A Machado Wojciech Makalowski Mar Marzo Muneo Matsuda Luciano Matzkin Bryant McAllister Carolyn S McBride Brendan McKernan Kevin McKernan Maria Mendez-Lago Patrick Minx Michael U Mollenhauer Kristi Montooth Stephen M Mount Xu Mu Eugene Myers Barbara Negre Stuart Newfeld Rasmus Nielsen Mohamed A F Noor Patrick O'Grady Lior Pachter Montserrat Papaceit Matthew J Parisi Michael Parisi Leopold Parts Jakob S Pedersen Graziano Pesole Adam M Phillippy Chris P Ponting Mihai Pop Damiano Porcelli Jeffrey R Powell Sonja Prohaska Kim Pruitt Marta Puig Hadi Quesneville Kristipati Ravi Ram David Rand Matthew D Rasmussen Laura K Reed Robert Reenan Amy Reily Karin A Remington Tania T Rieger Michael G Ritchie Charles Robin Yu-Hui Rogers Claudia Rohde Julio Rozas Marc J Rubenfield Alfredo Ruiz Susan Russo Steven L Salzberg Alejandro Sanchez-Gracia David J Saranga Hajime Sato Stephen W Schaeffer Michael C Schatz Todd Schlenke Russell Schwartz Carmen Segarra Rama S Singh Laura Sirot Marina Sirota Nicholas B Sisneros Chris D Smith Temple F Smith John Spieth Deborah E Stage Alexander Stark Wolfgang Stephan Robert L Strausberg Sebastian Strempel David Sturgill Granger Sutton Granger G Sutton Wei Tao Sarah Teichmann Yoshiko N Tobari Yoshihiko Tomimura Jason M Tsolas Vera L S Valente Eli Venter J Craig Venter Saverio Vicario Filipe G Vieira Albert J Vilella Alfredo Villasante Brian Walenz Jun Wang Marvin Wasserman Thomas Watts Derek Wilson Richard K Wilson Rod A Wing Mariana F Wolfner Alex Wong Gane Ka-Shu Wong Chung-I Wu Gabriel Wu Daisuke Yamamoto Hsiao-Pei Yang Shiaw-Pyng Yang James A Yorke Kiyohito Yoshida Evgeny Zdobnov Peili Zhang Yu Zhang Aleksey V Zimin Jennifer Baldwin Amr Abdouelleil Jamal Abdulkadir Adal Abebe Brikti Abera Justin Abreu St Christophe Acer Lynne Aftuck Allen Alexander Peter An Erica Anderson Scott Anderson Harindra Arachi Marc Azer Pasang Bachantsang Andrew Barry Tashi Bayul Aaron Berlin Daniel Bessette Toby Bloom Jason Blye Leonid Boguslavskiy Claude Bonnet Boris Boukhgalter Imane Bourzgui Adam Brown Patrick Cahill Sheridon Channer Yama Cheshatsang Lisa Chuda Mieke Citroen Alville Collymore Patrick Cooke Maura Costello Katie D'Aco Riza Daza Georgius De Haan Stuart DeGray Christina DeMaso Norbu Dhargay Kimberly Dooley Erin Dooley Missole Doricent Passang Dorje Kunsang Dorjee Alan Dupes Richard Elong Jill Falk Abderrahim Farina Susan Faro Diallo Ferguson Sheila Fisher Chelsea D Foley Alicia Franke Dennis Friedrich Loryn Gadbois Gary Gearin Christina R Gearin Georgia Giannoukos Tina Goode Joseph Graham Edward Grandbois Sharleen Grewal Kunsang Gyaltsen Nabil Hafez Birhane Hagos Jennifer Hall Charlotte Henson Andrew Hollinger Tracey Honan Monika D Huard Leanne Hughes Brian Hurhula M Erii Husby Asha Kamat Ben Kanga Seva Kashin Dmitry Khazanovich Peter Kisner Krista Lance Marcia Lara William Lee Niall Lennon Frances Letendre Rosie LeVine Alex Lipovsky Xiaohong Liu Jinlei Liu Shangtao Liu Tashi Lokyitsang Yeshi Lokyitsang Rakela Lubonja Annie Lui Pen MacDonald Vasilia Magnisalis Kebede Maru Charles Matthews William McCusker Susan McDonough Teena Mehta James Meldrim Louis Meneus Oana Mihai Atanas Mihalev Tanya Mihova Rachel Mittelman Valentine Mlenga Anna Montmayeur Leonidas Mulrain Adam Navidi Jerome Naylor Tamrat Negash Thu Nguyen Nga Nguyen Robert Nicol Choe Norbu Nyima Norbu Nathaniel Novod Barry O'Neill Sahal Osman Eva Markiewicz Otero L Oyono Christopher Patti Pema Phunkhang Fritz Pierre Margaret Priest Sujaa Raghuraman Filip Rege Rebecca Reyes Cecil Rise Peter Rogov Keenan Ross Elizabeth Ryan Sampath Settipalli Terry Shea Ngawang Sherpa Lu Shi Diana Shih Todd Sparrow Jessica Spaulding John Stalker Nicole Stange-Thomann Sharon Stavropoulos Catherine Stone Christopher Strader Senait Tesfaye Talene Thomson Yama Thoulutsang Dawa Thoulutsang Kerri Topham Ira Topping Tsamla Tsamla Helen Vassiliev Andy Vo Tsering Wangchuk Tsering Wangdi Michael Weiand Jane Wilkinson Adam Wilson Shailendra Yadav Geneva Young Qing Yu Lisa Zembek Danni Zhong Andrew Zimmer Zac Zwirko David B Jaffe Pablo Alvarez Will Brockman Jonathan Butler CheeWhye Chin Sante Gnerre Manfred Grabherr Michael Kleber Evan Mauceli Iain MacCallum

Nature 2007 Nov;450(7167):203-18

Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nature06341DOI Listing
November 2007

Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping.

Nat Methods 2007 Aug 24;4(8):659-64. Epub 2007 Jun 24.

Program in Gene Function and Expression and Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts 01605, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nmeth1063DOI Listing
August 2007

How does eukaryotic gene prediction work?

Authors:
Michael R Brent

Nat Biotechnol 2007 Aug;25(8):883-5

Center for Genome Sciences, Campus Box 1045, Washington University, One Brookings Drive, Saint Louis, Missouri 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nbt0807-883DOI Listing
August 2007

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Authors:
Ewan Birney John A Stamatoyannopoulos Anindya Dutta Roderic Guigó Thomas R Gingeras Elliott H Margulies Zhiping Weng Michael Snyder Emmanouil T Dermitzakis Robert E Thurman Michael S Kuehn Christopher M Taylor Shane Neph Christoph M Koch Saurabh Asthana Ankit Malhotra Ivan Adzhubei Jason A Greenbaum Robert M Andrews Paul Flicek Patrick J Boyle Hua Cao Nigel P Carter Gayle K Clelland Sean Davis Nathan Day Pawandeep Dhami Shane C Dillon Michael O Dorschner Heike Fiegler Paul G Giresi Jeff Goldy Michael Hawrylycz Andrew Haydock Richard Humbert Keith D James Brett E Johnson Ericka M Johnson Tristan T Frum Elizabeth R Rosenzweig Neerja Karnani Kirsten Lee Gregory C Lefebvre Patrick A Navas Fidencio Neri Stephen C J Parker Peter J Sabo Richard Sandstrom Anthony Shafer David Vetrie Molly Weaver Sarah Wilcox Man Yu Francis S Collins Job Dekker Jason D Lieb Thomas D Tullius Gregory E Crawford Shamil Sunyaev William S Noble Ian Dunham France Denoeud Alexandre Reymond Philipp Kapranov Joel Rozowsky Deyou Zheng Robert Castelo Adam Frankish Jennifer Harrow Srinka Ghosh Albin Sandelin Ivo L Hofacker Robert Baertsch Damian Keefe Sujit Dike Jill Cheng Heather A Hirsch Edward A Sekinger Julien Lagarde Josep F Abril Atif Shahab Christoph Flamm Claudia Fried Jörg Hackermüller Jana Hertel Manja Lindemeyer Kristin Missal Andrea Tanzer Stefan Washietl Jan Korbel Olof Emanuelsson Jakob S Pedersen Nancy Holroyd Ruth Taylor David Swarbreck Nicholas Matthews Mark C Dickson Daryl J Thomas Matthew T Weirauch James Gilbert Jorg Drenkow Ian Bell XiaoDong Zhao K G Srinivasan Wing-Kin Sung Hong Sain Ooi Kuo Ping Chiu Sylvain Foissac Tyler Alioto Michael Brent Lior Pachter Michael L Tress Alfonso Valencia Siew Woh Choo Chiou Yu Choo Catherine Ucla Caroline Manzano Carine Wyss Evelyn Cheung Taane G Clark James B Brown Madhavan Ganesh Sandeep Patel Hari Tammana Jacqueline Chrast Charlotte N Henrichsen Chikatoshi Kai Jun Kawai Ugrappa Nagalakshmi Jiaqian Wu Zheng Lian Jin Lian Peter Newburger Xueqing Zhang Peter Bickel John S Mattick Piero Carninci Yoshihide Hayashizaki Sherman Weissman Tim Hubbard Richard M Myers Jane Rogers Peter F Stadler Todd M Lowe Chia-Lin Wei Yijun Ruan Kevin Struhl Mark Gerstein Stylianos E Antonarakis Yutao Fu Eric D Green Ulaş Karaöz Adam Siepel James Taylor Laura A Liefer Kris A Wetterstrand Peter J Good Elise A Feingold Mark S Guyer Gregory M Cooper George Asimenos Colin N Dewey Minmei Hou Sergey Nikolaev Juan I Montoya-Burgos Ari Löytynoja Simon Whelan Fabio Pardi Tim Massingham Haiyan Huang Nancy R Zhang Ian Holmes James C Mullikin Abel Ureta-Vidal Benedict Paten Michael Seringhaus Deanna Church Kate Rosenbloom W James Kent Eric A Stone Serafim Batzoglou Nick Goldman Ross C Hardison David Haussler Webb Miller Arend Sidow Nathan D Trinklein Zhengdong D Zhang Leah Barrera Rhona Stuart David C King Adam Ameur Stefan Enroth Mark C Bieda Jonghwan Kim Akshay A Bhinge Nan Jiang Jun Liu Fei Yao Vinsensius B Vega Charlie W H Lee Patrick Ng Atif Shahab Annie Yang Zarmik Moqtaderi Zhou Zhu Xiaoqin Xu Sharon Squazzo Matthew J Oberley David Inman Michael A Singer Todd A Richmond Kyle J Munn Alvaro Rada-Iglesias Ola Wallerman Jan Komorowski Joanna C Fowler Phillippe Couttet Alexander W Bruce Oliver M Dovey Peter D Ellis Cordelia F Langford David A Nix Ghia Euskirchen Stephen Hartman Alexander E Urban Peter Kraus Sara Van Calcar Nate Heintzman Tae Hoon Kim Kun Wang Chunxu Qu Gary Hon Rosa Luna Christopher K Glass M Geoff Rosenfeld Shelley Force Aldred Sara J Cooper Anason Halees Jane M Lin Hennady P Shulha Xiaoling Zhang Mousheng Xu Jaafar N S Haidar Yong Yu Yijun Ruan Vishwanath R Iyer Roland D Green Claes Wadelius Peggy J Farnham Bing Ren Rachel A Harte Angie S Hinrichs Heather Trumbower Hiram Clawson Jennifer Hillman-Jackson Ann S Zweig Kayla Smith Archana Thakkapallayil Galt Barber Robert M Kuhn Donna Karolchik Lluis Armengol Christine P Bird Paul I W de Bakker Andrew D Kern Nuria Lopez-Bigas Joel D Martin Barbara E Stranger Abigail Woodroffe Eugene Davydov Antigone Dimas Eduardo Eyras Ingileif B Hallgrímsdóttir Julian Huppert Michael C Zody Gonçalo R Abecasis Xavier Estivill Gerard G Bouffard Xiaobin Guan Nancy F Hansen Jacquelyn R Idol Valerie V B Maduro Baishali Maskeri Jennifer C McDowell Morgan Park Pamela J Thomas Alice C Young Robert W Blakesley Donna M Muzny Erica Sodergren David A Wheeler Kim C Worley Huaiyang Jiang George M Weinstock Richard A Gibbs Tina Graves Robert Fulton Elaine R Mardis Richard K Wilson Michele Clamp James Cuff Sante Gnerre David B Jaffe Jean L Chang Kerstin Lindblad-Toh Eric S Lander Maxim Koriabine Mikhail Nefedov Kazutoyo Osoegawa Yuko Yoshinaga Baoli Zhu Pieter J de Jong
June 2007

The Treeterbi and Parallel Treeterbi algorithms: efficient, optimal decoding for ordinary, generalized and pair HMMs.

Bioinformatics 2007 Mar 18;23(5):545-54. Epub 2007 Jan 18.

Laboratory for Computational Genomics, Campus Box 1045, Washington University, St. Louis, MO 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btl659DOI Listing
March 2007

A tale of two templates: automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices.

Genome Res 2007 Feb 8;17(2):212-8. Epub 2007 Jan 8.

Laboratory for Computational Genomics and Department of Computer Science, Washington University, St. Louis, Missouri 63130, USA.

View Article

Download full-text PDF

Source
http://www.genome.org/cgi/doi/10.1101/gr.5661407
Publisher Site
http://dx.doi.org/10.1101/gr.5661407DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1781353PMC
February 2007

Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.

Genome Biol 2006 7;7 Suppl 1:S3.1-13. Epub 2006 Aug 7.

South African National Bioinformatics Institute, University of the Western Cape, Bellville 7535, South Africa.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/gb-2006-7-s1-s3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1810552PMC
September 2006

Pairagon+N-SCAN_EST: a model-based gene annotation pipeline.

Genome Biol 2006 7;7 Suppl 1:S5.1-10. Epub 2006 Aug 7.

Laboratory for Computational Genomics and Department of Computer Science, Washington University, One Brookings Drive, St, Louis, MO 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/gb-2006-7-s1-s5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1810554PMC
September 2006

Using several pair-wise informant sequences for de novo prediction of alternatively spliced transcripts.

Genome Biol 2006 7;7 Suppl 1:S8.1-9. Epub 2006 Aug 7.

European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

View Article

Download full-text PDF

Source
http://genomebiology.biomedcentral.com/articles/10.1186/gb-2
Publisher Site
http://dx.doi.org/10.1186/gb-2006-7-s1-s8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1810557PMC
September 2006

Using ESTs to improve the accuracy of de novo gene prediction.

BMC Bioinformatics 2006 Jul 3;7:327. Epub 2006 Jul 3.

Laboratory for Computational Genomics and Department of Computer Science and Engineering, Washington University, One Brookings Drive, St, Louis, MO 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-7-327DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1534067PMC
July 2006

Iterative gene prediction and pseudogene removal improves genome annotation.

Genome Res 2006 May;16(5):678-85

Laboratory for Computational Genomics, Department of Computer Science Washington University, Saint Louis, Missouri 63130, USA.

View Article

Download full-text PDF

Source
http://www.genome.org/cgi/doi/10.1101/gr.4766206
Publisher Site
http://dx.doi.org/10.1101/gr.4766206DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1457044PMC
May 2006

Using multiple alignments to improve gene prediction.

J Comput Biol 2006 Mar;13(2):379-93

Department of Computer Science and Engineering, Washington University, St. Louis, MO 63130, USA.

View Article

Download full-text PDF

Source
http://www.liebertpub.com/doi/10.1089/cmb.2006.13.379
Publisher Site
http://dx.doi.org/10.1089/cmb.2006.13.379DOI Listing
March 2006

Visual field expansion in patients with retinitis pigmentosa.

Can J Ophthalmol 2006 Feb;41(1):27-33

Low Vision Service, University Health Network Hospitals, Department of Ophthalmology and Vision Sciences, University of Toronto, Tronto, Ont.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/S0008-4182(06)80062-1DOI Listing
February 2006

Genome annotation past, present, and future: how to define an ORF at each locus.

Authors:
Michael R Brent

Genome Res 2005 Dec;15(12):1777-86

Laboratory for Computational Genomics and Department of Computer Science, Washington University, St. Louis, Missouri 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.3866105DOI Listing
December 2005

Begin at the beginning: predicting genes with 5' UTRs.

Genome Res 2005 May;15(5):742-7

Laboratory for Computational Genomics, Washington University, St. Louis, MO 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.3696205DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1088303PMC
May 2005

Gene finding in the chicken genome.

BMC Bioinformatics 2005 May 30;6:131. Epub 2005 May 30.

Institut Municipal d'Investigacio Medica, Universitat Pompeu Fabra, Centre de Regulacio Genomica, E08003 Barcelona, Catalonia, Spain.

View Article

Download full-text PDF

Source
http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
Publisher Site
http://dx.doi.org/10.1186/1471-2105-6-131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1174864PMC
May 2005

Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions.

Genome Res 2005 Apr;15(4):577-82

Laboratory for Computational Genomics and Department of Computer Science and Engineering, Washington University, St. Louis, Missouri 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.3329005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1074372PMC
April 2005

Gene prediction and verification in a compact genome with numerous small introns.

Genome Res 2004 Nov 12;14(11):2330-5. Epub 2004 Oct 12.

Laboratory for Computational Genomics and Department of Computer Science, Washington University, St. Louis, Missouri 63130, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.2816704DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC525692PMC
November 2004

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

Authors:
Daniela S Gerhard Lukas Wagner Elise A Feingold Carolyn M Shenmen Lynette H Grouse Greg Schuler Steven L Klein Susan Old Rebekah Rasooly Peter Good Mark Guyer Allison M Peck Jeffery G Derge David Lipman Francis S Collins Wonhee Jang Steven Sherry Mike Feolo Leonie Misquitta Eduardo Lee Kirill Rotmistrovsky Susan F Greenhut Carl F Schaefer Kenneth Buetow Tom I Bonner David Haussler Jim Kent Mark Kiekhaus Terry Furey Michael Brent Christa Prange Kirsten Schreiber Nicole Shapiro Narayan K Bhat Ralph F Hopkins Florence Hsie Tom Driscoll M Bento Soares Tom L Casavant Todd E Scheetz Michael J Brown-stein Ted B Usdin Shiraki Toshiyuki Piero Carninci Yulan Piao Dawood B Dudekula Minoru S H Ko Koichi Kawakami Yutaka Suzuki Sumio Sugano C E Gruber M R Smith Blake Simmons Troy Moore Richard Waterman Stephen L Johnson Yijun Ruan Chia Lin Wei S Mathavan Preethi H Gunaratne Jiaqian Wu Angela M Garcia Stephen W Hulyk Edwin Fuh Ye Yuan Anna Sneed Carla Kowis Anne Hodgson Donna M Muzny John McPherson Richard A Gibbs Jessica Fahey Erin Helton Mark Ketteman Anuradha Madan Stephanie Rodrigues Amy Sanchez Michelle Whiting Anup Madari Alice C Young Keith D Wetherby Steven J Granite Peggy N Kwong Charles P Brinkley Russell L Pearson Gerard G Bouffard Robert W Blakesly Eric D Green Mark C Dickson Alex C Rodriguez Jane Grimwood Jeremy Schmutz Richard M Myers Yaron S N Butterfield Malachi Griffith Obi L Griffith Martin I Krzywinski Nancy Liao Ryan Morin Ryan Morrin Diana Palmquist Anca S Petrescu Ursula Skalska Duane E Smailus Jeff M Stott Angelique Schnerch Jacqueline E Schein Steven J M Jones Robert A Holt Agnes Baross Marco A Marra Sandra Clifton Kathryn A Makowski Stephanie Bosak Joel Malek

Genome Res 2004 Oct;14(10B):2121-7

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.2596504DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC528928PMC
October 2004

Reexamining the vocabulary spurt.

Dev Psychol 2004 Jul;40(4):621-32

Department of Psychology, University of Pittsburgh, Pittsburgh, PA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1037/0012-1649.40.4.621DOI Listing
July 2004