Michael Barmada

Michael Barmada

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Michael Barmada

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Associating Symptom Phenotype and Genotype in Preeclampsia.

Biol Res Nurs 2018 03 22;20(2):126-136. Epub 2018 Jan 22.

4 University of Pittsburgh Graduate School of Public Health, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1177/1099800417754140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5942529PMC
March 2018

Genetic Basis of Irritant Susceptibility in Health Care Workers.

J Occup Environ Med 2016 08;58(8):753-9

Health Effects Laboratory Division (Drs Yucesoy, Kashon, Ms Frye, Wang, Ms Fluharty, Dr Meade), CDC/NIOSH, Morgantown, West Virginia; Department of Human Genetics (Drs Talzhanov and Barmada), University of Pittsburgh, Pennsylvania; BRT-Burleson Research Technologies (Dr Johnson), Morrisville, North Carolina; University Hospitals Case Medical Center (Drs Baron and Nedorost), Case Western Reserve University, Cleveland, Ohio; Department of Pediatrics, School of Medicine (Dr Wilson), University of Nevada, Reno; Department of Dermatology, School of Medicine (Dr Gharib), West Virginia University, Morgantown; Toxicology Branch, DNTP/NIEHS (Dr. Germolec), Research Triangle Park, North Carolina; and School of Public Health (Dr Luster), West Virginia University, Morgantown.

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http://dx.doi.org/10.1097/JOM.0000000000000784DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4980183PMC
August 2016

Needs Assessment for Research Use of High-Throughput Sequencing at a Large Academic Medical Center.

PLoS One 2015 26;10(6):e0131166. Epub 2015 Jun 26.

Department of Biomedical Informatics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America; University of Pittsburgh Cancer Institute, Pittsburgh, Pennsylvania, United States of America; Institute for Personalized Medicine, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0131166PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4483235PMC
April 2016

Genetic contribution of SCARB1 variants to lipid traits in African Blacks: a candidate gene association study.

BMC Med Genet 2015 Nov 12;16:106. Epub 2015 Nov 12.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, 130 DeSoto Street, Pittsburgh, PA, 15261, USA.

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http://dx.doi.org/10.1186/s12881-015-0250-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4643515PMC
November 2015

Resequencing of LPL in African Blacks and associations with lipoprotein-lipid levels.

Eur J Hum Genet 2015 Sep 28;23(9):1244-53. Epub 2015 Jan 28.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1038/ejhg.2014.268DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4538195PMC
September 2015

A rare duplication on chromosome 16p11.2 is identified in patients with psychosis in Alzheimer's disease.

PLoS One 2014 7;9(11):e111462. Epub 2014 Nov 7.

Department of Biostatistics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America; Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0111462PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4224411PMC
July 2015

Rarity of the Alzheimer disease-protective APP A673T variant in the United States.

Authors:
Li-San Wang Adam C Naj Robert R Graham Paul K Crane Brian W Kunkle Carlos Cruchaga Josue D Gonzalez Murcia Lisa Cannon-Albright Clinton T Baldwin Henrik Zetterberg Kaj Blennow Walter A Kukull Kelley M Faber Nicole Schupf Maria C Norton JoAnn T Tschanz Ronald G Munger Christopher D Corcoran Ekaterina Rogaeva Chiao-Feng Lin Beth A Dombroski Laura B Cantwell Amanda Partch Otto Valladares Hakon Hakonarson Peter St George-Hyslop Robert C Green Alison M Goate Tatiana M Foroud Regina M Carney Eric B Larson Timothy W Behrens John S K Kauwe Jonathan L Haines Lindsay A Farrer Margaret A Pericak-Vance Richard Mayeux Gerard D Schellenberg Marilyn S Albert Roger L Albin Liana G Apostolova Steven E Arnold Robert Barber Michael Barmada Lisa L Barnes Thomas G Beach James T Becker Gary W Beecham Duane Beekly David A Bennett Eileen H Bigio Thomas D Bird Deborah Blacker Bradley F Boeve James D Bowen Adam Boxer James R Burke Joseph D Buxbaum Nigel J Cairns Chuanhai Cao Chris S Carlson Steven L Carroll Helena C Chui David G Clark David H Cribbs Elizabeth A Crocco Charles DeCarli Steven T DeKosky F Yesim Demirci Malcolm Dick Dennis W Dickson Ranjan Duara Nilufer Ertekin-Taner Kenneth B Fallon Martin R Farlow Steven Ferris Matthew P Frosch Douglas R Galasko Mary Ganguli Marla Gearing Daniel H Geschwind Bernardino Ghetti John R Gilbert Jonathan D Glass Neill R Graff-Radford John H Growdon Ronald L Hamilton Kara L Hamilton-Nelson Lindy E Harrell Elizabeth Head Lawrence S Honig Christine M Hulette Bradley T Hyman Gail P Jarvik Gregory A Jicha Lee-Way Jin Gyungah Jun Gyungah Jun M Ilyas Kamboh Anna Karydas Jeffrey A Kaye Ronald Kim Edward H Koo Neil W Kowall Joel H Kramer Frank M LaFerla James J Lah James B Leverenz Allan I Levey Gei Li Andrew P Lieberman Oscar L Lopez Kathryn L Lunetta Constantine G Lyketsos Wendy J Mack Daniel C Marson Eden R Martin Frank Martiniuk Deborah C Mash Eliezer Masliah Wayne C McCormick Susan M McCurry Andrew N McDavid Ann C McKee W Marsel Mesulam Bruce L Miller Carol A Miller Joshua W Miller Thomas J Montine John C Morris Jill R Murrell John M Olichney Joseph E Parisi William Perry Elaine Peskind Ronald C Petersen Aimee Pierce Wayne W Poon Huntington Potter Joseph F Quinn Ashok Raj Murray Raskind Eric M Reiman Barry Reisberg Christiane Reitz John M Ringman Erik D Roberson Howard J Rosen Roger N Rosenberg Mary Sano Andrew J Saykin Julie A Schneider Lon S Schneider William W Seeley Amanda G Smith Joshua A Sonnen Salvatore Spina Robert A Stern Rudolph E Tanzi Tricia A Thornton-Wells John Q Trojanowski Juan C Troncoso Debby W Tsuang Vivianna M Van Deerlin Linda J Van Eldik Badri N Vardarajan Harry V Vinters Jean Paul Vonsattel Sandra Weintraub Kathleen A Welsh-Bohmer Jennifer Williamson Sarah Wishnek Randall L Woltjer Clinton B Wright Steven G Younkin Chang-En Yu Lei Yu

JAMA Neurol 2015 Feb;72(2):209-16

Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia.

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http://dx.doi.org/10.1001/jamaneurol.2014.2157DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4324097PMC
February 2015

Identifying genetic interactions associated with late-onset Alzheimer's disease.

BioData Min 2014 19;7(1):35. Epub 2014 Dec 19.

Department of Biomedical Informatics, University of Pittsburgh, 5607 Baum Boulevard, Pittsburgh, PA 15206 USA ; The Intelligent Systems Program, University of Pittsburgh, 5113 Sennott Square 210 South Bouquet Street, Pittsburgh, PA 15260 USA.

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http://dx.doi.org/10.1186/s13040-014-0035-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4300162PMC
February 2015

Connecting the dots: potential of data integration to identify regulatory SNPs in late-onset Alzheimer's disease GWAS findings.

PLoS One 2014 17;9(4):e95152. Epub 2014 Apr 17.

Department of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America; Alzheimer's Disease Research Center, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095152PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3990600PMC
December 2014

Impact of genetic variants in human scavenger receptor class B type I (SCARB1) on plasma lipid traits.

Circ Cardiovasc Genet 2014 Dec 22;7(6):838-47. Epub 2014 Sep 22.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1161/CIRCGENETICS.114.000559DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4270916PMC
December 2014

Effects of multiple genetic loci on age at onset in late-onset Alzheimer disease: a genome-wide association study.

Authors:
Adam C Naj Gyungah Jun Christiane Reitz Brian W Kunkle William Perry Yo Son Park Gary W Beecham Ruchita A Rajbhandary Kara L Hamilton-Nelson Li-San Wang John S K Kauwe Matthew J Huentelman Amanda J Myers Thomas D Bird Bradley F Boeve Clinton T Baldwin Gail P Jarvik Paul K Crane Ekaterina Rogaeva M Michael Barmada F Yesim Demirci Carlos Cruchaga Patricia L Kramer Nilufer Ertekin-Taner John Hardy Neill R Graff-Radford Robert C Green Eric B Larson Peter H St George-Hyslop Joseph D Buxbaum Denis A Evans Julie A Schneider Kathryn L Lunetta M Ilyas Kamboh Andrew J Saykin Eric M Reiman Philip L De Jager David A Bennett John C Morris Thomas J Montine Alison M Goate Deborah Blacker Debby W Tsuang Hakon Hakonarson Walter A Kukull Tatiana M Foroud Eden R Martin Jonathan L Haines Richard P Mayeux Lindsay A Farrer Gerard D Schellenberg Margaret A Pericak-Vance Marilyn S Albert Roger L Albin Liana G Apostolova Steven E Arnold Robert Barber Lisa L Barnes Thomas G Beach James T Becker Duane Beekly Eileen H Bigio James D Bowen Adam Boxer James R Burke Nigel J Cairns Laura B Cantwell Chuanhai Cao Chris S Carlson Regina M Carney Minerva M Carrasquillo Steven L Carroll Helena C Chui David G Clark Jason Corneveaux David H Cribbs Elizabeth A Crocco Charles DeCarli Steven T DeKosky Malcolm Dick Dennis W Dickson Ranjan Duara Kelley M Faber Kenneth B Fallon Martin R Farlow Steven Ferris Matthew P Frosch Douglas R Galasko Mary Ganguli Marla Gearing Daniel H Geschwind Bernardino Ghetti John R Gilbert Jonathan D Glass John H Growdon Ronald L Hamilton Lindy E Harrell Elizabeth Head Lawrence S Honig Christine M Hulette Bradley T Hyman Gregory A Jicha Lee-Way Jin Anna Karydas Jeffrey A Kaye Ronald Kim Edward H Koo Neil W Kowall Joel H Kramer Frank M LaFerla James J Lah James B Leverenz Allan I Levey Ge Li Andrew P Lieberman Chiao-Feng Lin Oscar L Lopez Constantine G Lyketsos Wendy J Mack Frank Martiniuk Deborah C Mash Eliezer Masliah Wayne C McCormick Susan M McCurry Andrew N McDavid Ann C McKee Marsel Mesulam Bruce L Miller Carol A Miller Joshua W Miller Jill R Murrell John M Olichney Vernon S Pankratz Joseph E Parisi Henry L Paulson Elaine Peskind Ronald C Petersen Aimee Pierce Wayne W Poon Huntington Potter Joseph F Quinn Ashok Raj Murray Raskind Barry Reisberg John M Ringman Erik D Roberson Howard J Rosen Roger N Rosenberg Mary Sano Lon S Schneider William W Seeley Amanda G Smith Joshua A Sonnen Salvatore Spina Robert A Stern Rudolph E Tanzi Tricia A Thornton-Wells John Q Trojanowski Juan C Troncoso Otto Valladares Vivianna M Van Deerlin Linda J Van Eldik Badri N Vardarajan Harry V Vinters Jean Paul Vonsattel Sandra Weintraub Kathleen A Welsh-Bohmer Jennifer Williamson Sarah Wishnek Randall L Woltjer Clinton B Wright Steven G Younkin Chang-En Yu Lei Yu

JAMA Neurol 2014 Nov;71(11):1394-404

Department of Neurological Sciences, Rush University Medical Center, Chicago, Illinois.

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http://dx.doi.org/10.1001/jamaneurol.2014.1491DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4314944PMC
November 2014

Mechanisms of CFTR functional variants that impair regulated bicarbonate permeation and increase risk for pancreatitis but not for cystic fibrosis.

PLoS Genet 2014 Jul 17;10(7):e1004376. Epub 2014 Jul 17.

Department of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America; Department of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America; Department of Cell Biology and Molecular Physiology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1004376DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4102440PMC
July 2014

Complex changes in the liver mitochondrial proteome of short chain acyl-CoA dehydrogenase deficient mice.

Mol Genet Metab 2014 May 12;112(1):30-9. Epub 2014 Mar 12.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, USA; Division of Medical Genetics, Children's Hospital of Pittsburgh, Pittsburgh, USA; Department of Pediatrics, School of Medicine, University of Pittsburgh, Pittsburgh, USA.

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http://dx.doi.org/10.1016/j.ymgme.2014.02.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4167795PMC
May 2014

Heritability of and mortality prediction with a longevity phenotype: the healthy aging index.

J Gerontol A Biol Sci Med Sci 2014 Apr 2;69(4):479-85. Epub 2013 Aug 2.

Graduate School of Public Health, University of Pittsburgh, A527 Crabtree Hall, 130 DeSoto Street, Pittsburgh, PA 15261.

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http://dx.doi.org/10.1093/gerona/glt117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3968826PMC
April 2014

The application of network label propagation to rank biomarkers in genome-wide Alzheimer's data.

BMC Genomics 2014 Apr 14;15:282. Epub 2014 Apr 14.

Department of Biomedical Informatics, University of Pittsburgh, 5607 Baum Boulevard, 15206 Pittsburgh, PA, USA.

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http://dx.doi.org/10.1186/1471-2164-15-282DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4234455PMC
April 2014

Lipoprotein lipase gene sequencing and plasma lipid profile.

J Lipid Res 2014 Jan 9;55(1):85-93. Epub 2013 Nov 9.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA; and.

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http://www.jlr.org/content/55/1/85.full.pdf
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http://www.jlr.org/cgi/doi/10.1194/jlr.M043265
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http://dx.doi.org/10.1194/jlr.M043265DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3927465PMC
January 2014

Biogenetic mechanisms predisposing to complex phenotypes in parents may function differently in their children.

J Gerontol A Biol Sci Med Sci 2013 Jul 4;68(7):760-8. Epub 2012 Dec 4.

Center for Population Health and Aging, Duke University, Box 90408, Trent Hall, Room 002, Durham, NC 27708, USA.

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http://dx.doi.org/10.1093/gerona/gls243DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3674715PMC
July 2013

Replication of European rheumatoid arthritis loci in a Pakistani population.

J Rheumatol 2013 Apr 1;40(4):401-7. Epub 2013 Feb 1.

Atta-Ur-Rahman School of Applied Biosciences (ASAB), National University of Science and Technology (NUST), Islamabad, Pakistan.

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http://dx.doi.org/10.3899/jrheum.121050DOI Listing
April 2013

Genome-wide association study of antiphospholipid antibodies.

Autoimmune Dis 2013 24;2013:761046. Epub 2013 Feb 24.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 15261, USA.

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http://dx.doi.org/10.1155/2013/761046DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3595708PMC
March 2013

Evaluating de novo locus-disease discoveries in GWAS using the signal-to-noise ratio.

AMIA Annu Symp Proc 2011 22;2011:617-24. Epub 2011 Oct 22.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243170PMC
February 2013

Vitamin D insufficiency and severe asthma exacerbations in Puerto Rican children.

Am J Respir Crit Care Med 2012 Jul 31;186(2):140-6. Epub 2012 May 31.

Division of Pediatric Pulmonary Medicine, Allergy and Immunology, Department of Pediatrics, Children's Hospital of Pittsburgh of UPMC, 4401 Penn Avenue, Pittsburgh, PA 15224, USA.

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http://dx.doi.org/10.1164/rccm.201203-0431OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3406083PMC
July 2012

Novel late-onset Alzheimer disease loci variants associate with brain gene expression.

Authors:
Mariet Allen Fanggeng Zou High Seng Chai Curtis S Younkin Julia Crook V Shane Pankratz Minerva M Carrasquillo Christopher N Rowley Asha A Nair Sumit Middha Sooraj Maharjan Thuy Nguyen Li Ma Kimberly G Malphrus Ryan Palusak Sarah Lincoln Gina Bisceglio Constantin Georgescu Debra Schultz Fariborz Rakhshan Christopher P Kolbert Jin Jen Jonathan L Haines Richard Mayeux Margaret A Pericak-Vance Lindsay A Farrer Gerard D Schellenberg Ronald C Petersen Neill R Graff-Radford Dennis W Dickson Steven G Younkin Nilüfer Ertekin-Taner Liana G Apostolova Steven E Arnold Clinton T Baldwin Robert Barber Michael M Barmada Thomas Beach Gary W Beecham Duane Beekly David A Bennett Eileen H Bigio Thomas D Bird Deborah Blacker Bradley F Boeve James D Bowen Adam Boxer James R Burke Jacqueline Buros Joseph D Buxbaum Nigel J Cairns Laura B Cantwell Chuanhai Cao Chris S Carlson Regina M Carney Steven L Carroll Helena C Chui David G Clark Jason Corneveaux Carl W Cotman Paul K Crane Carlos Cruchaga Jeffrey L Cummings Philip L De Jager Charles DeCarli Steven T DeKosky F Yesim Demirci Ramon Diaz-Arrastia Malcolm Dick Beth A Dombroski Ranjan Duara William D Ellis Denis Evans Kelley M Faber Kenneth B Fallon Martin R Farlow Steven Ferris Tatiana M Foroud Matthew Frosch Douglas R Galasko Paul J Gallins Mary Ganguli Marla Gearing Daniel H Geschwind Bernardino Ghetti John R Gilbert Sid Gilman Bruno Giordani Jonathan D Glass Alison M Goate Robert C Green John H Growdon Hakon Hakonarson Ronald L Hamilton John Hardy Lindy E Harrell Elizabeth Head Lawrence S Honig Matthew J Huentelman Christine M Hulette Bradley T Hyman Gail P Jarvik Gregory A Jicha Lee-Way Jin Gyungah Jun M Ilyas Kamboh Jason Karlawish Anna Karydas John S K Kauwe Jeffrey A Kaye Nancy Kennedy Ronald Kim Edward H Koo Neil W Kowall Patricia Kramer Walter A Kukull James J Lah Eric B Larson Allan I Levey Andrew P Lieberman Oscar L Lopez Kathryn L Lunetta Wendy J Mack Daniel C Marson Eden R Martin Frank Martiniuk Deborah C Mash Eliezer Masliah Wayne C McCormick Susan M McCurry Andrew N McDavid Ann C McKee Marsel Mesulam Bruce L Miller Carol A Miller Joshua W Miller Thomas J Montine John C Morris Amanda J Myers Adam C Naj Petra Nowotny Joseph E Parisi Daniel P Perl Elaine Peskind Wayne W Poon Huntington Potter Joseph F Quinn Ashok Raj Ruchita A Rajbhandary Murray Raskind Eric M Reiman Barry Reisberg Christiane Reitz John M Ringman Erik D Roberson Ekaterina Rogaeva Roger N Rosenberg Mary Sano Andrew J Saykin Julie A Schneider Lon S Schneider William Seeley Michael L Shelanski Michael A Slifer Charles D Smith Joshua A Sonnen Salvatore Spina Peter St George-Hyslop Robert A Stern Rudolph E Tanzi John Q Trojanowski Juan C Troncoso Debby W Tsuang Vivianna M Van Deerlin Badri Narayan Vardarajan Harry V Vinters Jean Paul Vonsattel Li-San Wang Sandra Weintraub Kathleen A Welsh-Bohmer Jennifer Williamson Randall L Woltjer

Neurology 2012 Jul 20;79(3):221-8. Epub 2012 Jun 20.

Department of Neuroscience, Biostatistics Unit, Mayo Clinic Florida, Jacksonville, FL, USA.

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http://dx.doi.org/10.1212/WNL.0b013e3182605801DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3398432PMC
July 2012

African ancestry and lung function in Puerto Rican children.

J Allergy Clin Immunol 2012 Jun 4;129(6):1484-90.e6. Epub 2012 May 4.

Division of Pediatric Pulmonary Medicine, Allergy and Immunology, Department of Pediatrics, Children's Hospital of Pittsburgh of UPMC, University of Pittsburgh School of Medicine, Pittsburgh, PA 15224, USA.

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http://dx.doi.org/10.1016/j.jaci.2012.03.035DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3367038PMC
June 2012

Whole exome sequencing identifies multiple, complex etiologies in an idiopathic hereditary pancreatitis kindred.

JOP 2012 May 10;13(3):258-62. Epub 2012 May 10.

Department of Medicine, University of Pittsburgh. Pittsburgh, PA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3651649PMC
May 2012

Association of CLU and PICALM variants with Alzheimer's disease.

Neurobiol Aging 2012 Mar 8;33(3):518-21. Epub 2010 Jun 8.

Department of Human Genetics, University of Pittsburgh, Pittsburgh, PA 15261, United States.

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http://dx.doi.org/10.1016/j.neurobiolaging.2010.04.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3010357PMC
March 2012

A bayesian method for evaluating and discovering disease loci associations.

PLoS One 2011 10;6(8):e22075. Epub 2011 Aug 10.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.

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http://www.dbmi.pitt.edu/sites/default/files/Jiang_3.pdf
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http://dx.plos.org/10.1371/journal.pone.0022075
Publisher Site
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0022075PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3154195PMC
December 2011

Prostaglandin E2 and IL-23 plus IL-1β differentially regulate the Th1/Th17 immune response of human CD161(+) CD4(+) memory T cells.

Clin Transl Sci 2011 Aug;4(4):268-73

Division of Gastroenterology, Hepatology, and Nutrition, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1111/j.1752-8062.2011.00300.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3170085PMC
August 2011

Common variants at MS4A4/MS4A6E, CD2AP, CD33 and EPHA1 are associated with late-onset Alzheimer's disease.

Authors:
Adam C Naj Gyungah Jun Gary W Beecham Li-San Wang Badri Narayan Vardarajan Jacqueline Buros Paul J Gallins Joseph D Buxbaum Gail P Jarvik Paul K Crane Eric B Larson Thomas D Bird Bradley F Boeve Neill R Graff-Radford Philip L De Jager Denis Evans Julie A Schneider Minerva M Carrasquillo Nilufer Ertekin-Taner Steven G Younkin Carlos Cruchaga John S K Kauwe Petra Nowotny Patricia Kramer John Hardy Matthew J Huentelman Amanda J Myers Michael M Barmada F Yesim Demirci Clinton T Baldwin Robert C Green Ekaterina Rogaeva Peter St George-Hyslop Steven E Arnold Robert Barber Thomas Beach Eileen H Bigio James D Bowen Adam Boxer James R Burke Nigel J Cairns Chris S Carlson Regina M Carney Steven L Carroll Helena C Chui David G Clark Jason Corneveaux Carl W Cotman Jeffrey L Cummings Charles DeCarli Steven T DeKosky Ramon Diaz-Arrastia Malcolm Dick Dennis W Dickson William G Ellis Kelley M Faber Kenneth B Fallon Martin R Farlow Steven Ferris Matthew P Frosch Douglas R Galasko Mary Ganguli Marla Gearing Daniel H Geschwind Bernardino Ghetti John R Gilbert Sid Gilman Bruno Giordani Jonathan D Glass John H Growdon Ronald L Hamilton Lindy E Harrell Elizabeth Head Lawrence S Honig Christine M Hulette Bradley T Hyman Gregory A Jicha Lee-Way Jin Nancy Johnson Jason Karlawish Anna Karydas Jeffrey A Kaye Ronald Kim Edward H Koo Neil W Kowall James J Lah Allan I Levey Andrew P Lieberman Oscar L Lopez Wendy J Mack Daniel C Marson Frank Martiniuk Deborah C Mash Eliezer Masliah Wayne C McCormick Susan M McCurry Andrew N McDavid Ann C McKee Marsel Mesulam Bruce L Miller Carol A Miller Joshua W Miller Joseph E Parisi Daniel P Perl Elaine Peskind Ronald C Petersen Wayne W Poon Joseph F Quinn Ruchita A Rajbhandary Murray Raskind Barry Reisberg John M Ringman Erik D Roberson Roger N Rosenberg Mary Sano Lon S Schneider William Seeley Michael L Shelanski Michael A Slifer Charles D Smith Joshua A Sonnen Salvatore Spina Robert A Stern Rudolph E Tanzi John Q Trojanowski Juan C Troncoso Vivianna M Van Deerlin Harry V Vinters Jean Paul Vonsattel Sandra Weintraub Kathleen A Welsh-Bohmer Jennifer Williamson Randall L Woltjer Laura B Cantwell Beth A Dombroski Duane Beekly Kathryn L Lunetta Eden R Martin M Ilyas Kamboh Andrew J Saykin Eric M Reiman David A Bennett John C Morris Thomas J Montine Alison M Goate Deborah Blacker Debby W Tsuang Hakon Hakonarson Walter A Kukull Tatiana M Foroud Jonathan L Haines Richard Mayeux Margaret A Pericak-Vance Lindsay A Farrer Gerard D Schellenberg

Nat Genet 2011 May 3;43(5):436-41. Epub 2011 Apr 3.

The John P. Hussman Institute for Human Genomics, University of Miami, Miami, Florida, USA.

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http://dx.doi.org/10.1038/ng.801DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3090745PMC
May 2011

Learning genetic epistasis using Bayesian network scoring criteria.

BMC Bioinformatics 2011 Mar 31;12:89. Epub 2011 Mar 31.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1186/1471-2105-12-89DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3080825PMC
March 2011

An efficient bayesian method for predicting clinical outcomes from genome-wide data.

AMIA Annu Symp Proc 2010 Nov 13;2010:127-31. Epub 2010 Nov 13.

Department of Biomedical Informatics.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041321PMC
November 2010

A fast algorithm for learning epistatic genomic relationships.

AMIA Annu Symp Proc 2010 Nov 13;2010:341-5. Epub 2010 Nov 13.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041370PMC
November 2010

Pooling-based genome-wide association study implicates gamma-glutamyltransferase 1 (GGT1) gene in pancreatic carcinogenesis.

Pancreatology 2010 17;10(2-3):194-200. Epub 2010 May 17.

Department of Epidemiology, Graduate School of Public Health, University of Pittsburgh, and University of Pittsburgh Cancer Institute, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1159/000236023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2899150PMC
September 2010

Identifying genetic interactions in genome-wide data using Bayesian networks.

Genet Epidemiol 2010 Sep;34(6):575-81

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1002/gepi.20514DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3931553PMC
September 2010

A novel locus for familial migraine on Xp22.

Headache 2010 Jun 20;50(6):955-62. Epub 2010 Apr 20.

Department of Neurology, KH Göttlicher Heiland, Vienna, Austria.

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http://dx.doi.org/10.1111/j.1526-4610.2010.01673.xDOI Listing
June 2010

Comprehensive analysis of HLA-G: implications for recurrent spontaneous abortion.

Reprod Sci 2010 Apr;17(4):331-8

Department of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1177/1933719109356802DOI Listing
April 2010

Increasing incidence of acute pancreatitis at an American pediatric tertiary care center: is greater awareness among physicians responsible?

Pancreas 2010 Jan;39(1):5-8

Division of Pediatric Gastroenterology and Nutrition, Montreal Children's Hospital, McGill University Health Centre, Montreal, Quebec, Canada.

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http://dx.doi.org/10.1097/MPA.0b013e3181baac47DOI Listing
January 2010

Physical activity levels in American-Indian adults: the Strong Heart Family Study.

Am J Prev Med 2009 Dec;37(6):481-7

Department of Epidemiology, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA.

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http://dx.doi.org/10.1016/j.amepre.2009.07.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2828819PMC
December 2009

A Bayesian method for identifying genetic interactions.

AMIA Annu Symp Proc 2009 Nov 14;2009:673-7. Epub 2009 Nov 14.

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2815434PMC
November 2009

Genetic variation in C-reactive protein (CRP) gene may be associated with risk of systemic lupus erythematosus and CRP concentrations.

J Rheumatol 2008 Nov 15;35(11):2171-8. Epub 2008 Sep 15.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2582591PMC
http://dx.doi.org/10.3899/jrheum.080262DOI Listing
November 2008

Pathways to injury in chronic pancreatitis: decoding the role of the high-risk SPINK1 N34S haplotype using meta-analysis.

PLoS One 2008 Apr 16;3(4):e2003. Epub 2008 Apr 16.

Division of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0002003PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2289874PMC
April 2008

The PPARgamma Pro12Ala polymorphism is not associated with body mass index or waist circumference among Hispanics from Colorado.

Ann Nutr Metab 2007 18;51(3):252-7. Epub 2007 Jun 18.

Department of Health and Exercise Science, Colorado State University, Fort Collins, CO 80523, USA.

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https://www.karger.com/Article/FullText/104145
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http://dx.doi.org/10.1159/000104145DOI Listing
October 2007

The serotonin transporter: sequence variation in Macaca fascicularis and its relationship to dominance.

Behav Genet 2007 Sep 29;37(5):678-96. Epub 2007 Jun 29.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, A300 Crabtree Hall, 130 De Soto Street, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1007/s10519-007-9162-3DOI Listing
September 2007

A genome-wide association study identifies IL23R as an inflammatory bowel disease gene.

Science 2006 Dec 26;314(5804):1461-3. Epub 2006 Oct 26.

Division of Gastroenterology, Hepatology and Nutrition, Department of Medicine, School of Medicine, University of Pittsburgh, University of Pittsburgh Medical Center Presbyterian, Mezzanine Level, C-Wing, 200 Lothrop Street, Pittsburgh, PA 15213, USA.

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http://dx.doi.org/10.1126/science.1135245DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4410764PMC
December 2006

The MCP-1 -2518 A/G polymorphism is not a susceptibility factor for chronic pancreatitis.

Pancreatology 2006 19;6(4):297-300. Epub 2006 Apr 19.

Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1159/000092692DOI Listing
October 2006

Keratin 8 mutations are not associated with familial, sporadic and alcoholic pancreatitis in a population from the United States.

Pancreatology 2006 1;6(1-2):103-8. Epub 2005 Dec 1.

Department of Medicine, Division of Gastroenterology, University of Pittsburgh, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1159/000090029DOI Listing
June 2006

Evaluating disorders with a complex genetics basis. the future roles of meta-analysis and systems biology.

Dig Dis Sci 2005 Dec;50(12):2195-202

Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, USA.

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http://dx.doi.org/10.1007/s10620-005-3033-7DOI Listing
December 2005

Challenges of examining complex genetic disorders like GERD.

J Pediatr Gastroenterol Nutr 2005 Sep;41 Suppl 1:S17-9

University of Pittsburgh School of Medicine, Pittsburgh, USA.

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http://dx.doi.org/10.1097/01.scs.0000180290.81859.a2DOI Listing
September 2005

Is the monocyte chemotactic protein-1 -2518 G allele a risk factor for severe acute pancreatitis?

Clin Gastroenterol Hepatol 2005 May;3(5):475-81

Department of Medicine, University of Pittsburgh, Pennsylvania 15213, USA.

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http://dx.doi.org/10.1016/s1542-3565(05)00163-1DOI Listing
May 2005

Transforming growth factor-beta1, interleukin-10 and interferon-gamma cytokine polymorphisms in patients with hereditary, familial and sporadic chronic pancreatitis.

Pancreatology 2004 16;4(6):490-4. Epub 2004 Aug 16.

Department of Medicine, University of Pittsburgh, Pittsburgh, PA 15101, USA.

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http://dx.doi.org/10.1159/000080245DOI Listing
April 2005

The functional angiotensin converting enzyme gene I/D polymorphism does not alter susceptibility to chronic pancreatitis.

JOP 2004 Nov 10;5(6):457-63. Epub 2004 Nov 10.

Department of Medicine, Division of Gastroenterology, and the Center for Genomic Sciences, University of Pittsburgh. Pittsburgh, PA, USA.

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November 2004

A genome scan in 260 inflammatory bowel disease-affected relative pairs.

Inflamm Bowel Dis 2004 Sep;10(5):513-20

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pennsylvania 15261, USA.

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http://dx.doi.org/10.1097/00054725-200409000-00004DOI Listing
September 2004

Genetic analysis of the glutathione s-transferase genes MGST1, GSTM3, GSTT1, and GSTM1 in patients with hereditary pancreatitis.

J Gastroenterol 2004 Aug;39(8):783-7

Department of Medicine, Division of Gastroenterology, University of Pittsburgh, 571 Scaife Hall, 3550 Terrace Street, Pittsburgh, PA 15213, USA.

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http://dx.doi.org/10.1007/s00535-004-1389-7DOI Listing
August 2004

Genetic variation in uncoupling protein 3 is associated with dietary intake and body composition in females.

Metabolism 2004 Apr;53(4):458-64

Department of Human Genetics, University of Pittsburgh Graduate School of Public Health, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1016/j.metabol.2003.11.019DOI Listing
April 2004

A genome scan in 260 inflammatory bowel disease-affected relative pairs.

Inflamm Bowel Dis 2004 Jan;10(1):15-22

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1097/00054725-200401000-00002DOI Listing
January 2004

Stability of exploratory multivariate data modeling in longitudinal data.

BMC Genet 2003 Dec 31;4 Suppl 1:S38. Epub 2003 Dec 31.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1186/1471-2156-4-S1-S38DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1866473PMC
December 2003

Genome-wide homozygosity mapping localizes a gene for autosomal recessive non-progressive infantile ataxia to 20q11-q13.

Hum Genet 2003 Aug 17;113(3):293-5. Epub 2003 Jun 17.

Department of Audiology, Bispebjerg Hospital, Bispebjerg Bakke 23, DK-2400, Copenhagen NV, Denmark.

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http://dx.doi.org/10.1007/s00439-003-0967-8DOI Listing
August 2003

African American hypertensive nephropathy maps to a new locus on chromosome 9q31-q32.

Am J Hum Genet 2003 Aug 1;73(2):420-9. Epub 2003 Jul 1.

Department of Pediatrics, Children's Hospital of Pittsburgh, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1180380PMC
http://dx.doi.org/10.1086/377184DOI Listing
August 2003

Limited contribution of the SPINK1 N34S mutation to the risk and severity of alcoholic chronic pancreatitis: a report from the United States.

Dig Dis Sci 2003 Jun;48(6):1110-5

Department of Medicine, Division of Gastroenterology, Center for Genomic Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, USA.

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http://dx.doi.org/10.1023/a:1023768829772DOI Listing
June 2003

Variation in the FABP2 promoter alters transcriptional activity and is associated with body composition and plasma lipid levels.

Hum Genet 2003 May 13;112(5-6):610-6. Epub 2003 Mar 13.

Department of Human Genetics, University of Pittsburgh Graduate School of Public Health, Pittsburgh, Pa., USA.

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http://dx.doi.org/10.1007/s00439-003-0937-1DOI Listing
May 2003

Evidence for an inflammatory bowel disease locus on chromosome 3p26: linkage, transmission/disequilibrium and partitioning of linkage.

Hum Mol Genet 2002 Oct;11(21):2599-606

Division of Gastroenterology, Hepatology and Nutrition, Department of Medicine, School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.

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http://dx.doi.org/10.1093/hmg/11.21.2599DOI Listing
October 2002

Investigation of oxidized LDL-receptor 1 (OLR1) as the candidate gene for Alzheimer's disease on chromosome 12.

Hum Genet 2002 Oct 16;111(4-5):443-51. Epub 2002 Aug 16.

Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, 130 DeSoto Street, Pittsburgh, PA 15261, USA.

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http://dx.doi.org/10.1007/s00439-002-0802-7DOI Listing
October 2002

Perinuclear neutrophil antibodies are not markers for genetic susceptibility or indicators of genetic heterogeneity in familial ulcerative colitis.

Am J Gastroenterol 2002 Sep;97(9):2343-9

Department of Gastroenterology, The Cleveland Clinic Foundation, Ohio 44195, USA.

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http://dx.doi.org/10.1111/j.1572-0241.2002.05989.xDOI Listing
September 2002

Genetics of gastroesophageal reflux disease: a review.

J Pediatr Gastroenterol Nutr 2002 May;34(5):506-10

Pediatric Gastroenterology, Children's Hospital of Pittsburgh, PA 15213-2583, USA.

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http://dx.doi.org/10.1097/00005176-200205000-00005DOI Listing
May 2002