Melissa Kramer

Melissa Kramer

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Melissa Kramer

Melissa Kramer

Publications by authors named "Melissa Kramer"

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42Publications

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Functionalized triazines as potent HCV entry inhibitors.

Bioorg Med Chem Lett 2017 02 18;27(4):1089-1093. Epub 2016 Dec 18.

Department of Discovery Chemistry, Bristol-Myers Squibb Research and Development, 5 Research Parkway, Wallingford, CT 06492, United States.

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http://dx.doi.org/10.1016/j.bmcl.2016.12.038DOI Listing
February 2017

The combination of rapamycin and resveratrol blocks autophagy and induces apoptosis in breast cancer cells.

J Cell Biochem 2015 Mar;116(3):450-7

Department of Biology, Stern College for Women of Yeshiva University, New York, New York.

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http://dx.doi.org/10.1002/jcb.24997DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4491987PMC
March 2015

Validation and assessment of variant calling pipelines for next-generation sequencing.

Hum Genomics 2014 Jul 30;8:14. Epub 2014 Jul 30.

Department of Psychiatry and Behavioral Sciences, Johns Hopkins University, Baltimore, MD 21205, USA.

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http://dx.doi.org/10.1186/1479-7364-8-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4129436PMC
July 2014

FamAnn: an automated variant annotation pipeline to facilitate target discovery for family-based sequencing studies.

Bioinformatics 2014 04 5;30(8):1175-1176. Epub 2014 Jan 5.

Stanley Institute for Cognitive Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA, Department of Biological Chemistry, Howard Hughes Medical Institute, University of California, Los Angeles, CA 90095, USA and Department of Molecular, Cellular, and Developmental Biology, University of California, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1093/bioinformatics/btt749DOI Listing
April 2014

A hybrid likelihood model for sequence-based disease association studies.

PLoS Genet 2013 24;9(1):e1003224. Epub 2013 Jan 24.

Department of Biomedical Engineering and Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1371/journal.pgen.1003224DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3554549PMC
May 2013

Establishing the baseline level of repetitive element expression in the human cortex.

BMC Genomics 2011 Oct 10;12:495. Epub 2011 Oct 10.

Department of Biostatistics and Computational Biology, Dana-Farber CancerInstitute, 450 Brookline Ave, Boston, 02115, USA.

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http://dx.doi.org/10.1186/1471-2164-12-495DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3207997PMC
October 2011

A comparative analysis of exome capture.

Genome Biol 2011 Sep 29;12(9):R97. Epub 2011 Sep 29.

Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1186/gb-2011-12-9-r97DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308060PMC
September 2011

Effects of genetic variants of human P450 oxidoreductase on catalysis by CYP2D6 in vitro.

Pharmacogenet Genomics 2010 Nov;20(11):677-86

Department of Pediatrics, University of California, San Francisco, California 94143-0978, USA.

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http://dx.doi.org/10.1097/FPC.0b013e32833f4f9bDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5708132PMC
November 2010

Enhancing the credibility of decisions based on scientific conclusions: transparency is imperative.

Toxicol Sci 2010 Jul 2;116(1):5-7. Epub 2010 Apr 2.

Department of Pesticide Regulation, California Environmental Protection Agency, Sacramento, California 95812, USA.

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http://dx.doi.org/10.1093/toxsci/kfq102DOI Listing
July 2010

The U.S. Environmental Protection Agency strategic plan for evaluating the toxicity of chemicals.

J Toxicol Environ Health B Crit Rev 2010 Feb;13(2-4):139-62

Office of Children's Health Protection and Environmental Education, US Environmental Protection Agency.

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http://dx.doi.org/10.1080/10937404.2010.483178DOI Listing
February 2010

The B73 maize genome: complexity, diversity, and dynamics.

Authors:
Patrick S Schnable Doreen Ware Robert S Fulton Joshua C Stein Fusheng Wei Shiran Pasternak Chengzhi Liang Jianwei Zhang Lucinda Fulton Tina A Graves Patrick Minx Amy Denise Reily Laura Courtney Scott S Kruchowski Chad Tomlinson Cindy Strong Kim Delehaunty Catrina Fronick Bill Courtney Susan M Rock Eddie Belter Feiyu Du Kyung Kim Rachel M Abbott Marc Cotton Andy Levy Pamela Marchetto Kerri Ochoa Stephanie M Jackson Barbara Gillam Weizu Chen Le Yan Jamey Higginbotham Marco Cardenas Jason Waligorski Elizabeth Applebaum Lindsey Phelps Jason Falcone Krishna Kanchi Thynn Thane Adam Scimone Nay Thane Jessica Henke Tom Wang Jessica Ruppert Neha Shah Kelsi Rotter Jennifer Hodges Elizabeth Ingenthron Matt Cordes Sara Kohlberg Jennifer Sgro Brandon Delgado Kelly Mead Asif Chinwalla Shawn Leonard Kevin Crouse Kristi Collura Dave Kudrna Jennifer Currie Ruifeng He Angelina Angelova Shanmugam Rajasekar Teri Mueller Rene Lomeli Gabriel Scara Ara Ko Krista Delaney Marina Wissotski Georgina Lopez David Campos Michele Braidotti Elizabeth Ashley Wolfgang Golser HyeRan Kim Seunghee Lee Jinke Lin Zeljko Dujmic Woojin Kim Jayson Talag Andrea Zuccolo Chuanzhu Fan Aswathy Sebastian Melissa Kramer Lori Spiegel Lidia Nascimento Theresa Zutavern Beth Miller Claude Ambroise Stephanie Muller Will Spooner Apurva Narechania Liya Ren Sharon Wei Sunita Kumari Ben Faga Michael J Levy Linda McMahan Peter Van Buren Matthew W Vaughn Kai Ying Cheng-Ting Yeh Scott J Emrich Yi Jia Ananth Kalyanaraman An-Ping Hsia W Brad Barbazuk Regina S Baucom Thomas P Brutnell Nicholas C Carpita Cristian Chaparro Jer-Ming Chia Jean-Marc Deragon James C Estill Yan Fu Jeffrey A Jeddeloh Yujun Han Hyeran Lee Pinghua Li Damon R Lisch Sanzhen Liu Zhijie Liu Dawn Holligan Nagel Maureen C McCann Phillip SanMiguel Alan M Myers Dan Nettleton John Nguyen Bryan W Penning Lalit Ponnala Kevin L Schneider David C Schwartz Anupma Sharma Carol Soderlund Nathan M Springer Qi Sun Hao Wang Michael Waterman Richard Westerman Thomas K Wolfgruber Lixing Yang Yeisoo Yu Lifang Zhang Shiguo Zhou Qihui Zhu Jeffrey L Bennetzen R Kelly Dawe Jiming Jiang Ning Jiang Gernot G Presting Susan R Wessler Srinivas Aluru Robert A Martienssen Sandra W Clifton W Richard McCombie Rod A Wing Richard K Wilson

Science 2009 Nov;326(5956):1112-5

Center for Plant Genomics, Iowa State University, Ames, IA 50011, USA.

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http://www.dawelab.org/wp-content/uploads/2011/03/schnable-2
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http://www.sciencemag.org/cgi/doi/10.1126/science.1178534
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http://dx.doi.org/10.1126/science.1178534DOI Listing
November 2009

Novel CYP2C9 promoter variants and assessment of their impact on gene expression.

Mol Pharmacol 2008 Jun 29;73(6):1751-60. Epub 2008 Feb 29.

Department of Pediatrics, Medical College of Wisconsin, Milwaukee WI 53226, USA.

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http://dx.doi.org/10.1124/mol.107.044149DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2413059PMC
June 2008

Studying cytochrome P450 kinetics in drug metabolism.

Expert Opin Drug Metab Toxicol 2008 May;4(5):591-603

University of Minnesota, College of Pharmacy, Department of Experimental and Clinical Pharmacology, 7-115B Weaver-Densford Hall, 308 Harvard Street SE, Minneapolis, MN 55455, USA.

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http://www.tandfonline.com/doi/full/10.1517/17425255.4.5.591
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http://dx.doi.org/10.1517/17425255.4.5.591 DOI Listing
May 2008

The Rice Annotation Project Database (RAP-DB): 2008 update.

Nucleic Acids Res 2008 Jan 17;36(Database issue):D1028-33. Epub 2007 Dec 17.

National Institute of Agrobiological Sciences, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1093/nar/gkm978DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238920PMC
January 2008

Genome-wide in situ exon capture for selective resequencing.

Nat Genet 2007 Dec 4;39(12):1522-7. Epub 2007 Nov 4.

Howard Hughes Medical Institute, Watson School of Biological Sciences, Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, New York 11724, USA.

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http://rulai.cshl.edu/xuan/publication/hybridSelectionSolexa
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http://www.nature.com/doifinder/10.1038/ng.2007.42
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http://dx.doi.org/10.1038/ng.2007.42DOI Listing
December 2007

In vivo analysis of chronic phosphodiesterase-5 inhibition with sildenafil in penile erectile tissues: no tachyphylaxis effect.

J Urol 2005 Oct;174(4 Pt 1):1493-6

Department of Urology and Division of Cardiology, The Johns Hopkins Hospital, Baltimore, Maryland 21287, USA.

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http://dx.doi.org/10.1097/01.ju.0000173006.47623.2cDOI Listing
October 2005

Inactivation of phosphorylated endothelial nitric oxide synthase (Ser-1177) by O-GlcNAc in diabetes-associated erectile dysfunction.

Proc Natl Acad Sci U S A 2005 Aug 5;102(33):11870-5. Epub 2005 Aug 5.

Department of Urology, The Johns Hopkins Hospital, 600 North Wolfe Street, Baltimore, MD 21287, USA.

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http://dx.doi.org/10.1073/pnas.0502488102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1187969PMC
August 2005

Nonimmunosuppressant immunophilin ligand GPI-1046 does not promote in vitro growth of prostate cancer cells.

Urology 2005 May;65(5):1003-7

Department of Urology, James Buchanan Brady Urological Institute, Johns Hopkins Medical Institutions, Baltimore, Maryland 21287-2411, USA.

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http://dx.doi.org/10.1016/j.urology.2004.11.033DOI Listing
May 2005

Age-related changes in phosphorylation of endothelial nitric oxide synthase in the rat penis.

J Sex Med 2005 May;2(3):347-55; discussion 355-7

Johns Hopkins Hospital, Brady Urological Institute, Baltimore, MD 21287, USA.

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http://dx.doi.org/10.1111/j.1743-6109.2005.20349.xDOI Listing
May 2005

TrkB receptor signaling regulates developmental death dynamics, but not final number, of retinal ganglion cells.

J Neurosci 2003 Nov;23(31):10137-45

Department of Pharmacology and Experimental Therapeutics, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.

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November 2003

Evolutionary implications of developmental instability in parthenogenetic drosophila mercatorum. I. Comparison of several strains with different genotypes.

Evol Dev 2002 May-Jun;4(3):223-33

Department of Biology, Washington University, St Louis, MO 63130, USA.

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December 2002