Publications by authors named "Matthew R Laird"

17Publications

IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets.

Nucleic Acids Res 2017 07;45(W1):W30-W35

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.

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http://dx.doi.org/10.1093/nar/gkx343DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5570257PMC
July 2017

PSORTdb: expanding the bacteria and archaea protein subcellular localization database to better reflect diversity in cell envelope structures.

Nucleic Acids Res 2016 Jan 23;44(D1):D663-8. Epub 2015 Nov 23.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada

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http://dx.doi.org/10.1093/nar/gkv1271DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702898PMC
January 2016

GenomeD3Plot: a library for rich, interactive visualizations of genomic data in web applications.

Bioinformatics 2015 Oct 20;31(20):3348-9. Epub 2015 Jun 20.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6 and.

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http://dx.doi.org/10.1093/bioinformatics/btv376DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4595901PMC
October 2015

IslandViewer update: Improved genomic island discovery and visualization.

Nucleic Acids Res 2013 Jul 15;41(Web Server issue):W129-32. Epub 2013 May 15.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada.

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http://dx.doi.org/10.1093/nar/gkt394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3692065PMC
July 2013

OrtholugeDB: a bacterial and archaeal orthology resource for improved comparative genomic analysis.

Nucleic Acids Res 2013 Jan 29;41(Database issue):D366-76. Epub 2012 Nov 29.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada.

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http://dx.doi.org/10.1093/nar/gks1241DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531125PMC
January 2013

InnateDB: systems biology of innate immunity and beyond--recent updates and continuing curation.

Nucleic Acids Res 2013 Jan 24;41(Database issue):D1228-33. Epub 2012 Nov 24.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, V5A1S6, Canada.

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http://dx.doi.org/10.1093/nar/gks1147DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531080PMC
January 2013

MicrobeDB: a locally maintainable database of microbial genomic sequences.

Bioinformatics 2012 Jul 9;28(14):1947-8. Epub 2012 May 9.

Department of Biochemistry & Molecular Biology, Dalhousie University, Halifax, Nova Scotia, Canada.

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http://dx.doi.org/10.1093/bioinformatics/bts273DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3389766PMC
July 2012

PSORTdb--an expanded, auto-updated, user-friendly protein subcellular localization database for Bacteria and Archaea.

Nucleic Acids Res 2011 Jan 10;39(Database issue):D241-4. Epub 2010 Nov 10.

Department of Molecular Biology & Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gkq1093DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013690PMC
January 2011

Improving the specificity of high-throughput ortholog prediction.

BMC Bioinformatics 2006 May 28;7:270. Epub 2006 May 28.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/1471-2105-7-270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1524997PMC
May 2006

PSORTdb: a protein subcellular localization database for bacteria.

Nucleic Acids Res 2005 Jan;33(Database issue):D164-8

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada V5A 1S6.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gki027DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC539981PMC
January 2005