Matthew P Kent

Matthew P Kent

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Matthew P Kent

Matthew P Kent

Publications by authors named "Matthew P Kent"

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A genetic linkage map for the salmon louse (Lepeophtheirus salmonis): evidence for high male:female and inter-familial recombination rate differences.

Mol Genet Genomics 2019 Apr 20;294(2):343-363. Epub 2018 Nov 20.

Department of Biology, Centre for Biomedical Research, University of Victoria, 3800 Finnerty Road, Victoria, BC, V8W 3N5, Canada.

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http://dx.doi.org/10.1007/s00438-018-1513-7DOI Listing
April 2019

A 200K SNP chip reveals a novel Pacific salmon louse genotype linked to differential efficacy of emamectin benzoate.

Mar Genomics 2018 Jul 16;40:45-57. Epub 2018 Apr 16.

Department of Biology, University of Victoria, Victoria V8W 2Y2, BC, Canada; Centre for Biomedical Research, University of Victoria, Victoria, BC V8W 3N5, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.margen.2018.03.005DOI Listing
July 2018

Genomic signatures of parasite-driven natural selection in north European Atlantic salmon (Salmo salar).

Mar Genomics 2018 Jun 10;39:26-38. Epub 2018 Apr 10.

Department of Biology, University of Turku, Turku, Finland; Department of Biosciences, University of Helsinki, Helsinki, Finland; Institute of Biotechnology, University of Helsinki, Helsinki, Finland. Electronic address:

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http://dx.doi.org/10.1016/j.margen.2018.01.001DOI Listing
June 2018

Fine mapping of a QTL affecting levels of skatole on pig chromosome 7.

BMC Genet 2017 10 11;18(1):85. Epub 2017 Oct 11.

Topigs Norsvin, Storhamargata 44, 2317, Hamar, Norway.

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http://dx.doi.org/10.1186/s12863-017-0549-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5637327PMC
October 2017

Genetic differences between wild and hatchery-bred brown trout ( L.) in single nucleotide polymorphisms linked to selective traits.

Ecol Evol 2017 07 30;7(13):4963-4972. Epub 2017 May 30.

Department of Animal and Aquacultural Sciences Norwegian University of Life Sciences Ås Norway.

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http://dx.doi.org/10.1002/ece3.3070DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5496558PMC
July 2017

Two adjacent inversions maintain genomic differentiation between migratory and stationary ecotypes of Atlantic cod.

Mol Ecol 2016 05 20;25(10):2130-43. Epub 2016 Apr 20.

Centre for Integrative Genetics (CIGENE), Department of Animal and Aquaculture Sciences (IHA), Norwegian University of Life Sciences (NMBU), PO Box 5003, Ås, N-1430, Norway.

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http://dx.doi.org/10.1111/mec.13592DOI Listing
May 2016

"Islands of Divergence" in the Atlantic Cod Genome Represent Polymorphic Chromosomal Rearrangements.

Genome Biol Evol 2016 Apr 11;8(4):1012-22. Epub 2016 Apr 11.

Institute of Marine Research, Flødevigen, Norway Department of Natural Sciences, Faculty of Engineering and Science, University of Agder, Kristiansand, Norway Centre for Ecological and Evolutionary Syntheses, Department of Biosciences, University of Oslo, Norway.

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http://dx.doi.org/10.1093/gbe/evw057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4860689PMC
April 2016

Genome-wide SNP analysis reveals a genetic basis for sea-age variation in a wild population of Atlantic salmon (Salmo salar).

Mol Ecol 2014 Jul;23(14):3452-68

Division of Genetics and Physiology, Department of Biology, University of Turku, Itäinen Pitkäkatu 4, Turku, FIN-20520, Finland.

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http://dx.doi.org/10.1111/mec.12832DOI Listing
July 2014

Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays.

Mar Genomics 2014 Jun 2;15:5-6. Epub 2014 Apr 2.

Institute of Oceanology PAS, 81-712 Sopot, Poland. Electronic address:

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http://dx.doi.org/10.1016/j.margen.2014.03.003DOI Listing
June 2014

Spatial and temporal genetic structure of a river-resident Atlantic salmon (Salmo salar) after millennia of isolation.

Ecol Evol 2014 May 27;4(9):1538-54. Epub 2014 Mar 27.

Norwegian Institute for Nature Research (NINA) PO Box 5685, No-7485, Trondheim, Norway.

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http://dx.doi.org/10.1002/ece3.1040DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4063457PMC
May 2014

Landscape genomics in Atlantic salmon (Salmo salar): searching for gene-environment interactions driving local adaptation.

Evolution 2013 Dec 22;67(12):3469-87. Epub 2013 May 22.

Département de Biologie, Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, 1030 avenue de la Médecine, Québec, Québec G1V 0A6, Canada.

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http://dx.doi.org/10.1111/evo.12139DOI Listing
December 2013

Genotyping of two populations of Southern Baltic Sea trout Salmo trutta m. trutta using an Atlantic salmon derived SNP-array.

Mar Genomics 2013 Mar 6;9:25-32. Epub 2012 Nov 6.

National Marine Fisheries Research Institute, Gdynia, ul. Kołłątaja 1, 81-332, Gdynia, Poland.

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http://dx.doi.org/10.1016/j.margen.2012.08.001DOI Listing
March 2013

SNP-array reveals genome-wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar).

Mol Ecol 2013 Feb 12;22(3):532-51. Epub 2012 Sep 12.

Département de Biologie, Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, Canada.

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http://doi.wiley.com/10.1111/mec.12003
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http://dx.doi.org/10.1111/mec.12003DOI Listing
February 2013

A missense mutation in growth differentiation factor 9 (GDF9) is strongly associated with litter size in sheep.

BMC Genet 2013 Jan 2;14. Epub 2013 Jan 2.

Centre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences (IHA), Norwegian University of Life Sciences (UMB), PO Box 5003, N-1432 Ås, Norway.

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http://dx.doi.org/10.1186/1471-2156-14-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3546915PMC
January 2013

Chromosomal differences between European and North American Atlantic salmon discovered by linkage mapping and supported by fluorescence in situ hybridization analysis.

BMC Genomics 2012 Aug 28;13:432. Epub 2012 Aug 28.

Centre of Integrative Genetics and Department of Animal and Aquacultural Sciences, Norwegian University of Life Sciences, P,O, Box 5003,, 1430, Ås, Norway.

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http://dx.doi.org/10.1186/1471-2164-13-432DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3495403PMC
August 2012

A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns.

BMC Genomics 2011 Dec 19;12:615. Epub 2011 Dec 19.

Centre for Integrative Genetics and Department of Animal and Aquacultural Sciences, Norwegian University of Life Sciences, N-1432, Ås, Norway.

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http://dx.doi.org/10.1186/1471-2164-12-615DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3261913PMC
December 2011

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Science 2009 Apr;324(5926):528-32

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http://dx.doi.org/10.1126/science.1167936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735092PMC
April 2009

Escherichia coli O157 prevalence and enumeration of aerobic bacteria, Enterobacteriaceae, and Escherichia coli O157 at various steps in commercial beef processing plants.

J Food Prot 2004 Apr;67(4):658-65

Roman L. Hruska U.S. Meat Animal Research Center, Agricultural Research Service, U.S. Department of Agriculture, Clay Center, Nebraska 68933-0166, USA.

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http://dx.doi.org/10.4315/0362-028x-67.4.658DOI Listing
April 2004

Protocol for evaluating the efficacy of cetylpyridinium chloride as a beef hide intervention.

J Food Prot 2004 Feb;67(2):303-9

US Department of Agriculture, Agricultural Research Service, Roman L. Hruska US Meat Animal Research Center, Clay Center, Nebraska 68933-0166, USA.

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http://dx.doi.org/10.4315/0362-028x-67.2.303DOI Listing
February 2004

Meat tenderness and muscle growth: is there any relationship?

Meat Sci 2002 Nov;62(3):345-52

US Meat Animal Research Center, ARS, USDA, PO Box 166, Spur 18-D, Clay Center, NE 68933-0166, USA.

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November 2002