Publications by authors named "Matthew J Oberley"

26Publications

Levocarnitine does not impair chemotherapy cytotoxicity against acute lymphoblastic leukemia.

Leuk Lymphoma 2020 02 16;61(2):420-428. Epub 2019 Sep 16.

Division of Pediatric Endocrinology, UCLA Children's Discovery and Innovation Institute, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/10428194.2019.1666379DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7305023PMC
February 2020

Myeloid lineage switch following chimeric antigen receptor T-cell therapy in a patient with TCF3-ZNF384 fusion-positive B-lymphoblastic leukemia.

Pediatr Blood Cancer 2018 09 24;65(9):e27265. Epub 2018 May 24.

Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles, Keck School of Medicine, University of Southern California, Los Angeles, California.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1002/pbc.27265
Publisher Site
http://dx.doi.org/10.1002/pbc.27265DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469918PMC
September 2018

Therapy for children and adults with mixed phenotype acute leukemia: a systematic review and meta-analysis.

Leukemia 2018 07 27;32(7):1515-1528. Epub 2018 Feb 27.

Children's Center for Cancer and Blood Diseases, Children's Hospital Los Angeles, Los Angeles, CA, USA.

View Article

Download full-text PDF

Source
http://www.nature.com/articles/s41375-018-0058-4
Publisher Site
http://dx.doi.org/10.1038/s41375-018-0058-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508489PMC
July 2018

Predictors of hepatotoxicity and pancreatitis in children and adolescents with acute lymphoblastic leukemia treated according to contemporary regimens.

Pediatr Blood Cancer 2018 03 8;65(3). Epub 2017 Dec 8.

Division of Hematology, Oncology, & BMT, Children's Hospital Los Angeles, Los Angeles, California.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/pbc.26891DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7522002PMC
March 2018

Adipocytes Sequester and Metabolize the Chemotherapeutic Daunorubicin.

Mol Cancer Res 2017 12 8;15(12):1704-1713. Epub 2017 Nov 8.

Diabetes and Obesity Program, Center for Endocrinology, Diabetes and Metabolism, Children's Hospital Los Angeles, Los Angeles, California.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1541-7786.MCR-17-0338DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5726435PMC
December 2017

A neoplasm with FIP1L1-PDGFRA fusion presenting as pediatric T-cell lymphoblastic leukemia/lymphoma without eosinophilia.

Cancer Genet 2017 Oct 3;216-217:91-99. Epub 2017 Aug 3.

Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles, Los Angeles, California. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cancergen.2017.07.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469920PMC
October 2017

Association of clinical trial enrollment and survival using contemporary therapy for pediatric acute lymphoblastic leukemia.

Pediatr Blood Cancer 2018 Feb 6;65(2). Epub 2017 Sep 6.

Children's Center for Cancer and Blood Diseases, Children's Hospital Los Angeles, Los Angeles, California.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/pbc.26788DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7553364PMC
February 2018

Clinical Significance of Isolated Myeloperoxidase Expression in Pediatric B-Lymphoblastic Leukemia.

Am J Clin Pathol 2017 04;147(4):374-381

Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles, Keck School of Medicine, University of Southern California, 4650 Sunset Blvd., Los Angeles, CA

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/ajcp/aqx021DOI Listing
April 2017

Pure erythroid leukemia presenting in a HIV-positive patient.

Clin Lymphoma Myeloma Leuk 2014 Feb 1;14(1):e35-8. Epub 2013 Oct 1.

Department of Pathology and Laboratory Medicine, University of Wisconsin, Madison, WI.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.clml.2013.09.017DOI Listing
February 2014

Immunohistochemical evaluation of MYC expression in mantle cell lymphoma.

Histopathology 2013 Oct 8;63(4):499-508. Epub 2013 Aug 8.

Department of Pathology and Laboratory Medicine, University of Wisconsin, Madison, WI, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/his.12207DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3871984PMC
October 2013

Laboratory testing for cobalamin deficiency in megaloblastic anemia.

Am J Hematol 2013 Jun 15;88(6):522-6. Epub 2013 Mar 15.

Department of Pathology and Laboratory Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI 53792, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/ajh.23421DOI Listing
June 2013

Vav1 in hematologic neoplasms, a mini review.

Am J Blood Res 2012 1;2(1):1-8. Epub 2012 Jan 1.

Department of Pathology and Laboratory Medicine, University of Wisconsin School of Medicine and Public Health Madison, WI, USA.

View Article

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3301436PMC
August 2012

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Authors:
Ewan Birney John A Stamatoyannopoulos Anindya Dutta Roderic Guigó Thomas R Gingeras Elliott H Margulies Zhiping Weng Michael Snyder Emmanouil T Dermitzakis Robert E Thurman Michael S Kuehn Christopher M Taylor Shane Neph Christoph M Koch Saurabh Asthana Ankit Malhotra Ivan Adzhubei Jason A Greenbaum Robert M Andrews Paul Flicek Patrick J Boyle Hua Cao Nigel P Carter Gayle K Clelland Sean Davis Nathan Day Pawandeep Dhami Shane C Dillon Michael O Dorschner Heike Fiegler Paul G Giresi Jeff Goldy Michael Hawrylycz Andrew Haydock Richard Humbert Keith D James Brett E Johnson Ericka M Johnson Tristan T Frum Elizabeth R Rosenzweig Neerja Karnani Kirsten Lee Gregory C Lefebvre Patrick A Navas Fidencio Neri Stephen C J Parker Peter J Sabo Richard Sandstrom Anthony Shafer David Vetrie Molly Weaver Sarah Wilcox Man Yu Francis S Collins Job Dekker Jason D Lieb Thomas D Tullius Gregory E Crawford Shamil Sunyaev William S Noble Ian Dunham France Denoeud Alexandre Reymond Philipp Kapranov Joel Rozowsky Deyou Zheng Robert Castelo Adam Frankish Jennifer Harrow Srinka Ghosh Albin Sandelin Ivo L Hofacker Robert Baertsch Damian Keefe Sujit Dike Jill Cheng Heather A Hirsch Edward A Sekinger Julien Lagarde Josep F Abril Atif Shahab Christoph Flamm Claudia Fried Jörg Hackermüller Jana Hertel Manja Lindemeyer Kristin Missal Andrea Tanzer Stefan Washietl Jan Korbel Olof Emanuelsson Jakob S Pedersen Nancy Holroyd Ruth Taylor David Swarbreck Nicholas Matthews Mark C Dickson Daryl J Thomas Matthew T Weirauch James Gilbert Jorg Drenkow Ian Bell XiaoDong Zhao K G Srinivasan Wing-Kin Sung Hong Sain Ooi Kuo Ping Chiu Sylvain Foissac Tyler Alioto Michael Brent Lior Pachter Michael L Tress Alfonso Valencia Siew Woh Choo Chiou Yu Choo Catherine Ucla Caroline Manzano Carine Wyss Evelyn Cheung Taane G Clark James B Brown Madhavan Ganesh Sandeep Patel Hari Tammana Jacqueline Chrast Charlotte N Henrichsen Chikatoshi Kai Jun Kawai Ugrappa Nagalakshmi Jiaqian Wu Zheng Lian Jin Lian Peter Newburger Xueqing Zhang Peter Bickel John S Mattick Piero Carninci Yoshihide Hayashizaki Sherman Weissman Tim Hubbard Richard M Myers Jane Rogers Peter F Stadler Todd M Lowe Chia-Lin Wei Yijun Ruan Kevin Struhl Mark Gerstein Stylianos E Antonarakis Yutao Fu Eric D Green Ulaş Karaöz Adam Siepel James Taylor Laura A Liefer Kris A Wetterstrand Peter J Good Elise A Feingold Mark S Guyer Gregory M Cooper George Asimenos Colin N Dewey Minmei Hou Sergey Nikolaev Juan I Montoya-Burgos Ari Löytynoja Simon Whelan Fabio Pardi Tim Massingham Haiyan Huang Nancy R Zhang Ian Holmes James C Mullikin Abel Ureta-Vidal Benedict Paten Michael Seringhaus Deanna Church Kate Rosenbloom W James Kent Eric A Stone Serafim Batzoglou Nick Goldman Ross C Hardison David Haussler Webb Miller Arend Sidow Nathan D Trinklein Zhengdong D Zhang Leah Barrera Rhona Stuart David C King Adam Ameur Stefan Enroth Mark C Bieda Jonghwan Kim Akshay A Bhinge Nan Jiang Jun Liu Fei Yao Vinsensius B Vega Charlie W H Lee Patrick Ng Atif Shahab Annie Yang Zarmik Moqtaderi Zhou Zhu Xiaoqin Xu Sharon Squazzo Matthew J Oberley David Inman Michael A Singer Todd A Richmond Kyle J Munn Alvaro Rada-Iglesias Ola Wallerman Jan Komorowski Joanna C Fowler Phillippe Couttet Alexander W Bruce Oliver M Dovey Peter D Ellis Cordelia F Langford David A Nix Ghia Euskirchen Stephen Hartman Alexander E Urban Peter Kraus Sara Van Calcar Nate Heintzman Tae Hoon Kim Kun Wang Chunxu Qu Gary Hon Rosa Luna Christopher K Glass M Geoff Rosenfeld Shelley Force Aldred Sara J Cooper Anason Halees Jane M Lin Hennady P Shulha Xiaoling Zhang Mousheng Xu Jaafar N S Haidar Yong Yu Yijun Ruan Vishwanath R Iyer Roland D Green Claes Wadelius Peggy J Farnham Bing Ren Rachel A Harte Angie S Hinrichs Heather Trumbower Hiram Clawson Jennifer Hillman-Jackson Ann S Zweig Kayla Smith Archana Thakkapallayil Galt Barber Robert M Kuhn Donna Karolchik Lluis Armengol Christine P Bird Paul I W de Bakker Andrew D Kern Nuria Lopez-Bigas Joel D Martin Barbara E Stranger Abigail Woodroffe Eugene Davydov Antigone Dimas Eduardo Eyras Ingileif B Hallgrímsdóttir Julian Huppert Michael C Zody Gonçalo R Abecasis Xavier Estivill Gerard G Bouffard Xiaobin Guan Nancy F Hansen Jacquelyn R Idol Valerie V B Maduro Baishali Maskeri Jennifer C McDowell Morgan Park Pamela J Thomas Alice C Young Robert W Blakesley Donna M Muzny Erica Sodergren David A Wheeler Kim C Worley Huaiyang Jiang George M Weinstock Richard A Gibbs Tina Graves Robert Fulton Elaine R Mardis Richard K Wilson Michele Clamp James Cuff Sante Gnerre David B Jaffe Jean L Chang Kerstin Lindblad-Toh Eric S Lander Maxim Koriabine Mikhail Nefedov Kazutoyo Osoegawa Yuko Yoshinaga Baoli Zhu Pieter J de Jong
June 2007

High-throughput screening of chromatin immunoprecipitates using CpG-island microarrays.

Methods Enzymol 2004 ;376:315-34

McArdle Laboratory for Cancer Research, University of Wisconsin, Madison 53706, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/S0076-6879(03)76021-2DOI Listing
July 2004

Probing chromatin immunoprecipitates with CpG-island microarrays to identify genomic sites occupied by DNA-binding proteins.

Methods Enzymol 2003 ;371:577-96

Department of Oncology, Room 417A, McArdle Laboratory of Cancer Research, University of Wisconsin-Madison, 1400 University Avenue, Madison, Wisconsin 53706-1599, USA.

View Article

Download full-text PDF

Source
http://linkinghub.elsevier.com/retrieve/pii/S007668790371043
Publisher Site
http://dx.doi.org/10.1016/S0076-6879(03)71043-XDOI Listing
February 2004

E2F6 negatively regulates BRCA1 in human cancer cells without methylation of histone H3 on lysine 9.

J Biol Chem 2003 Oct 8;278(43):42466-76. Epub 2003 Aug 8.

McArdle Laboratory for Cancer Research, University of Wisconsin Medical School, 1400 University Avenue, Madison, WI 53706, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M307733200DOI Listing
October 2003