Matteo Pellegrini

Matteo Pellegrini

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Matteo Pellegrini

Publications by authors named "Matteo Pellegrini"

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Activation of the HIF1α/PFKFB3 stress response pathway in beta cells in type 1 diabetes.

Diabetologia 2020 Jan 13;63(1):149-161. Epub 2019 Nov 13.

Larry L. Hillblom Islet Research Center, David Geffen School of Medicine at UCLA, University of California Los Angeles, 10833 Le Conte Avenue, 33-165 CHS, Los Angeles, CA, 90095-7073, USA.

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http://dx.doi.org/10.1007/s00125-019-05030-5DOI Listing
January 2020

Identification of a systemic interferon-γ inducible antimicrobial gene signature in leprosy patients undergoing reversal reaction.

PLoS Negl Trop Dis 2019 Oct 10;13(10):e0007764. Epub 2019 Oct 10.

Division of Dermatology, Department of Medicine, David Geffen School of Medicine at University of California (UCLA), Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.pntd.0007764DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805014PMC
October 2019

Human epigenetic ageing is logarithmic with time across the entire lifespan.

Epigenetics 2019 Sep 6;14(9):912-926. Epub 2019 Jun 6.

b Department of Molecular, Cell and Developmental Biology, University of California , Los Angeles , CA , USA.

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http://dx.doi.org/10.1080/15592294.2019.1623634DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6691990PMC
September 2019

Interactions between core histone marks and DNA methyltransferases predict DNA methylation patterns observed in human cells and tissues.

Epigenetics 2019 Sep 17:1-11. Epub 2019 Sep 17.

Department of Molecular, Cell, and Developmental Biology, University of California , Los Angeles , CA , USA.

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http://dx.doi.org/10.1080/15592294.2019.1666649DOI Listing
September 2019

The size of cell-free mitochondrial DNA in blood is inversely correlated with tumor burden in cancer patients.

Precis Clin Med 2019 Sep 1;2(3):131-139. Epub 2019 Oct 1.

Department of Human Genetics, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1093/pcmedi/pbz014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6770274PMC
September 2019

IL-1β Induces the Rapid Secretion of the Antimicrobial Protein IL-26 from Th17 Cells.

J Immunol 2019 Aug 24;203(4):911-921. Epub 2019 Jun 24.

Division of Dermatology, Department of Medicine, David Geffen School of Medicine at the University of California, Los Angeles, Los Angeles, CA 90095;

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http://dx.doi.org/10.4049/jimmunol.1900318DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6684376PMC
August 2019

RNA Modulates the Expression of Cell Cycle Genes in Human Fibroblasts.

Int J Mol Sci 2019 Jul 5;20(13). Epub 2019 Jul 5.

Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

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http://dx.doi.org/10.3390/ijms20133315DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6651528PMC
July 2019

The cell fate regulator NUPR1 is induced by Mycobacterium leprae via type I interferon in human leprosy.

PLoS Negl Trop Dis 2019 Jul 25;13(7):e0007589. Epub 2019 Jul 25.

Division of Dermatology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.pntd.0007589DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6684084PMC
July 2019

ACTINN: Automated Identification of Cell Types in Single Cell RNA Sequencing.

Bioinformatics 2019 Jul 29. Epub 2019 Jul 29.

Molecular Biology Institute, University of California, Los Angeles, CA, USA.

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http://dx.doi.org/10.1093/bioinformatics/btz592DOI Listing
July 2019

H3K36 Methylation and the Chromodomain Protein Eaf3 Are Required for Proper Cotranscriptional Spliceosome Assembly.

Cell Rep 2019 Jun;27(13):3760-3769.e4

Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA 90095, USA; Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, Los Angeles, CA 90095, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.05.100DOI Listing
June 2019

DNA methylation estimation using methylation-sensitive restriction enzyme bisulfite sequencing (MREBS).

PLoS One 2019 4;14(4):e0214368. Epub 2019 Apr 4.

Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California, Los Angeles, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0214368PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6448829PMC
April 2019

A temporal transcriptome and methylome in human embryonic stem cell-derived cardiomyocytes identifies novel regulators of early cardiac development.

Epigenetics 2018 19;13(10-11):1013-1026. Epub 2018 Oct 19.

a Department of Molecular, Cell, and Developmental Biology , University of California , Los Angeles , CA , USA.

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http://dx.doi.org/10.1080/15592294.2018.1526029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342070PMC
March 2019

Endocardially Derived Macrophages Are Essential for Valvular Remodeling.

Dev Cell 2019 03 21;48(5):617-630.e3. Epub 2019 Feb 21.

Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, Los Angeles, CA 90095, USA; Division of Cardiology, Department of Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA; Jonsson Comprehensive Cancer Center, University of California, Los Angeles, Los Angeles, CA 90095, USA; Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California, Los Angeles, Los Angeles, CA 90095, USA; Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA 90095, USA. Electronic address:

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http://dx.doi.org/10.1016/j.devcel.2019.01.021DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6440481PMC
March 2019

Plasticity of antimicrobial and phagocytic programs in human macrophages.

Immunology 2019 02 11;156(2):164-173. Epub 2018 Nov 11.

Division of Dermatology, Department of Medicine, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.

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http://doi.wiley.com/10.1111/imm.13013
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http://dx.doi.org/10.1111/imm.13013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6328994PMC
February 2019

Comparison of reprogramming factor targets reveals both species-specific and conserved mechanisms in early iPSC reprogramming.

BMC Genomics 2018 Dec 22;19(1):956. Epub 2018 Dec 22.

Department of Molecular, Cellular and Developmental Biology, Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, CA, 90095, USA.

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https://bmcgenomics.biomedcentral.com/articles/10.1186/s1286
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http://dx.doi.org/10.1186/s12864-018-5326-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303873PMC
December 2018

GATA4 represses RANKL in osteoblasts via multiple long-range enhancers to regulate osteoclast differentiation.

Bone 2018 11 19;116:78-86. Epub 2018 Jul 19.

Department of Orthopaedic Surgery and Biomedical Engineering, University of Tennessee Health Science Center, Memphis, TN, United States. Electronic address:

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http://dx.doi.org/10.1016/j.bone.2018.07.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6158087PMC
November 2018

Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle.

DNA Res 2018 Oct;25(5):451-464

Genetics and Microbiology Research Group, Department of Agrarian Production, Public University of Navarre, Pamplona, Navarre, Spain.

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http://dx.doi.org/10.1093/dnares/dsy016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6191308PMC
October 2018

A multi-tissue full lifespan epigenetic clock for mice.

Aging (Albany NY) 2018 10;10(10):2832-2854

Molecular, Cell and Developmental Biology, University of California Los Angeles, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.18632/aging.101590DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6224226PMC
October 2018

Directed strain evolution restructures metabolism for 1-butanol production in minimal media.

Metab Eng 2018 09 11;49:153-163. Epub 2018 Aug 11.

Institute of Biological Chemistry, Academia Sinica, Taipei, Taiwan. Electronic address:

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http://dx.doi.org/10.1016/j.ymben.2018.08.004DOI Listing
September 2018

Vav3-induced cytoskeletal dynamics contribute to heterotypic properties of endothelial barriers.

J Cell Biol 2018 08 1;217(8):2813-2830. Epub 2018 Jun 1.

Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, Los Angeles, CA

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http://dx.doi.org/10.1083/jcb.201706041DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6080943PMC
August 2018

CRACR2A-Mediated TCR Signaling Promotes Local Effector Th1 and Th17 Responses.

J Immunol 2018 08 9;201(4):1174-1185. Epub 2018 Jul 9.

Department of Physiology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095;

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http://dx.doi.org/10.4049/jimmunol.1800659DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6081249PMC
August 2018

Seed genome hypomethylated regions are enriched in transcription factor genes.

Proc Natl Acad Sci U S A 2018 08 13;115(35):E8315-E8322. Epub 2018 Aug 13.

Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, CA 90095;

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http://dx.doi.org/10.1073/pnas.1811017115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6126732PMC
August 2018

Synaptic N-methyladenosine (mA) epitranscriptome reveals functional partitioning of localized transcripts.

Nat Neurosci 2018 07 27;21(7):1004-1014. Epub 2018 Jun 27.

Institute for Integrated Cell-Material Sciences (iCeMS), Kyoto University, Kyoto, Japan.

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http://dx.doi.org/10.1038/s41593-018-0173-6DOI Listing
July 2018

An epigenetic pacemaker is detected via a fast conditional expectation maximization algorithm.

Epigenomics 2018 06;10(6):695-706

Deptartment of Molecular, Cell & Developmental Biology, University of California, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.2217/epi-2017-0130DOI Listing
June 2018

Loss of MECP2 Leads to Activation of P53 and Neuronal Senescence.

Stem Cell Reports 2018 05;10(5):1453-1463

Department of Molecular Cell and Developmental Biology, UCLA, Los Angeles, CA 90095, USA; Eli and Edythe Broad Center for Regenerative Medicine, UCLA, Los Angeles, CA 90095, USA; Molecular Biology Institute, UCLA, Los Angeles, CA 90095, USA. Electronic address:

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http://dx.doi.org/10.1016/j.stemcr.2018.04.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995366PMC
May 2018

The Memory of Environmental Chemical Exposure in C. elegans Is Dependent on the Jumonji Demethylases jmjd-2 and jmjd-3/utx-1.

Cell Rep 2018 05;23(8):2392-2404

Molecular Toxicology Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA 90095, USA; Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA 90095, USA; Institute for Society and Genetics, University of California, Los Angeles, Los Angeles, CA 90095, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2018.04.078DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6003705PMC
May 2018

Prenatal Growth Patterns and Birthweight Are Associated With Differential DNA Methylation and Gene Expression of Cardiometabolic Risk Genes in Human Placentas: A Discovery-Based Approach.

Reprod Sci 2018 04 11;25(4):523-539. Epub 2017 Jul 11.

2 Division of Neonatology and Developmental Biology, Department of Pediatrics, Neonatal Research Center of the UCLA Children's Discovery and Innovation Institute, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.

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http://journals.sagepub.com/doi/10.1177/1933719117716779
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http://dx.doi.org/10.1177/1933719117716779DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6348426PMC
April 2018

CGmapTools improves the precision of heterozygous SNV calls and supports allele-specific methylation detection and visualization in bisulfite-sequencing data.

Bioinformatics 2018 02;34(3):381-387

State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization, Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing 100193, China.

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http://dx.doi.org/10.1093/bioinformatics/btx595DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6454434PMC
February 2018

Similarity between soybean and seed methylomes and loss of non-CG methylation does not affect seed development.

Proc Natl Acad Sci U S A 2017 11 23;114(45):E9730-E9739. Epub 2017 Oct 23.

Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, CA 90095;

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http://dx.doi.org/10.1073/pnas.1716758114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5692608PMC
November 2017

Omega-3 fatty acids increase the unfolded protein response and improve amyloid-β phagocytosis by macrophages of patients with mild cognitive impairment.

FASEB J 2017 10 20;31(10):4359-4369. Epub 2017 Jun 20.

Department of Cell, Molecular, and Developmental Biology, UCLA Life Sciences, University of California, Los Angeles, Los Angeles, California, USA;

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http://dx.doi.org/10.1096/fj.201700290RDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5602894PMC
October 2017

Addressing the Digital Divide in Contemporary Biology: Lessons from Teaching UNIX.

Trends Biotechnol 2017 10 15;35(10):901-903. Epub 2017 Jul 15.

Department of Computer Science, University of California Los Angeles, 580 Portola Plaza, Los Angeles, CA 90095, USA; Department of Human Genetics, University of California Los Angeles, 695 Charles E. Young Drive South, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1016/j.tibtech.2017.06.007DOI Listing
October 2017

High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure.

Circulation 2017 Oct 11;136(17):1613-1625. Epub 2017 Aug 11.

From Departments of Anesthesiology and Perioperative Medicine (M.R.-G., D.J.C., T.H.K., E.K., E.M., T.-T.S., E.S., S.R., Y.W., T.M.V.), Medicine (D.L., P.P., Y.W., T.M.V.), Physiology (P.P.,Y.W., T.M.V.), Molecular, Cellular and Developmental Biology (M.P.), UCLA, Los Angeles, CA; Nora Eccles Harrison Cardiovascular Research and Training Institute, University of Utah, Salt Lake City (E.B.); Ludwig Institute for Cancer Research, Department of Cellular and Molecular Medicine, Institute of Genomic Medicine, and Moores Cancer Center, UCSD, San Diego, CA (A.D.S., B.R.); and Department of Cell Biology and Genetics, Erasmus MC, Rotterdam, The Netherlands (N.J.G.).

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http://dx.doi.org/10.1161/CIRCULATIONAHA.117.029430DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5648689PMC
October 2017

Targeted mutagenesis in a human-parasitic nematode.

PLoS Pathog 2017 Oct 10;13(10):e1006675. Epub 2017 Oct 10.

Molecular Biology Institute, University of California, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1006675DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650185PMC
October 2017

SaVanT: a web-based tool for the sample-level visualization of molecular signatures in gene expression profiles.

BMC Genomics 2017 Oct 25;18(1):824. Epub 2017 Oct 25.

Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, CA, 90095, USA.

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http://dx.doi.org/10.1186/s12864-017-4167-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5657101PMC
October 2017

Astrocytes Can Adopt Endothelial Cell Fates in a p53-Dependent Manner.

Mol Neurobiol 2017 08 8;54(6):4584-4596. Epub 2016 Jul 8.

Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, 635 Charles E. Young Dr. South, Rm 415, Los Angeles, CA, 90095, USA.

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http://dx.doi.org/10.1007/s12035-016-9974-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5219956PMC
August 2017

Transcriptomic Modification in the Cerebral Cortex following Noninvasive Brain Stimulation: RNA-Sequencing Approach.

Neural Plast 2016 29;2016:5942980. Epub 2016 Dec 29.

Applied Neuroscience, Warfighter Interface Division, 711th Human Performance Wing, Air Force Research Laboratory, Wright-Patterson AFB, Dayton, OH 45433, USA.

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http://dx.doi.org/10.1155/2016/5942980DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5227175PMC
August 2017

Modulation of innate immunity of patients with Alzheimer's disease by omega-3 fatty acids.

FASEB J 2017 08 18;31(8):3229-3239. Epub 2017 Apr 18.

Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, Los Angeles, California, USA.

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http://dx.doi.org/10.1096/fj.201700065RDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5503712PMC
August 2017

Divergence in Morris Water Maze-Based Cognitive Performance under Chronic Stress Is Associated with the Hippocampal Whole Transcriptomic Modification in Mice.

Front Mol Neurosci 2017 30;10:275. Epub 2017 Aug 30.

Applied Neuroscience, Warfighter Interface Division, 711th Human Performance Wing, Air Force Research LaboratoryWright-Patterson AFB, OH, United States.

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http://dx.doi.org/10.3389/fnmol.2017.00275DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5582454PMC
August 2017

Abf1 and other general regulatory factors control ribosome biogenesis gene expression in budding yeast.

Nucleic Acids Res 2017 05;45(8):4493-4506

Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parco Area delle Scienze 23/A, 43124 Parma, Italy.

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http://dx.doi.org/10.1093/nar/gkx058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5416754PMC
May 2017

Altered methylation of specific DNA loci in the liver of -null mice results in repression of and and is associated with development of preneoplastic foci.

FASEB J 2017 05 8;31(5):2090-2103. Epub 2017 Feb 8.

Department of Nutrition, Nutrition Research Institute, University of North Carolina at Chapel Hill, Kannapolis, North Carolina, USA;

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http://dx.doi.org/10.1096/fj.201601169RDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5388550PMC
May 2017

Chromosome-level genome assembly and transcriptome of the green alga illuminates astaxanthin production.

Proc Natl Acad Sci U S A 2017 05 8;114(21):E4296-E4305. Epub 2017 May 8.

Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102;

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http://dx.doi.org/10.1073/pnas.1619928114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5448231PMC
May 2017

Cardiac Fibroblasts Adopt Osteogenic Fates and Can Be Targeted to Attenuate Pathological Heart Calcification.

Cell Stem Cell 2017 02 17;20(2):218-232.e5. Epub 2016 Nov 17.

Division of Cardiology, Department of Medicine, David Geffen School of Medicine, University of California, Los Angeles (UCLA), CA 90095, USA; Cardiovascular Research Laboratory, David Geffen School of Medicine, UCLA, CA 90095, USA; Department of Molecular, Cell and Developmental Biology, School of Letters and Sciences, UCLA, CA 90095, USA; Eli & Edythe Broad Center of Regenerative Medicine and Stem Cell Research, UCLA, CA 90095, USA; Molecular Biology Institute, UCLA, CA 90095, USA; Jonsson Comprehensive Cancer Center, UCLA, CA 90095, USA. Electronic address:

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http://dx.doi.org/10.1016/j.stem.2016.10.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5291784PMC
February 2017

Human Embryonic Stem Cells Do Not Change Their X Inactivation Status during Differentiation.

Cell Rep 2017 01 16;18(1):54-67. Epub 2016 Dec 16.

Department of Biological Chemistry, Molecular Biology Institute, Jonsson Comprehensive Cancer Center, Bioinformatics Program, Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2016.11.054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5214931PMC
January 2017

Regulation of Marginal Zone B-Cell Differentiation by MicroRNA-146a.

Front Immunol 2016 16;7:670. Epub 2017 Jan 16.

Department of Pathology and Laboratory Medicine, University of California Los Angeles, Los Angeles, CA, USA; Jonsson Comprehensive Cancer Center, University of California Los Angeles, Los Angeles, CA, USA; Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California Los Angeles, Los Angeles, CA, USA.

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http://dx.doi.org/10.3389/fimmu.2016.00670DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5237642PMC
January 2017

A Statistical Framework to Identify Deviation from Time Linearity in Epigenetic Aging.

PLoS Comput Biol 2016 Nov 11;12(11):e1005183. Epub 2016 Nov 11.

Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1005183DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5106012PMC
November 2016

Epigenetic changes in T-cell and monocyte signatures and production of neurotoxic cytokines in ALS patients.

FASEB J 2016 10 1;30(10):3461-3473. Epub 2016 Jul 1.

Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, Los Angeles, California, USA; Department of Surgery, UCLA School of Medicine, University of California, Los Angeles, Los Angeles, California, USA; and

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http://dx.doi.org/10.1096/fj.201600259RRDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5024692PMC
October 2016

Gestational food restriction decreases placental interleukin-10 expression and markers of autophagy and endoplasmic reticulum stress in murine intrauterine growth restriction.

Nutr Res 2016 10 5;36(10):1055-1067. Epub 2016 Aug 5.

David Geffen School of Medicine at UCLA, Department of Pediatrics, Division of Neonatology & Developmental Biology, Neonatal Research Center of the UCLA Children's Discovery and Innovation Institute, 10833 Le Conte Avenue, MDCC 22-412, Los Angeles, CA, 90095, USA. Electronic address:

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http://dx.doi.org/10.1016/j.nutres.2016.08.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5119922PMC
October 2016

An asthma-associated IL4R variant exacerbates airway inflammation by promoting conversion of regulatory T cells to TH17-like cells.

Nat Med 2016 09 1;22(9):1013-22. Epub 2016 Aug 1.

Division of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1038/nm.4147DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5014738PMC
September 2016

Reversible Regulation of Promoter and Enhancer Histone Landscape by DNA Methylation in Mouse Embryonic Stem Cells.

Cell Rep 2016 09;17(1):289-302

Department of Human Genetics and Broad Stem Cell Research Center, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22111247163117
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http://dx.doi.org/10.1016/j.celrep.2016.08.083DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5507178PMC
September 2016

Novel features of telomere biology revealed by the absence of telomeric DNA methylation.

Genome Res 2016 08 12;26(8):1047-56. Epub 2016 Jul 12.

Institute of Vegetal Biochemistry and Photosynthesis, CSIC-University of Seville, IBVF (CSIC-US), 41092 Seville, Spain.

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http://dx.doi.org/10.1101/gr.202465.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4971770PMC
August 2016

A naïve Bayesian classifier for identifying plant microRNAs.

Plant J 2016 06 20;86(6):481-92. Epub 2016 Jun 20.

Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, CA, 90095, USA.

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http://dx.doi.org/10.1111/tpj.13180DOI Listing
June 2016

Identification and Characterization of a cis-Regulatory Element for Zygotic Gene Expression in Chlamydomonas reinhardtii.

G3 (Bethesda) 2016 06 1;6(6):1541-8. Epub 2016 Jun 1.

Donald Danforth Plant Science Center, St. Louis, Missouri 63132

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http://dx.doi.org/10.1534/g3.116.029181DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889651PMC
June 2016

S100A12 Is Part of the Antimicrobial Network against Mycobacterium leprae in Human Macrophages.

PLoS Pathog 2016 06 29;12(6):e1005705. Epub 2016 Jun 29.

Department of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1005705DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4927120PMC
June 2016

CRISPR-Mediated VHL Knockout Generates an Improved Model for Metastatic Renal Cell Carcinoma.

Sci Rep 2016 06 30;6:29032. Epub 2016 Jun 30.

Department of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California at Los Angeles CA 90095, USA.

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http://dx.doi.org/10.1038/srep29032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4928183PMC
June 2016

Species-wide patterns of DNA methylation variation in Quercus lobata and their association with climate gradients.

Mol Ecol 2016 Apr 14;25(8):1665-80. Epub 2016 Mar 14.

Ecology and Evolutionary Biology, University of California, Los Angeles, CA, 90095-7239, USA.

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http://dx.doi.org/10.1111/mec.13563DOI Listing
April 2016

DNA Methylation Indicates Susceptibility to Isoproterenol-Induced Cardiac Pathology and Is Associated With Chromatin States.

Circ Res 2016 Mar 11;118(5):786-97. Epub 2016 Jan 11.

From the Departments of Anesthesiology and Perioperative Medicine (H.C., C.D.R., S.R., Y.W., T.M.V.), Human Genetics (A.J.L.), Microbiology, Immunology and Molecular Genetics (A.J.L.), Molecular, Cellular and Development Biology (L.D.O., L.R., M.P.), Medicine/Cardiology (J.W., Y.W., A.J.L., T.M.V.), and Physiology, David Geffen School of Medicine, University of California, Los Angeles (Y.W., T.M.V.).

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http://dx.doi.org/10.1161/CIRCRESAHA.115.305298DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4779427PMC
March 2016

Discovering communities in complex networks by edge label propagation.

Sci Rep 2016 Mar 1;6:22470. Epub 2016 Mar 1.

Department of Automation, Shanghai Jiao Tong University, Shanghai 200240, China.

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http://dx.doi.org/10.1038/srep22470DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772381PMC
March 2016