Mathieu Lemire

Mathieu Lemire

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Mathieu Lemire

Mathieu Lemire

Publications by authors named "Mathieu Lemire"

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Novel Common Genetic Susceptibility Loci for Colorectal Cancer.

Authors:
Stephanie L Schmit Christopher K Edlund Fredrick R Schumacher Jian Gong Tabitha A Harrison Jeroen R Huyghe Chenxu Qu Marilena Melas David J Van Den Berg Hansong Wang Stephanie Tring Sarah J Plummer Demetrius Albanes M Henar Alonso Christopher I Amos Kristen Anton Aaron K Aragaki Volker Arndt Elizabeth L Barry Sonja I Berndt Stéphane Bezieau Stephanie Bien Amanda Bloomer Juergen Boehm Marie-Christine Boutron-Ruault Hermann Brenner Stefanie Brezina Daniel D Buchanan Katja Butterbach Bette J Caan Peter T Campbell Christopher S Carlson Jose E Castelao Andrew T Chan Jenny Chang-Claude Stephen J Chanock Iona Cheng Ya-Wen Cheng Lee Soo Chin James M Church Timothy Church Gerhard A Coetzee Michelle Cotterchio Marcia Cruz Correa Keith R Curtis David Duggan Douglas F Easton Dallas English Edith J M Feskens Rocky Fischer Liesel M FitzGerald Barbara K Fortini Lars G Fritsche Charles S Fuchs Manuela Gago-Dominguez Manish Gala Steven J Gallinger W James Gauderman Graham G Giles Edward L Giovannucci Stephanie M Gogarten Clicerio Gonzalez-Villalpando Elena M Gonzalez-Villalpando William M Grady Joel K Greenson Andrea Gsur Marc Gunter Christopher A Haiman Jochen Hampe Sophia Harlid John F Harju Richard B Hayes Philipp Hofer Michael Hoffmeister John L Hopper Shu-Chen Huang Jose Maria Huerta Thomas J Hudson David J Hunter Gregory E Idos Motoki Iwasaki Rebecca D Jackson Eric J Jacobs Sun Ha Jee Mark A Jenkins Wei-Hua Jia Shuo Jiao Amit D Joshi Laurence N Kolonel Suminori Kono Charles Kooperberg Vittorio Krogh Tilman Kuehn Sébastien Küry Andrea LaCroix Cecelia A Laurie Flavio Lejbkowicz Mathieu Lemire Heinz-Josef Lenz David Levine Christopher I Li Li Li Wolfgang Lieb Yi Lin Noralane M Lindor Yun-Ru Liu Fotios Loupakis Yingchang Lu Frank Luh Jing Ma Christoph Mancao Frank J Manion Sanford D Markowitz Vicente Martin Koichi Matsuda Keitaro Matsuo Kevin J McDonnell Caroline E McNeil Roger Milne Antonio J Molina Bhramar Mukherjee Neil Murphy Polly A Newcomb Kenneth Offit Hanane Omichessan Domenico Palli Jesus P Paredes Cotoré Julyann Pérez-Mayoral Paul D Pharoah John D Potter Conghui Qu Leon Raskin Gad Rennert Hedy S Rennert Bridget M Riggs Clemens Schafmayer Robert E Schoen Thomas A Sellers Daniela Seminara Gianluca Severi Wei Shi David Shibata Xiao-Ou Shu Erin M Siegel Martha L Slattery Melissa Southey Zsofia K Stadler Mariana C Stern Sebastian Stintzing Darin Taverna Stephen N Thibodeau Duncan C Thomas Antonia Trichopoulou Shoichiro Tsugane Cornelia M Ulrich Franzel J B van Duijnhoven Bethany van Guelpan Joseph Vijai Jarmo Virtamo Stephanie J Weinstein Emily White Aung Ko Win Alicja Wolk Michael Woods Anna H Wu Kana Wu Yong-Bing Xiang Yun Yen Brent W Zanke Yi-Xin Zeng Ben Zhang Niha Zubair Sun-Seog Kweon Jane C Figueiredo Wei Zheng Loic Le Marchand Annika Lindblom Victor Moreno Ulrike Peters Graham Casey Li Hsu David V Conti Stephen B Gruber

J Natl Cancer Inst 2019 Feb;111(2):146-157

Department of Preventive Medicine, USC Norris Comprehensive Cancer Center.

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http://dx.doi.org/10.1093/jnci/djy099DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6555904PMC
February 2019

Integration of Genomic and Transcriptional Features in Pancreatic Cancer Reveals Increased Cell Cycle Progression in Metastases.

Cancer Cell 2019 Feb 24;35(2):267-282.e7. Epub 2019 Jan 24.

PanCuRx Translational Research Initiative, Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada; Department of Surgery, University of Toronto, Toronto, ON M5T 1P5, Canada; Hepatobiliary/Pancreatic Surgical Oncology Program, University Health Network, Toronto, ON M5G 2M9, Canada; Lunenfeld Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, ON M5G 1X5, Canada. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S15356108183058
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http://dx.doi.org/10.1016/j.ccell.2018.12.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6398439PMC
February 2019

Discovery of common and rare genetic risk variants for colorectal cancer.

Authors:
Jeroen R Huyghe Stephanie A Bien Tabitha A Harrison Hyun Min Kang Sai Chen Stephanie L Schmit David V Conti Conghui Qu Jihyoun Jeon Christopher K Edlund Peyton Greenside Michael Wainberg Fredrick R Schumacher Joshua D Smith David M Levine Sarah C Nelson Nasa A Sinnott-Armstrong Demetrius Albanes M Henar Alonso Kristin Anderson Coral Arnau-Collell Volker Arndt Christina Bamia Barbara L Banbury John A Baron Sonja I Berndt Stéphane Bézieau D Timothy Bishop Juergen Boehm Heiner Boeing Hermann Brenner Stefanie Brezina Stephan Buch Daniel D Buchanan Andrea Burnett-Hartman Katja Butterbach Bette J Caan Peter T Campbell Christopher S Carlson Sergi Castellví-Bel Andrew T Chan Jenny Chang-Claude Stephen J Chanock Maria-Dolores Chirlaque Sang Hee Cho Charles M Connolly Amanda J Cross Katarina Cuk Keith R Curtis Albert de la Chapelle Kimberly F Doheny David Duggan Douglas F Easton Sjoerd G Elias Faye Elliott Dallas R English Edith J M Feskens Jane C Figueiredo Rocky Fischer Liesel M FitzGerald David Forman Manish Gala Steven Gallinger W James Gauderman Graham G Giles Elizabeth Gillanders Jian Gong Phyllis J Goodman William M Grady John S Grove Andrea Gsur Marc J Gunter Robert W Haile Jochen Hampe Heather Hampel Sophia Harlid Richard B Hayes Philipp Hofer Michael Hoffmeister John L Hopper Wan-Ling Hsu Wen-Yi Huang Thomas J Hudson David J Hunter Gemma Ibañez-Sanz Gregory E Idos Roxann Ingersoll Rebecca D Jackson Eric J Jacobs Mark A Jenkins Amit D Joshi Corinne E Joshu Temitope O Keku Timothy J Key Hyeong Rok Kim Emiko Kobayashi Laurence N Kolonel Charles Kooperberg Tilman Kühn Sébastien Küry Sun-Seog Kweon Susanna C Larsson Cecelia A Laurie Loic Le Marchand Suzanne M Leal Soo Chin Lee Flavio Lejbkowicz Mathieu Lemire Christopher I Li Li Li Wolfgang Lieb Yi Lin Annika Lindblom Noralane M Lindor Hua Ling Tin L Louie Satu Männistö Sanford D Markowitz Vicente Martín Giovanna Masala Caroline E McNeil Marilena Melas Roger L Milne Lorena Moreno Neil Murphy Robin Myte Alessio Naccarati Polly A Newcomb Kenneth Offit Shuji Ogino N Charlotte Onland-Moret Barbara Pardini Patrick S Parfrey Rachel Pearlman Vittorio Perduca Paul D P Pharoah Mila Pinchev Elizabeth A Platz Ross L Prentice Elizabeth Pugh Leon Raskin Gad Rennert Hedy S Rennert Elio Riboli Miguel Rodríguez-Barranco Jane Romm Lori C Sakoda Clemens Schafmayer Robert E Schoen Daniela Seminara Mitul Shah Tameka Shelford Min-Ho Shin Katerina Shulman Sabina Sieri Martha L Slattery Melissa C Southey Zsofia K Stadler Christa Stegmaier Yu-Ru Su Catherine M Tangen Stephen N Thibodeau Duncan C Thomas Sushma S Thomas Amanda E Toland Antonia Trichopoulou Cornelia M Ulrich David J Van Den Berg Franzel J B van Duijnhoven Bethany Van Guelpen Henk van Kranen Joseph Vijai Kala Visvanathan Pavel Vodicka Ludmila Vodickova Veronika Vymetalkova Korbinian Weigl Stephanie J Weinstein Emily White Aung Ko Win C Roland Wolf Alicja Wolk Michael O Woods Anna H Wu Syed H Zaidi Brent W Zanke Qing Zhang Wei Zheng Peter C Scacheri John D Potter Michael C Bassik Anshul Kundaje Graham Casey Victor Moreno Goncalo R Abecasis Deborah A Nickerson Stephen B Gruber Li Hsu Ulrike Peters

Nat Genet 2019 01 3;51(1):76-87. Epub 2018 Dec 3.

Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

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http://www.nature.com/articles/s41588-018-0286-6
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http://dx.doi.org/10.1038/s41588-018-0286-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6358437PMC
January 2019

The dynamic DNA methylation landscape of the shore is altered by -93G>A polymorphism in normal tissues and colorectal cancer.

Clin Epigenetics 2017 9;9:26. Epub 2017 Mar 9.

Lunenfeld-Tanenbaum Research Institute, Sinai Health System, 60 Murray St., Toronto, Ontario M5T 3L9 Canada.

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http://dx.doi.org/10.1186/s13148-017-0326-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5345264PMC
December 2017

In silico pathway analysis and tissue specific cis-eQTL for colorectal cancer GWAS risk variants.

BMC Genomics 2017 05 15;18(1):381. Epub 2017 May 15.

Cancer Epidemiology Program, University of Hawaii Cancer Center, Honolulu, HI, USA.

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http://dx.doi.org/10.1186/s12864-017-3750-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5432975PMC
May 2017

Genome-Wide DNA Methylation Analysis Reveals Epigenetic Dysregulation of MicroRNA-34A in TP53-Associated Cancer Susceptibility.

J Clin Oncol 2016 Oct;34(30):3697-3704

Nardin Samuel, Gavin Wilson, James Tran, Meredith Irwin, Rosanna Weksberg, Thomas J. Hudson, and David Malkin, University of Toronto; Nardin Samuel, Badr Id Said, Youliang Lou, Weili Li, Ana Novokmet, James Tran, Sanaa Choufani, Marc Remke, Vijay Ramaswamy, Florence M.G. Cavalli, Michael D. Taylor, Uri Tabori, Meredith Irwin, Rosanna Weksberg, Jonathan D. Wasserman, Andrew D. Paterson, and David Malkin, The Hospital for Sick Children; Nardin Samuel, Gavin Wilson, Mathieu Lemire, and Thomas J. Hudson, Ontario Institute for Cancer Research; Christine Elser, Princess Margaret Cancer Centre, Toronto, Ontario, Canada; Diana Merino, National Institutes of Health, Bethesda, MD; Kim E. Nichols, St Jude Children's Research Hospital, Memphis, TN; Jonathan L. Finlay, Nationwide Children's Hospital, Columbus, OH; Lynn Meister, Joe DiMaggio Children's Hospital, Hollywood, FL; Jordan R. Hansford, Children's Cancer Centre, Royal Children's Hospital, Melbourne, Victoria, Australia; and Maria Isabel W. Achatz, Hospital AC Camargo, São Paulo, Brazil.

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http://dx.doi.org/10.1200/JCO.2016.67.6940DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366343PMC
October 2016

Association between Variants in Atopy-Related Immunologic Candidate Genes and Pancreatic Cancer Risk.

PLoS One 2015 6;10(5):e0125273. Epub 2015 May 6.

Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada; Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A1, Canada.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0125273PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4422524PMC
April 2016

Powerful Set-Based Gene-Environment Interaction Testing Framework for Complex Diseases.

Genet Epidemiol 2015 Dec 10;39(8):609-18. Epub 2015 Jun 10.

Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.

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http://dx.doi.org/10.1002/gepi.21908DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4675704PMC
December 2015

The effect of 5-fluorouracil/leucovorin chemotherapy on CpG methylation, or the confounding role of leukocyte heterogeneity: An illustration.

Genomics 2015 Dec 11;106(6):340-7. Epub 2015 Sep 11.

Department of Surgery, University Health Network, Toronto, Ontario M5G 2C4, Canada; Prosserman Centre for Health Research, Lunenfeld-Tanenbaum Research Institute, Toronto, Ontario M5G 1X5, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.ygeno.2015.09.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4722538PMC
December 2015

Corrigendum: genome-wide association study of colorectal cancer identifies six new susceptibility loci.

Authors:
Fredrick R Schumacher Stephanie L Schmit Shuo Jiao Christopher K Edlund Hansong Wang Ben Zhang Li Hsu Shu-Chen Huang Christopher P Fischer John F Harju Gregory E Idos Flavio Lejbkowicz Frank J Manion Kevin McDonnell Caroline E McNeil Marilena Melas Hedy S Rennert Wei Shi Duncan C Thomas David J Van Den Berg Carolyn M Hutter Aaron K Aragaki Katja Butterbach Bette J Caan Christopher S Carlson Stephen J Chanock Keith R Curtis Charles S Fuchs Manish Gala Edward L Giovannucci Stephanie M Gogarten Richard B Hayes Brian Henderson David J Hunter Rebecca D Jackson Laurence N Kolonel Charles Kooperberg Sébastien Küry Andrea LaCroix Cathy C Laurie Cecelia A Laurie Mathieu Lemire David Levine Jing Ma Karen W Makar Conghui Qu Darin Taverna Cornelia M Ulrich Kana Wu Suminori Kono Dee W West Sonja I Berndt Stephane Bezieau Hermann Brenner Peter T Campbell Andrew T Chan Jenny Chang-Claude Gerhard A Coetzee David V Conti David Duggan Jane C Figueiredo Barbara K Fortini Steven J Gallinger W James Gauderman Graham Giles Roger Green Robert Haile Tabitha A Harrison Michael Hoffmeister John L Hopper Thomas J Hudson Eric Jacobs Motoki Iwasaki Sun Ha Jee Mark Jenkins Wei-Hua Jia Amit Joshi Li Li Noralene M Lindor Keitaro Matsuo Victor Moreno Bhramar Mukherjee Polly A Newcomb John D Potter Leon Raskin Gad Rennert Stephanie Rosse Gianluca Severi Robert E Schoen Daniela Seminara Xiao-Ou Shu Martha L Slattery Shoichiro Tsugane Emily White Yong-Bing Xiang Brent W Zanke Wei Zheng Loic Le Marchand Graham Casey Stephen B Gruber Ulrike Peters

Nat Commun 2015 Oct 26;6:8739. Epub 2015 Oct 26.

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http://dx.doi.org/10.1038/ncomms9739DOI Listing
October 2015

Identification of a common variant with potential pleiotropic effect on risk of inflammatory bowel disease and colorectal cancer.

Carcinogenesis 2015 Sep 12;36(9):999-1007. Epub 2015 Jun 12.

Gastrointestinal Unit, Massachusetts General Hospital, Boston, MA, USA, Department of Epidemiology, Indiana University School of Public Health, Indianapolis, IN, USA,

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http://carcin.oxfordjournals.org/content/early/2015/07/07/ca
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http://www.carcin.oxfordjournals.org/lookup/doi/10.1093/carc
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http://dx.doi.org/10.1093/carcin/bgv086DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4573660PMC
September 2015

Genome-wide association study of colorectal cancer identifies six new susceptibility loci.

Authors:
Fredrick R Schumacher Stephanie L Schmit Shuo Jiao Christopher K Edlund Hansong Wang Ben Zhang Li Hsu Shu-Chen Huang Christopher P Fischer John F Harju Gregory E Idos Flavio Lejbkowicz Frank J Manion Kevin McDonnell Caroline E McNeil Marilena Melas Hedy S Rennert Wei Shi Duncan C Thomas David J Van Den Berg Carolyn M Hutter Aaron K Aragaki Katja Butterbach Bette J Caan Christopher S Carlson Stephen J Chanock Keith R Curtis Charles S Fuchs Manish Gala Edward L Giovannucci Stephanie M Gogarten Richard B Hayes Brian Henderson David J Hunter Rebecca D Jackson Laurence N Kolonel Charles Kooperberg Sébastien Küry Andrea LaCroix Cathy C Laurie Cecelia A Laurie Mathieu Lemire David Levine Jing Ma Karen W Makar Conghui Qu Darin Taverna Cornelia M Ulrich Kana Wu Suminori Kono Dee W West Sonja I Berndt Stéphane Bezieau Hermann Brenner Peter T Campbell Andrew T Chan Jenny Chang-Claude Gerhard A Coetzee David V Conti David Duggan Jane C Figueiredo Barbara K Fortini Steven J Gallinger W James Gauderman Graham Giles Roger Green Robert Haile Tabitha A Harrison Michael Hoffmeister John L Hopper Thomas J Hudson Eric Jacobs Motoki Iwasaki Sun Ha Jee Mark Jenkins Wei-Hua Jia Amit Joshi Li Li Noralene M Lindor Keitaro Matsuo Victor Moreno Bhramar Mukherjee Polly A Newcomb John D Potter Leon Raskin Gad Rennert Stephanie Rosse Gianluca Severi Robert E Schoen Daniela Seminara Xiao-Ou Shu Martha L Slattery Shoichiro Tsugane Emily White Yong-Bing Xiang Brent W Zanke Wei Zheng Loic Le Marchand Graham Casey Stephen B Gruber Ulrike Peters

Nat Commun 2015 Jul 7;6:7138. Epub 2015 Jul 7.

Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98124, USA.

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http://dx.doi.org/10.1038/ncomms8138DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4967357PMC
July 2015

Mendelian randomization study of height and risk of colorectal cancer.

Int J Epidemiol 2015 Apr 20;44(2):662-72. Epub 2015 May 20.

Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA, Department of Medicine and Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, TX, USA, Department of Epidemiology, School of Public Health, University of Washington, Seattle, WA, USA, Division of Cancer Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany, Department of Internal Medicine, University of Utah Health Sciences Center, Salt Lake City, UT, USA, Division of Gastroenterology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA, Channing Division of Network Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA, Estonian Genome Center, University of Tartu, Tartu, Estonia, Divisions of Endocrinology and Genetics and Center for Basic Translational Obesity Research, Boston Children's Hospital, Boston, MA, USA, Department of Genetics, Harvard Medical School, Boston, MA, USA, Broad Institute, Cambridge, MA, USA, Genetics of Complex Traits, University of Exeter Medical School, Exeter, UK, Queensland Brain Institute, University of Queensland, Brisbane, QLD, Australia, University of Queensland Diamantina Institute, Translation Research Institute, Brisbane, QLD, Australia, Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Lyngby, Denmark, Department of Medical Sciences, Uppsala University, Uppsala, Sweden, Department of Medicine, University of North Carolina School of Medicine, Chapel Hill, NC, USA, CHU Nantes, Service de Génétique Médicale, Nantes, France, Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA, Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA, Department of Epidemiology, Harvard School of Public Health, Boston, MA, USA, Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA, USC Norris

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http://dx.doi.org/10.1093/ije/dyv082DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4481609PMC
April 2015

Long-range epigenetic regulation is conferred by genetic variation located at thousands of independent loci.

Nat Commun 2015 Feb 26;6:6326. Epub 2015 Feb 26.

1] Ontario Institute for Cancer Research, Toronto, Ontario, Canada M5G 0A3 [2] Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada M5S 1A1 [3] Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada M5S 1A1.

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http://dx.doi.org/10.1038/ncomms7326DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4351585PMC
February 2015

Genetic predictors of circulating 25-hydroxyvitamin d and risk of colorectal cancer.

Cancer Epidemiol Biomarkers Prev 2013 Nov 27;22(11):2037-46. Epub 2013 Aug 27.

Authors' Affiliations: Program in Molecular and Genetic Epidemiology, Department of Epidemiology, Departments of Nutrition, and Biostatistics, Harvard School of Public Health; Department of Medicine, and Channing Division of Network Medicine, Brigham and Women's Hospital; Division of Gastroenterology, Massachusetts General Hospital; Department of Medicine, Harvard Medical School; Gastrointestinal Malignancy Program, and Medical-Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts; Public Health Sciences Division, Fred Hutchinson Cancer Research Center; Department of Epidemiology, University of Washington School of Public Health, Seattle, Washington; Division of Gastroenterology and Hepatology, University of North Carolina School of Medicine, Chapel Hill, North Carolina; Divisions of Cancer Epidemiology and Genetics, and Cancer Control and Population Sciences, National Cancer Institute, NIH, Bethesda; University of Maryland, School of Medicine, Baltimore, Maryland; Service de Génétique Médicale, CHU Nantes, Nantes, France; Divisions of Clinical Epidemiology and Aging Research and Cancer Epidemiology, German Cancer Research Center, Heidelberg, Germany; Division of Research, Kaiser Permanente Medical Care Program, Oakland; Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, California; Translational Genomics Research Institute, Phoenix, Arizona; Department of Surgery, Toronto General Hospital; Ontario Institute for Cancer Research; Departments of Medical Biophysics and Molecular Genetics, University of Toronto, Toronto; Faculty of Medicine, The University of Ottawa, Ottawa, Ontario, Canada; Department of Environmental Medicine, Division of Epidemiology, New York University School of Medicine, New York; Department of Social and Preventive Medicine, University of Buffalo, Buffalo, New York; Melborne School of Population Health, The University of Melbourne, Melbourne, Victoria, Australia; Epidemiology Pro

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http://dx.doi.org/10.1158/1055-9965.EPI-13-0209DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3818310PMC
November 2013

SBERIA: set-based gene-environment interaction test for rare and common variants in complex diseases.

Genet Epidemiol 2013 Jul 29;37(5):452-64. Epub 2013 May 29.

Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.

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http://dx.doi.org/10.1002/gepi.21735DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3713231PMC
July 2013

Identification of Genetic Susceptibility Loci for Colorectal Tumors in a Genome-Wide Meta-analysis.

Gastroenterology 2013 Apr 22;144(4):799-807.e24. Epub 2012 Dec 22.

Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109-1024, USA.

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http://kooperberg.fhcrc.org/papers/2013petersb.pdf
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http://linkinghub.elsevier.com/retrieve/pii/S001650851201846
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http://dx.doi.org/10.1053/j.gastro.2012.12.020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3636812PMC
April 2013

Genome-wide meta-analysis of common variant differences between men and women.

Authors:
Vesna Boraska Ana Jerončić Vincenza Colonna Lorraine Southam Dale R Nyholt Nigel William Rayner John R B Perry Daniela Toniolo Eva Albrecht Wei Ang Stefania Bandinelli Maja Barbalic Inês Barroso Jacques S Beckmann Reiner Biffar Dorret Boomsma Harry Campbell Tanguy Corre Jeanette Erdmann Tõnu Esko Krista Fischer Nora Franceschini Timothy M Frayling Giorgia Girotto Juan R Gonzalez Tamara B Harris Andrew C Heath Iris M Heid Wolfgang Hoffmann Albert Hofman Momoko Horikoshi Jing Hua Zhao Anne U Jackson Jouke-Jan Hottenga Antti Jula Mika Kähönen Kay-Tee Khaw Lambertus A Kiemeney Norman Klopp Zoltán Kutalik Vasiliki Lagou Lenore J Launer Terho Lehtimäki Mathieu Lemire Marja-Liisa Lokki Christina Loley Jian'an Luan Massimo Mangino Irene Mateo Leach Sarah E Medland Evelin Mihailov Grant W Montgomery Gerjan Navis John Newnham Markku S Nieminen Aarno Palotie Kalliope Panoutsopoulou Annette Peters Nicola Pirastu Ozren Polasek Karola Rehnström Samuli Ripatti Graham R S Ritchie Fernando Rivadeneira Antonietta Robino Nilesh J Samani So-Youn Shin Juha Sinisalo Johannes H Smit Nicole Soranzo Lisette Stolk Dorine W Swinkels Toshiko Tanaka Alexander Teumer Anke Tönjes Michela Traglia Jaakko Tuomilehto Armand Valsesia Wiek H van Gilst Joyce B J van Meurs Albert Vernon Smith Jorma Viikari Jacqueline M Vink Gerard Waeber Nicole M Warrington Elisabeth Widen Gonneke Willemsen Alan F Wright Brent W Zanke Lina Zgaga Michael Boehnke Adamo Pio d'Adamo Eco de Geus Ellen W Demerath Martin den Heijer Johan G Eriksson Luigi Ferrucci Christian Gieger Vilmundur Gudnason Caroline Hayward Christian Hengstenberg Thomas J Hudson Marjo-Riitta Järvelin Manolis Kogevinas Ruth J F Loos Nicholas G Martin Andres Metspalu Craig E Pennell Brenda W Penninx Markus Perola Olli Raitakari Veikko Salomaa Stefan Schreiber Heribert Schunkert Tim D Spector Michael Stumvoll André G Uitterlinden Sheila Ulivi Pim van der Harst Peter Vollenweider Henry Völzke Nicholas J Wareham H-Erich Wichmann James F Wilson Igor Rudan Yali Xue Eleftheria Zeggini

Hum Mol Genet 2012 Nov 27;21(21):4805-15. Epub 2012 Jul 27.

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1093/hmg/dds304DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471397PMC
November 2012

Coordinated conditional simulation with SLINK and SUP of many markers linked or associated to a trait in large pedigrees.

Hum Hered 2011 6;71(2):126-34. Epub 2011 Jul 6.

National Center for Biotechnology Information, National Institutes of Health, DHHS, Bethesda 20894, MD, USA. schaffer @ helix.nih.gov

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http://dx.doi.org/10.1159/000324177DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3136384PMC
January 2012

Successful identification of rare variants using oligogenic segregation analysis as a prioritizing tool for whole-exome sequencing studies.

BMC Proc 2011 Nov 29;5 Suppl 9:S11. Epub 2011 Nov 29.

Ontario Institute for Cancer Research, 101 College Street, Suite 800, Toronto, ON M5G 0A3, Canada.

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http://dx.doi.org/10.1186/1753-6561-5-S9-S11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3287833PMC
November 2011

Genetic variants and susceptibility to neurological complications following West Nile virus infection.

J Infect Dis 2011 Oct;204(7):1031-7

Department of Medicine, Clinical Epidemiology, and Biostatistics, McMaster University, Hamilton, Ontario.

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http://dx.doi.org/10.1093/infdis/jir493DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203390PMC
October 2011

Defining rare variants by their frequencies in controls may increase type I error.

Authors:
Mathieu Lemire

Nat Genet 2011 May;43(5):391-2; author reply 394-5

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http://dx.doi.org/10.1038/ng.818DOI Listing
May 2011

High resolution mapping in the major histocompatibility complex region identifies multiple independent novel loci for psoriatic arthritis.

Ann Rheum Dis 2011 Apr 17;70(4):690-4. Epub 2011 Jan 17.

Centre for Prognosis Studies in The Rheumatic Diseases, Toronto Western Research Institute, Toronto Western Hospital, 399 Bathurst Street, 1E-410B, Toronto, Ontario M5T 2S8, Canada.

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http://dx.doi.org/10.1136/ard.2010.133561DOI Listing
April 2011

Genetic risk factors for post-infectious irritable bowel syndrome following a waterborne outbreak of gastroenteritis.

Gastroenterology 2010 Apr 4;138(4):1502-13. Epub 2010 Jan 4.

Division of Gastroenterology, Department of Medicine, McGill University, Montréal, Québec, Canada.

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http://dx.doi.org/10.1053/j.gastro.2009.12.049DOI Listing
April 2010

On the association between rheumatoid arthritis and classical HLA class I and class II alleles predicted from single-nucleotide polymorphism data.

Authors:
Mathieu Lemire

BMC Proc 2009 Dec 15;3 Suppl 7:S33. Epub 2009 Dec 15.

Ontario Institute for Cancer Research, 101 College Street, Suite 800, MaRS Centre, South Tower, Toronto, ON M5G0A3 Canada.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2795931PMC
http://dx.doi.org/10.1186/1753-6561-3-s7-s33DOI Listing
December 2009

Using a higher criticism statistic to detect modest effects in a genome-wide study of rheumatoid arthritis.

BMC Proc 2009 Dec 15;3 Suppl 7:S40. Epub 2009 Dec 15.

Biostatistics Methodology Unit, Research Institute, Hospital for Sick Children, 555 University Avenue, Toronto, Ontario M5G 1X8, Canada.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2795939PMC
http://dx.doi.org/10.1186/1753-6561-3-s7-s40DOI Listing
December 2009

Influence of leukotriene gene polymorphisms on chronic rhinosinusitis.

BMC Med Genet 2008 Mar 26;9:21. Epub 2008 Mar 26.

Department of Otolaryngology-Head and Neck Surgery, McGill University, Montreal, QC, Canada.

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http://dx.doi.org/10.1186/1471-2350-9-21DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2292155PMC
March 2008

Association of urokinase-type plasminogen activator with asthma and atopy.

Am J Respir Crit Care Med 2007 Jun 15;175(11):1109-16. Epub 2007 Mar 15.

University of Montreal Community Genomic Medicine Centre, Chicoutimi University Hospital, Saguenay, Quebec, Canada.

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http://dx.doi.org/10.1164/rccm.200607-1012OCDOI Listing
June 2007

A common variant of the PAX2 gene is associated with reduced newborn kidney size.

J Am Soc Nephrol 2007 Jun 18;18(6):1915-21. Epub 2007 May 18.

Montreal Children's Hospital Research Institute, 4060 Saint Catherine West, PT-413, Montreal, Quebec, Canada.

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http://dx.doi.org/10.1681/ASN.2006101107DOI Listing
June 2007

SUP: an extension to SLINK to allow a larger number of marker loci to be simulated in pedigrees conditional on trait values.

Authors:
Mathieu Lemire

BMC Genet 2006 Jul 3;7:40. Epub 2006 Jul 3.

McGill University and Genome Quebec Innovation Centre, Montreal, Canada.

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http://dx.doi.org/10.1186/1471-2156-7-40DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1524809PMC
July 2006

Mapping common regulatory variants to human haplotypes.

Hum Mol Genet 2005 Dec 21;14(24):3963-71. Epub 2005 Nov 21.

McGill University and Genome Quebec Innovation Center, Montreal, Quebec, Canada.

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http://dx.doi.org/10.1093/hmg/ddi420DOI Listing
December 2005

A simple nonparametric multipoint procedure to test for linkage through mothers or fathers as well as imprinting effects in the presence of linkage.

Authors:
Mathieu Lemire

BMC Genet 2005 Dec 30;6 Suppl 1:S159. Epub 2005 Dec 30.

McGill University and Genome Quebec Innovation Centre, and Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada.

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http://dx.doi.org/10.1186/1471-2156-6-S1-S159DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1866775PMC
December 2005

Association of vitamin D receptor genetic variants with susceptibility to asthma and atopy.

Am J Respir Crit Care Med 2004 Nov 28;170(9):967-73. Epub 2004 Jul 28.

McGill Centre for the Study of Host Resistance, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada.

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http://dx.doi.org/10.1164/rccm.200403-412OCDOI Listing
November 2004

Transmission-ratio distortion and allele sharing in affected sib pairs: a new linkage statistic with reduced bias, with application to chromosome 6q25.3.

Am J Hum Genet 2004 Oct 20;75(4):571-86. Epub 2004 Aug 20.

McGill University and Genome Quebec Innovation Centre, and Departments of Human Genetics and Medicine, McGill University, Montreal, Quebec, Canada.

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http://linkinghub.elsevier.com/retrieve/pii/S000292970762709
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http://dx.doi.org/10.1086/424528DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1182045PMC
October 2004