Masatomo Kobayashi

Masatomo Kobayashi

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Masatomo Kobayashi

Masatomo Kobayashi

Publications by authors named "Masatomo Kobayashi"

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The chemical NJ15 affects hypocotyl elongation and shoot gravitropism via cutin polymerization.

Biosci Biotechnol Biochem 2018 Oct 18;82(10):1770-1779. Epub 2018 Jun 18.

a Department of Applied Biological Chemistry , The University of Tokyo , Tokyo , Japan.

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http://dx.doi.org/10.1080/09168451.2018.1484278DOI Listing
October 2018

Detecting mental fatigue from eye-tracking data gathered while watching video: Evaluation in younger and older adults.

Artif Intell Med 2018 09 17;91:39-48. Epub 2018 Jul 17.

IBM Research - Tokyo, 19-21, Nihonbashi, Hakozaki-cho, Chuo-ku, Tokyo 103-8510, Japan.

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http://dx.doi.org/10.1016/j.artmed.2018.06.005DOI Listing
September 2018

Characterization of a helminthosporic acid analog that is a selective agonist of gibberellin receptor.

Bioorg Med Chem Lett 2018 08 5;28(14):2465-2470. Epub 2018 Jun 5.

Department of Applied Biological Chemistry, The University of Tokyo, Tokyo 113-8657, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.bmcl.2018.06.005DOI Listing
August 2018

Monitoring Daily Physical Conditions of Older Adults Using Acoustic Features: A Preliminary Result.

Stud Health Technol Inform 2018 ;247:301-305

IBM Research - Tokyo, Tokyo, Japan.

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June 2018

Helminthosporic acid functions as an agonist for gibberellin receptor.

Biosci Biotechnol Biochem 2017 Nov 11;81(11):2152-2159. Epub 2017 Oct 11.

a Department of Applied Biological Chemistry , The University of Tokyo , Tokyo , Japan.

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https://www.tandfonline.com/doi/full/10.1080/09168451.2017.1
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http://dx.doi.org/10.1080/09168451.2017.1381018DOI Listing
November 2017

Genome-wide Association Study Reveals that the Aquaporin NIP1;1 Contributes to Variation in Hydrogen Peroxide Sensitivity in Arabidopsis thaliana.

Mol Plant 2017 08 14;10(8):1082-1094. Epub 2017 Jul 14.

Faculty of Applied Biological Sciences, Gifu University, Gifu 501-1193, Japan.

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http://dx.doi.org/10.1016/j.molp.2017.07.003DOI Listing
August 2017

Overexpression of LOV KELCH protein 2 confers dehydration tolerance and is associated with enhanced expression of dehydration-inducible genes in Arabidopsis thaliana.

Plant Cell Rep 2015 May 28;34(5):843-52. Epub 2015 Jan 28.

Department of Life Science, Faculty of Science, Gakushuin University, 1-5-1 Mejiro, Toshima-ku, Tokyo, 171-8588, Japan.

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http://link.springer.com/10.1007/s00299-015-1746-4
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http://dx.doi.org/10.1007/s00299-015-1746-4DOI Listing
May 2015

Epoxycarotenoid-mediated synthesis of abscisic acid in Physcomitrella patens implicating conserved mechanisms for acclimation to hyperosmosis in embryophytes.

New Phytol 2015 Apr 24;206(1):209-19. Epub 2014 Dec 24.

Graduate School of Science and Engineering, Saitama University, Shimo-Okubo 255, Sakura-ku, Saitama, 338-8570, Japan; Institute for Environmental Science and Technology, Saitama University, Shimo-Okubo 255, Sakura-ku, Saitama, 338-8570, Japan.

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http://dx.doi.org/10.1111/nph.13231DOI Listing
April 2015

SENSITIVE TO PROTON RHIZOTOXICITY1, CALMODULIN BINDING TRANSCRIPTION ACTIVATOR2, and other transcription factors are involved in ALUMINUM-ACTIVATED MALATE TRANSPORTER1 expression.

Plant Physiol 2015 Mar 27;167(3):991-1003. Epub 2015 Jan 27.

Applied Biological Sciences, Gifu University, Gifu 501-1193, Japan (M.T., Y.K., T.S., Y.Y.Y., H.K.);RIKEN BioResource Center, Ibaraki 305-0074, Japan (M.K., S.I.); andDivision of Biological Science, Graduate School of Science (M.N.), and The Center for Gene Research, Division of Biological Science (Y.T.), Nagoya University, Aichi 464-8602, Japan

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http://www.plantphysiol.org/lookup/doi/10.1104/pp.114.256552
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http://dx.doi.org/10.1104/pp.114.256552DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4348791PMC
March 2015

The maize DWARF1 encodes a gibberellin 3-oxidase and is dual localized to the nucleus and cytosol.

Plant Physiol 2014 Dec 23;166(4):2028-39. Epub 2014 Oct 23.

Institute of Plant Molecular Biology and Agricultural Biotechnology, State Key Laboratory of Agrobiotechnology, Chinese University of Hong Kong, Shatin, New Territories 852, Hong Kong (Y.C., M.H., Y.S., B.-C.T.);Key Laboratory of Plant Cell Engineering and Germplasm Innovation, Ministry of Education, School of Life Sciences, Shandong University, Jinan, Shandong 250100, People's Republic of China (M.H., B.-C.T.);Horticultural Sciences Department, University of Florida, Gainesville, Florida 32611 (L.L., S.W., D.R.M.); andExperimental Plant Division, RIKEN BioResource Center, Tsukuba, Ibaraki 305-0074, Japan (K.I., M.K.)

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http://www.plantphysiol.org/content/166/4/2028.full.pdf
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http://www.plantphysiol.org/cgi/doi/10.1104/pp.114.247486
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http://dx.doi.org/10.1104/pp.114.247486DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256885PMC
December 2014

Arabidopsis galactinol synthase AtGolS2 improves drought tolerance in the monocot model Brachypodium distachyon.

J Plant Physiol 2014 Aug 26;171(13):1127-31. Epub 2014 Apr 26.

Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.jplph.2014.04.007DOI Listing
August 2014

Identification of a STOP1-like protein in Eucalyptus that regulates transcription of Al tolerance genes.

Plant Sci 2014 Jun 5;223:8-15. Epub 2014 Mar 5.

Forest Technology Laboratories, Research & Development Division, Oji Paper Co., Ltd., 1-10-6 Shinonome, Koto-ku, Tokyo 135-8558, Japan. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S01689452140004
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http://dx.doi.org/10.1016/j.plantsci.2014.02.011DOI Listing
June 2014

STOP2 activates transcription of several genes for Al- and low pH-tolerance that are regulated by STOP1 in Arabidopsis.

Mol Plant 2014 Feb 10;7(2):311-22. Epub 2013 Aug 10.

Laboratory of Plant Cell Technology, Faculty of Applied Biological Sciences, Gifu University, Gifu 501-1193, Japan.

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http://dx.doi.org/10.1093/mp/sst116DOI Listing
February 2014

SABRE2: a database connecting plant EST/full-length cDNA clones with Arabidopsis information.

Plant Cell Physiol 2014 Jan 9;55(1):e5. Epub 2013 Dec 9.

RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki, 305-0074 Japan.

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http://dx.doi.org/10.1093/pcp/pct177DOI Listing
January 2014

Characterization of AtSTOP1 orthologous genes in tobacco and other plant species.

Plant Physiol 2013 Aug 7;162(4):1937-46. Epub 2013 Jun 7.

Plant Cell Technology, Faculty of Applied Biological Sciences, Gifu University, Gifu 501-1193, Japan.

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http://dx.doi.org/10.1104/pp.113.218958DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3729772PMC
August 2013

Characterization of the complex regulation of AtALMT1 expression in response to phytohormones and other inducers.

Plant Physiol 2013 Jun 26;162(2):732-40. Epub 2013 Apr 26.

Laboratory of Plant Cell Technology, Faculty of Applied Biological Sciences, Gifu University, Gifu 501-1193, Japan.

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http://dx.doi.org/10.1104/pp.113.218065DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3668066PMC
June 2013

Dissecting the genetic control of natural variation in salt tolerance of Arabidopsis thaliana accessions.

J Exp Bot 2010 Feb 15;61(4):1125-38. Epub 2010 Jan 15.

Department of Bioscience, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya, Tokyo 156-8502, Japan.

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http://dx.doi.org/10.1093/jxb/erp376DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2826654PMC
February 2010

Inefficient double-strand DNA break repair is associated with increased fasciation in Arabidopsis BRCA2 mutants.

J Exp Bot 2009 20;60(9):2751-61. Epub 2009 May 20.

Division of Plant Sciences, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1093/jxb/erp135DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2692019PMC
August 2009

Jasmonate-dependent plant defense restricts thrips performance and preference.

BMC Plant Biol 2009 Jul 27;9:97. Epub 2009 Jul 27.

Experimental Plant Division, RIKEN BioResource Center, Tsukuba 305-0074, Japan.

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http://dx.doi.org/10.1186/1471-2229-9-97DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2724403PMC
July 2009

STOP1 regulates multiple genes that protect arabidopsis from proton and aluminum toxicities.

Plant Physiol 2009 May 25;150(1):281-94. Epub 2009 Mar 25.

Laboratory of Plant Cell Technology, Faculty of Applied Biological Sciences, Gifu University, Gifu 501-1193, Japan.

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http://dx.doi.org/10.1104/pp.108.134700DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2675709PMC
May 2009

Ethylene modulates the role of NONEXPRESSOR OF PATHOGENESIS-RELATED GENES1 in cross talk between salicylate and jasmonate signaling.

Plant Physiol 2009 Apr 28;149(4):1797-809. Epub 2009 Jan 28.

Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands.

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http://dx.doi.org/10.1104/pp.108.133926DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2663751PMC
April 2009

Arabidopsis-thrips system for analysis of plant response to insect feeding.

Plant Signal Behav 2008 Jul;3(7):446-7

Department of Biological Systems; RIKEN BioResource Center; Tsukuba, Japan.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2634423PMC
http://dx.doi.org/10.4161/psb.3.7.5556DOI Listing
July 2008

Function of jasmonate in response and tolerance of Arabidopsis to thrip feeding.

Plant Cell Physiol 2008 Jan 28;49(1):68-80. Epub 2007 Nov 28.

Department of Biological Systems, RIKEN BioResource Center, Tsukuba, 305-0074 Japan.

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https://academic.oup.com/pcp/article-lookup/doi/10.1093/pcp/
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http://dx.doi.org/10.1093/pcp/pcm168DOI Listing
January 2008

Natural variation of Arabidopsis thaliana reveals that aluminum resistance and proton resistance are controlled by different genetic factors.

Theor Appl Genet 2007 Sep 28;115(5):709-19. Epub 2007 Jul 28.

Laboratory of Plant Cell Technology, Faculty of Applied Biological Sciences, Gifu University, Gifu, Gifu, 501-1193, Japan.

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http://link.springer.com/10.1007/s00122-007-0602-5
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http://dx.doi.org/10.1007/s00122-007-0602-5DOI Listing
September 2007

Chloroplast ribosome release factor 1 (AtcpRF1) is essential for chloroplast development.

Plant Mol Biol 2007 Jul 21;64(5):481-97. Epub 2007 Apr 21.

Faculty of Agriculture, University of Shizuoka, 836 Ohya, Suruga-ku, Shizuoka, 422-8529, Japan.

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http://dx.doi.org/10.1007/s11103-007-9166-7DOI Listing
July 2007

Differential microarray analysis of Drosophila mushroom body transcripts using chemical ablation.

Proc Natl Acad Sci U S A 2006 Sep 13;103(39):14417-22. Epub 2006 Sep 13.

Graduate School of Life and Environmental Sciences and Tsukuba Advanced Research Alliance, University of Tsukuba, Tsukuba 305-8572, Japan.

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http://dx.doi.org/10.1073/pnas.0606571103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1599978PMC
September 2006

Drosophila IKK-related kinase regulates nonapoptotic function of caspases via degradation of IAPs.

Cell 2006 Aug 3;126(3):583-96. Epub 2006 Aug 3.

Department of Genetics, Graduate School of Pharmaceutical Sciences, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.

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http://www.courseweb.uottawa.ca/BCH8109/images/Lectures%20an
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http://linkinghub.elsevier.com/retrieve/pii/S009286740600909
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http://dx.doi.org/10.1016/j.cell.2006.05.048DOI Listing
August 2006

Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice.

Plant Cell Physiol 2006 Jan 12;47(1):141-53. Epub 2005 Nov 12.

Biological Resources Division, Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Ibaraki.

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http://dx.doi.org/10.1093/pcp/pci230DOI Listing
January 2006

Cytological and molecular analyses of non-host resistance of Arabidopsis thaliana to Alternaria alternata.

Mol Plant Pathol 2005 Nov;6(6):615-27

Department of Biology, Tokyo Gakugei University, 4-1-1 Nukuikita-machi, Koganei-shi, Tokyo 184-8501, Japan.

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http://dx.doi.org/10.1111/j.1364-3703.2005.00310.xDOI Listing
November 2005

Dissection of the phosphorylation of rice DELLA protein, SLENDER RICE1.

Plant Cell Physiol 2005 Aug 23;46(8):1392-9. Epub 2005 Jun 23.

Bioscience and Biotechnology Center, Nagoya University, Nagoya, Aichi, 464-8601 Japan.

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http://dx.doi.org/10.1093/pcp/pci152DOI Listing
August 2005

An important role of phosphatidic acid in ABA signaling during germination in Arabidopsis thaliana.

Plant J 2005 Jul;43(1):107-17

Plant Molecular Biology Laboratory, RIKEN Tsukuba Institute, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1111/j.1365-313X.2005.02431.xDOI Listing
July 2005

[Plant cultured cell].

Tanpakushitsu Kakusan Koso 2004 Aug;49(11 Suppl):1551-7

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August 2004

A new lead compound for abscisic acid biosynthesis inhibitors targeting 9-cis-epoxycarotenoid dioxygenase.

Bioorg Med Chem Lett 2004 Jun;14(12):3033-6

RIKEN Tsukuba Institute, Koyadai 3-1-1, Ibaraki, Tsukuba 305-0074, Japan.

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http://dx.doi.org/10.1016/j.bmcl.2004.04.035DOI Listing
June 2004

In planta functions of the Arabidopsis cytokinin receptor family.

Proc Natl Acad Sci U S A 2004 Jun 27;101(23):8821-6. Epub 2004 May 27.

Department of Biology, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.

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http://dx.doi.org/10.1073/pnas.0402887101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC423279PMC
June 2004

Disposal of chloroplasts with abnormal function into the vacuole in Arabidopsis thaliana cotyledon cells.

Protoplasma 2004 Jun 22;223(2-4):229-32. Epub 2004 Jun 22.

School of Food and Nutritional Sciences, University of Shizuoka, 52-1 Yada, Shizuoka 422-8526, Japan.

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http://link.springer.com/content/pdf/10.1007/s00709-004-0037
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http://link.springer.com/10.1007/s00709-004-0037-7
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http://dx.doi.org/10.1007/s00709-004-0037-7DOI Listing
June 2004

A novel Arabidopsis gene TONSOKU is required for proper cell arrangement in root and shoot apical meristems.

Plant J 2004 May;38(4):673-84

Laboratory of Biochemistry, Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8601, Japan.

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http://dx.doi.org/10.1111/j.1365-313X.2004.02074.xDOI Listing
May 2004

Overexpression of LSH1, a member of an uncharacterised gene family, causes enhanced light regulation of seedling development.

Plant J 2004 Mar;37(5):694-706

Plant Function Exploration Team, Plant Functional Genomics Research Group, Genomic Sciences Center, RIKEN Yokohama Institute 1-7-22 Suyehirocho, Tsurumiku, Yokohama 230-0045, Kanagawa, Japan.

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http://dx.doi.org/10.1111/j.1365-313x.2003.01993.xDOI Listing
March 2004

[Bioresources for metabolic study of plant].

Tanpakushitsu Kakusan Koso 2003 Nov;48(15 Suppl):2218-24

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November 2003

Expression profiles of Arabidopsis phospholipase A IIA gene in response to biotic and abiotic stresses.

Plant Cell Physiol 2003 Nov;44(11):1246-52

Kobe University Graduate School of Science and Technology, 1-1 Rokkodai-cho, Nada-ku, Kobe, 657-8501 Japan.

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http://dx.doi.org/10.1093/pcp/pcg138DOI Listing
November 2003

Genetic manipulation of gibberellin metabolism in transgenic rice.

Nat Biotechnol 2003 Aug 13;21(8):909-13. Epub 2003 Jul 13.

Field Production Science Center, The University of Tokyo, 1-1-1 Midoricyo, Nishi-Tokyo 188-0002, Japan.

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http://dx.doi.org/10.1038/nbt847DOI Listing
August 2003

Functional analysis of the 37 kDa inner envelope membrane polypeptide in chloroplast biogenesis using a Ds-tagged Arabidopsis pale-green mutant.

Plant J 2003 Jun;34(5):719-31

Plant Functional Genomics Group, RIKEN (Institute of Physical and Chemical Research) Genomic Sciences Center, 1-7-22 Tsurumi-ku, Yokohama 230-0045, Japan.

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http://dx.doi.org/10.1046/j.1365-313x.2003.01763.xDOI Listing
June 2003

Identification of photorespiratory glutamate:glyoxylate aminotransferase (GGAT) gene in Arabidopsis.

Plant J 2003 Mar;33(6):975-87

Institute of Life Sciences, Ajinomoto Co., Inc., 1-1 Suzuki-cho, Kawasaki 210-8681, Japan.

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http://dx.doi.org/10.1046/j.1365-313x.2003.01688.xDOI Listing
March 2003

Engrailed cooperates with extradenticle and homothorax to repress target genes in Drosophila.

Development 2003 Feb;130(4):741-51

Department of Microbiology and Immunology, Kimmel Cancer Institute, Thomas Jefferson University, Philadelphia, PA 19107, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2692026PMC
http://dx.doi.org/10.1242/dev.00289DOI Listing
February 2003

Important roles of drought- and cold-inducible genes for galactinol synthase in stress tolerance in Arabidopsis thaliana.

Plant J 2002 Feb;29(4):417-26

Laboratory of Plant Molecular Biology, RIKEN Tsukuba Institute, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1046/j.0960-7412.2001.01227.xDOI Listing
February 2002

sickle, a novel Drosophila death gene in the reaper/hid/grim region, encodes an IAP-inhibitory protein.

Curr Biol 2002 Jan;12(2):125-30

The Center for Apoptosis Research, Department of Microbiology and Immunology, Kimmel Cancer Institute, Thomas Jefferson University, Philadelphia, PA 19107, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2743937PMC
http://dx.doi.org/10.1016/s0960-9822(01)00657-1DOI Listing
January 2002