Publications by authors named "Martin R Larsen"

100Publications

Quantitative phosphoproteomics uncovers synergy between DNA-PK and FLT3 inhibitors in acute myeloid leukaemia.

Leukemia 2020 Oct 16. Epub 2020 Oct 16.

Cancer Research Program, Hunter Medical Research Institute, School of Biomedical Sciences and Pharmacy Faculty of Health and Medicine, University of Newcastle, Callaghan, NSW, 2308, Australia.

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http://dx.doi.org/10.1038/s41375-020-01050-yDOI Listing
October 2020

Glutamate-glutamine homeostasis is perturbed in neurons and astrocytes derived from patient iPSC models of frontotemporal dementia.

Mol Brain 2020 Sep 14;13(1):125. Epub 2020 Sep 14.

Department of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Grønnegårdsvej 7, 1870, Frederiksberg C, Denmark.

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http://dx.doi.org/10.1186/s13041-020-00658-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7491073PMC
September 2020

Depolarization-dependent Induction of Site-specific Changes in Sialylation on linked Glycoproteins in Rat Nerve Terminals.

Mol Cell Proteomics 2020 09 9;19(9):1418-1435. Epub 2020 Jun 9.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark

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http://dx.doi.org/10.1074/mcp.RA119.001896DOI Listing
September 2020

Characterization of Signaling Pathways Associated with Pancreatic β-cell Adaptive Flexibility in Compensation of Obesity-linked Diabetes in Mice.

Mol Cell Proteomics 2020 06 7;19(6):971-993. Epub 2020 Apr 7.

Protein research group, Department of Biochemistry and Molecular Biology, University of Southern Denmark, DK-5230 Odense M, Denmark

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http://dx.doi.org/10.1074/mcp.RA119.001882DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7261816PMC
June 2020

Proteomics insights into the responses of Saccharomyces cerevisiae during mixed-culture alcoholic fermentation with Lachancea thermotolerans.

FEMS Microbiol Ecol 2019 09;95(9)

Department of Food Science, University of Copenhagen, Rolighedsvej 26, 1958 Frederiksberg C, Denmark.

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http://dx.doi.org/10.1093/femsec/fiz126DOI Listing
September 2019

Proteomic Analysis of Restored Insulin Production and Trafficking in Obese Diabetic Mouse Pancreatic Islets Following Euglycemia.

J Proteome Res 2019 09 31;18(9):3245-3258. Epub 2019 Jul 31.

Protein Research Group, Department of Biochemistry and Molecular Biology , University of Southern Denmark , DK-5230 Odense M , Denmark.

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http://dx.doi.org/10.1021/acs.jproteome.9b00160DOI Listing
September 2019

Distinct urinary glycoprotein signatures in prostate cancer patients.

Oncotarget 2018 Sep 4;9(69):33077-33097. Epub 2018 Sep 4.

Instituto de Ciências Biomédicas, Departamento de Parasitologia, Universidade de São Paulo, USP, São Paulo, Brazil.

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http://dx.doi.org/10.18632/oncotarget.26005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6145689PMC
September 2018

Proteomic Profiling of Mouse Epididymosomes Reveals their Contributions to Post-testicular Sperm Maturation.

Mol Cell Proteomics 2019 03 13;18(Suppl 1):S91-S108. Epub 2018 Sep 13.

¶School of Biomedical Sciences and Pharmacy, Faculty of Health and Medicine, The University of Newcastle, Callaghan, NSW 2308, Australia;

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http://dx.doi.org/10.1074/mcp.RA118.000946DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6427233PMC
March 2019

Snake Venom Extracellular vesicles (SVEVs) reveal wide molecular and functional proteome diversity.

Sci Rep 2018 08 13;8(1):12067. Epub 2018 Aug 13.

GlycoProteomics Laboratory, Department of Parasitology, ICB, University of São Paulo, São Paulo, Brazil.

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http://dx.doi.org/10.1038/s41598-018-30578-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6089973PMC
August 2018

Age-Dependent Changes in the Sarkosyl-Insoluble Proteome of APPSWE/PS1ΔE9 Transgenic Mice Implicate Dysfunctional Mitochondria in the Pathogenesis of Alzheimer's Disease.

J Alzheimers Dis 2018 ;64(4):1247-1259

Department of Neurobiology, University of Southern Denmark, Institute of Molecular Medicine, Odense, Denmark.

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http://dx.doi.org/10.3233/JAD-180197DOI Listing
July 2019

Quantitative Proteomics and Phosphoproteomics Analysis Revealed Different Regulatory Mechanisms of Halothane and Rendement Napole Genes in Porcine Muscle Metabolism.

J Proteome Res 2018 08 29;17(8):2834-2849. Epub 2018 Jun 29.

Department of Food Science, Faculty of Science , University of Copenhagen , DK-1958 Frederiksberg , Denmark.

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http://dx.doi.org/10.1021/acs.jproteome.8b00294DOI Listing
August 2018

NS1 codon usage adaptation to humans in pandemic Zika virus.

Mem Inst Oswaldo Cruz 2018 May 10;113(5):e170385. Epub 2018 May 10.

Universidade de São Paulo, Instituto de Ciências Biomédicas, Departamento de Microbiologia, Laboratório de Evolução Molecular e Bioinformática, São Paulo, SP, Brasil.

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http://dx.doi.org/10.1590/0074-02760170385DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5942634PMC
May 2018

SILAC-based phosphoproteomics reveals new PP2A-Cdc55-regulated processes in budding yeast.

Gigascience 2018 05;7(5)

Cell Cycle Group, Cancer Epigenetics and Biology Program, Institut d'Investigacions Biomèdica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.

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http://dx.doi.org/10.1093/gigascience/giy047DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967524PMC
May 2018

Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2).

PLoS Negl Trop Dis 2018 04 2;12(4):e0006351. Epub 2018 Apr 2.

Department of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil.

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http://dx.doi.org/10.1371/journal.pntd.0006351DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5897034PMC
April 2018

Dynamic Changes in the Protein Localization in the Nuclear Environment in Pancreatic β-Cell after Brief Glucose Stimulation.

J Proteome Res 2018 04 15;17(4):1664-1676. Epub 2018 Mar 15.

Protein Research Group, Department of Biochemistry and Molecular Biology , University of Southern Denmark , DK-5230 Odense M , Denmark.

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http://pubs.acs.org/doi/10.1021/acs.jproteome.7b00930
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http://dx.doi.org/10.1021/acs.jproteome.7b00930DOI Listing
April 2018

Characterizing disease-associated changes in post-translational modifications by mass spectrometry.

Expert Rev Proteomics 2018 03 1;15(3):245-258. Epub 2018 Feb 1.

a Department of Biochemistry and Molecular Biology , University of Southern Denmark , Odense , Denmark.

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http://dx.doi.org/10.1080/14789450.2018.1433036DOI Listing
March 2018

Characterization of Macrophage Endogenous S-Nitrosoproteome Using a Cysteine-Specific Phosphonate Adaptable Tag in Combination with TiO Chromatography.

J Proteome Res 2018 03 25;17(3):1172-1182. Epub 2018 Jan 25.

Immunomodulation Group, Navarrabiomed Biomedical Research Center, Navarra Institute for Health Research (IdiSNA) , Irunlarrea 3, 31008 Pamplona, Spain.

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http://dx.doi.org/10.1021/acs.jproteome.7b00812DOI Listing
March 2018

Proteomic Expression Changes in Large Cerebral Arteries After Experimental Subarachnoid Hemorrhage in Rat Are Regulated by the MEK-ERK1/2 Pathway.

J Mol Neurosci 2017 Aug 24;62(3-4):380-394. Epub 2017 Jul 24.

Department of Clinical Experimental Research, Glostrup Research Institute, Glostrup University Hospital, Nordre Ringvej 69, 2600, Glostrup, Denmark.

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http://dx.doi.org/10.1007/s12031-017-0944-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5541124PMC
August 2017

Elucidation of Altered Pathways in Tumor-Initiating Cells of Triple-Negative Breast Cancer: A Useful Cell Model System for Drug Screening.

Stem Cells 2017 08 23;35(8):1898-1912. Epub 2017 Jun 23.

Department of Cancer and Inflammation Research, Institute of Molecular Medicine, University of Southern Denmark, Odense, Denmark.

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http://dx.doi.org/10.1002/stem.2654DOI Listing
August 2017

Understanding Alzheimer's disease by global quantification of protein phosphorylation and sialylated N-linked glycosylation profiles: A chance for new biomarkers in neuroproteomics?

J Proteomics 2017 05 8;161:11-25. Epub 2017 Apr 8.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, 5230 Odense, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2017.04.003DOI Listing
May 2017

Alterations in the Cerebral Microvascular Proteome Expression Profile After Transient Global Cerebral Ischemia in Rat.

J Mol Neurosci 2017 Mar 8;61(3):396-411. Epub 2016 Dec 8.

Department of Clinical Experimental Research, Glostrup Research Institute, Rigshospitalet, Glostrup, Denmark.

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http://link.springer.com/10.1007/s12031-016-0875-8
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http://dx.doi.org/10.1007/s12031-016-0875-8DOI Listing
March 2017

Chronic low-dose-rate ionising radiation affects the hippocampal phosphoproteome in the ApoE-/- Alzheimer's mouse model.

Oncotarget 2016 Nov;7(44):71817-71832

Institute of Radiation Biology, Helmholtz Zentrum München, German Research Center for Environmental Health GmbH, Neuherberg, Germany.

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http://dx.doi.org/10.18632/oncotarget.12376DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5342125PMC
November 2016

A novel mass spectrometric strategy "BEMAP" reveals Extensive O-linked protein glycosylation in Enterotoxigenic Escherichia coli.

Sci Rep 2016 08 26;6:32016. Epub 2016 Aug 26.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230 Odense M, Denmark.

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http://dx.doi.org/10.1038/srep32016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000012PMC
August 2016

Simultaneous Enrichment of Cysteine-containing Peptides and Phosphopeptides Using a Cysteine-specific Phosphonate Adaptable Tag (CysPAT) in Combination with titanium dioxide (TiO2) Chromatography.

Mol Cell Proteomics 2016 10 8;15(10):3282-3296. Epub 2016 Jun 8.

From the ‡Department of Biochemistry and Molecular Biology, University of Southern Denmark; ‖Department of Parasitology, ICB, University of São Paulo, Brazil

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http://dx.doi.org/10.1074/mcp.M115.054551DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054350PMC
October 2016

An integrated proteomics approach shows synaptic plasticity changes in an APP/PS1 Alzheimer's mouse model.

Oncotarget 2016 Jun;7(23):33627-48

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.

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http://dx.doi.org/10.18632/oncotarget.9092DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5085108PMC
June 2016

Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4.

Data Brief 2016 Jun 14;7:814-33. Epub 2016 Mar 14.

I3S - Instituto de Investigação e Inovação em Saúde, University of Porto, Portugal; Institute of Molecular Pathology and Immunology of the University of Porto - IPATIMUP, Porto, Portugal; Institute of Biomedical Sciences of Abel Salazar - ICBAS, University of Porto, Portugal; Medical Faculty, University of Porto, Portugal.

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http://dx.doi.org/10.1016/j.dib.2016.03.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4816881PMC
June 2016

Proteomic Identification of Putative MicroRNA394 Target Genes in Arabidopsis thaliana Identifies Major Latex Protein Family Members Critical for Normal Development.

Mol Cell Proteomics 2016 06 11;15(6):2033-47. Epub 2016 Apr 11.

From the ‡School of Biological Sciences, The University of Sydney, Camperdown NSW 2006, Australia; ‡‡Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane QLD 4001, Australia.

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http://dx.doi.org/10.1074/mcp.M115.053124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5083100PMC
June 2016

High-performance hybrid Orbitrap mass spectrometers for quantitative proteome analysis: Observations and implications.

Proteomics 2016 Mar 1;16(6):907-14. Epub 2016 Mar 1.

Protein Research Group, VILLUM Center for Bioanalytical Sciences and Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark.

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http://dx.doi.org/10.1002/pmic.201400545DOI Listing
March 2016

Glycomic analysis of gastric carcinoma cells discloses glycans as modulators of RON receptor tyrosine kinase activation in cancer.

Biochim Biophys Acta 2016 Aug 22;1860(8):1795-808. Epub 2015 Dec 22.

I3S - Instituto de Investigação e Inovação em Saúde, University of Porto, Portugal; Institute of Molecular Pathology and Immunology of the University of Porto - IPATIMUP, Porto, Portugal; Institute of Biomedical Sciences of Abel Salazar - ICBAS, University of Porto, Portugal; Medical Faculty, University of Porto, Portugal. Electronic address:

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http://dx.doi.org/10.1016/j.bbagen.2015.12.016DOI Listing
August 2016

Improving the Phosphoproteome Coverage for Limited Sample Amounts Using TiO2-SIMAC-HILIC (TiSH) Phosphopeptide Enrichment and Fractionation.

Methods Mol Biol 2016 ;1355:161-77

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark.

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http://link.springer.com/content/pdf/10.1007%2F978-1-4939-30
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http://link.springer.com/10.1007/978-1-4939-3049-4_11
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http://dx.doi.org/10.1007/978-1-4939-3049-4_11DOI Listing
August 2016

Sequential Elution from IMAC (SIMAC): An Efficient Method for Enrichment and Separation of Mono- and Multi-phosphorylated Peptides.

Methods Mol Biol 2016 ;1355:147-60

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark.

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http://dx.doi.org/10.1007/978-1-4939-3049-4_10DOI Listing
August 2016

The Use of Titanium Dioxide for Selective Enrichment of Phosphorylated Peptides.

Methods Mol Biol 2016 ;1355:135-46

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark.

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http://dx.doi.org/10.1007/978-1-4939-3049-4_9DOI Listing
August 2016

Phosphopeptide Enrichment by Immobilized Metal Affinity Chromatography.

Methods Mol Biol 2016 ;1355:123-33

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230, Odense, Denmark.

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http://dx.doi.org/10.1007/978-1-4939-3049-4_8DOI Listing
August 2016

Quantitative Proteome Analysis Reveals Increased Content of Basement Membrane Proteins in Arteries From Patients With Type 2 Diabetes Mellitus and Lower Levels Among Metformin Users.

Circ Cardiovasc Genet 2015 Oct 14;8(5):727-35. Epub 2015 Sep 14.

From the Department of Biochemistry and Pharmacology, Odense University Hospital (S.A.R.P., L.P.K., H.C.B., P.S.J., M.B.-P., M.L.H., L.M.R.) and Protein Research Group, Department of Biochemistry and Molecular Biology (M.R.L.), University of Southern Denmark, Odense, Denmark; Center for Individualized Medicine in Arterial Diseases (CIMA), Center for Clinical Proteomics (CCP), Odense Patient Explorative Network (OPEN) (S.A.R.P., L.P.K., H.C.B., P.S.J., M.B.-P., M.L.H., L.M.R.) and Department of Cardiothoracic and Vascular Surgery (M.L.H.), Odense University Hospital, Odense, Denmark; and Institute of Pathology, Aarhus University Hospital, Aarhus, Denmark (P.S.N., T.S.).

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http://dx.doi.org/10.1161/CIRCGENETICS.115.001165DOI Listing
October 2015

Automated N-glycan profiling of a mutant Trypanosoma rangeli sialidase expressed in Pichia pastoris, using tandem mass spectrometry and bioinformatics.

Glycobiology 2015 Dec 24;25(12):1350-61. Epub 2015 Aug 24.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, 5230 Odense M, Denmark

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http://dx.doi.org/10.1093/glycob/cwv063DOI Listing
December 2015

Proteotranscriptomic Profiling of 231-BR Breast Cancer Cells: Identification of Potential Biomarkers and Therapeutic Targets for Brain Metastasis.

Mol Cell Proteomics 2015 Sep 3;14(9):2316-30. Epub 2015 Jun 3.

From the ‡School of Biomedical Sciences & Pharmacy and §Hunter Medical Research Institute, Faculty of Health and Medicine, University of Newcastle, Callaghan, New South Wales 2308, Australia

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http://dx.doi.org/10.1074/mcp.M114.046110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4563718PMC
September 2015

Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics.

BMC Genomics 2015 May 8;16:362. Epub 2015 May 8.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, 5230, Odense M, Denmark.

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http://dx.doi.org/10.1186/s12864-015-1549-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4423625PMC
May 2015

Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists.

J Proteomics 2015 May 30;121:56-66. Epub 2015 Mar 30.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, DK-5230 Odense M, Denmark. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S18743919150009
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http://dx.doi.org/10.1016/j.jprot.2015.03.013DOI Listing
May 2015

Important options available--from start to finish--for translating proteomics results to clinical chemistry.

Proteomics Clin Appl 2015 Feb 22;9(1-2):235-52. Epub 2015 Jan 22.

Department of Clinical Biochemistry, Immunology & Genetics, Statens Serum Institut, Copenhagen, Denmark; Department of Clinical Biochemistry and Pharmacology, Odense University Hospital, Odense, Denmark.

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http://dx.doi.org/10.1002/prca.201400137DOI Listing
February 2015

Integrated solid-phase extraction-capillary liquid chromatography (speLC) interfaced to ESI-MS/MS for fast characterization and quantification of protein and proteomes.

J Proteome Res 2014 Dec 20;13(12):6169-75. Epub 2014 Nov 20.

Department of Biochemistry and Molecular Biology, University of Southern Denmark , Campusvej 55, DK-5230 Odense M, Denmark.

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http://dx.doi.org/10.1021/pr5008575DOI Listing
December 2014

Elucidation of epithelial-mesenchymal transition-related pathways in a triple-negative breast cancer cell line model by multi-omics interactome analysis.

Integr Biol (Camb) 2014 Nov;6(11):1058-68

Department of Biochemistry and Molecular Biology, Faculty of Science, University of Southern Denmark, Odense, Denmark.

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http://dx.doi.org/10.1039/c4ib00137kDOI Listing
November 2014

Comparative proteomics and glycoproteomics reveal increased N-linked glycosylation and relaxed sequon specificity in Campylobacter jejuni NCTC11168 O.

J Proteome Res 2014 Nov 25;13(11):5136-50. Epub 2014 Aug 25.

School of Molecular Bioscience and ‡Charles Perkins Centre, The University of Sydney , Sydney, New South Wales 2006, Australia.

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http://dx.doi.org/10.1021/pr5005554DOI Listing
November 2014

Structural basis for phosphorylation and lysine acetylation cross-talk in a kinase motif associated with myocardial ischemia and cardioprotection.

J Biol Chem 2014 Sep 9;289(37):25890-906. Epub 2014 Jul 9.

From the Discipline of Pathology, School of Medical Sciences, University of Sydney, Sydney 2006, Australia, the School of Molecular Bioscience and the Charles Perkins Centre, University of Sydney, Sydney 2006, Australia, and

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http://dx.doi.org/10.1074/jbc.M114.556035DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4162189PMC
September 2014

Diversity within the O-linked protein glycosylation systems of acinetobacter species.

Mol Cell Proteomics 2014 Sep 10;13(9):2354-70. Epub 2014 Jun 10.

§Alberta Glycomics Centre and Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E9, Canada;

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http://dx.doi.org/10.1074/mcp.M114.038315DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4159654PMC
September 2014

Quantitative phosphoproteomic analysis of porcine muscle within 24 h postmortem.

J Proteomics 2014 Jun 24;106:125-39. Epub 2014 Apr 24.

Department of Food Science, Faculty of Science, University of Copenhagen, DK-1958 Frederiksberg, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2014.04.020DOI Listing
June 2014

Neuronal process structure and growth proteins are targets of heavy PTM regulation during brain development.

J Proteomics 2014 Apr 18;101:77-87. Epub 2014 Feb 18.

Protein Research Group, Department of Biochemistry and Molecular Biology, University of Southern Denmark, 5230 Odense, Denmark. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S18743919140005
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http://dx.doi.org/10.1016/j.jprot.2014.02.010DOI Listing
April 2014

Plasma proteome profiling of atherosclerotic disease manifestations reveals elevated levels of the cytoskeletal protein vinculin.

J Proteomics 2014 Apr 22;101:141-53. Epub 2013 Dec 22.

Department of Clinical Biochemistry and Pharmacology, Odense University Hospital, Odense, Denmark; Institute of Clinical Research, University of Southern Denmark, Odense, Denmark.

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https://linkinghub.elsevier.com/retrieve/pii/S18743919130064
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http://dx.doi.org/10.1016/j.jprot.2013.12.011DOI Listing
April 2014

Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.

J Proteome Res 2013 Dec 1;12(12):5791-800. Epub 2013 Nov 1.

Discipline of Pathology, School of Medical Sciences, The University of Sydney , Sydney 2006, Australia.

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http://dx.doi.org/10.1021/pr400783jDOI Listing
December 2013

Spatial and temporal effects in protein post-translational modification distributions in the developing mouse brain.

J Proteome Res 2014 Jan 27;13(1):260-7. Epub 2013 Aug 27.

Department of Biochemistry and Molecular Biology, University of Southern Denmark , Campusvej 55, Odense, DK 5230, Denmark.

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http://dx.doi.org/10.1021/pr4002977DOI Listing
January 2014

Proteins differentially expressed in human beta-cells-enriched pancreatic islet cultures and human insulinomas.

Mol Cell Endocrinol 2013 Dec 24;381(1-2):16-25. Epub 2013 Jul 24.

Instituto de Química, Departamento de Bioquímica, Universidade de São Paulo (USP), São Paulo, Brazil.

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http://dx.doi.org/10.1016/j.mce.2013.07.004DOI Listing
December 2013

Battle through signaling between wheat and the fungal pathogen Septoria tritici revealed by proteomics and phosphoproteomics.

Mol Cell Proteomics 2013 Sep 29;12(9):2497-508. Epub 2013 May 29.

Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, 1871 Frederiksberg C, Denmark.

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http://dx.doi.org/10.1074/mcp.M113.027532DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3769326PMC
September 2013

Changes in phosphorylation of myofibrillar proteins during postmortem development of porcine muscle.

Food Chem 2012 Oct 10;134(4):1999-2006. Epub 2012 Apr 10.

Department of Food Science, Faculty of Life Sciences, University of Copenhagen, DK-1958, Frederiksberg, Denmark.

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http://dx.doi.org/10.1016/j.foodchem.2012.03.132DOI Listing
October 2012

Technologies and challenges in large-scale phosphoproteomics.

Proteomics 2013 Mar;13(6):910-31

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark.

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http://dx.doi.org/10.1002/pmic.201200484DOI Listing
March 2013

Quantitative phosphoproteomic analysis of early alterations in protein phosphorylation by 2,3,7,8-tetrachlorodibenzo-p-dioxin.

J Proteome Res 2013 Feb 24;12(2):866-82. Epub 2013 Jan 24.

Institute of Molecular Toxicology and Pharmacology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.

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http://pubs.acs.org/doi/10.1021/pr3009429
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http://dx.doi.org/10.1021/pr3009429DOI Listing
February 2013

TiSH--a robust and sensitive global phosphoproteomics strategy employing a combination of TiO2, SIMAC, and HILIC.

J Proteomics 2012 Oct 18;75(18):5749-61. Epub 2012 Aug 18.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark.

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https://linkinghub.elsevier.com/retrieve/pii/S18743919120060
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http://dx.doi.org/10.1016/j.jprot.2012.08.007DOI Listing
October 2012

Modification of the Campylobacter jejuni N-linked glycan by EptC protein-mediated addition of phosphoethanolamine.

J Biol Chem 2012 Aug 2;287(35):29384-96. Epub 2012 Jul 2.

School of Molecular Bioscience, and Discipline of Pathology (School of Medical Sciences), The University of Sydney, Australia 2006.

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http://www.jbc.org/lookup/doi/10.1074/jbc.M112.380212
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3436159PMC
August 2012

Performance of isobaric and isotopic labeling in quantitative plant proteomics.

J Proteome Res 2012 May 9;11(5):3046-52. Epub 2012 Apr 9.

Proteomic Unit, Institute of Chemistry, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.

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http://pubs.acs.org/doi/10.1021/pr300192f
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May 2012

Chemical deamidation: a common pitfall in large-scale N-linked glycoproteomic mass spectrometry-based analyses.

J Proteome Res 2012 Mar 22;11(3):1949-57. Epub 2012 Feb 22.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Denmark.

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http://pubs.acs.org/doi/10.1021/pr2011268
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March 2012

Postmortem changes in pork muscle protein phosphorylation in relation to the RN genotype.

J Agric Food Chem 2011 Nov 14;59(21):11608-15. Epub 2011 Oct 14.

Department of Food Science, University of Copenhagen, Rolighedsvej 30, DK-1958 Frederiksberg C, Denmark.

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http://dx.doi.org/10.1021/jf201936hDOI Listing
November 2011

Multidimensional strategy for sensitive phosphoproteomics incorporating protein prefractionation combined with SIMAC, HILIC, and TiO(2) chromatography applied to proximal EGF signaling.

J Proteome Res 2011 Dec 26;10(12):5383-97. Epub 2011 Oct 26.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, DK-5230, Odense, Denmark.

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http://pubs.acs.org/doi/abs/10.1021/pr200641x
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December 2011

Titanium dioxide as chemo-affinity chromatographic sorbent of biomolecular compounds--applications in acidic modification-specific proteomics.

J Proteomics 2011 Dec 4;75(2):317-28. Epub 2011 Aug 4.

Department of Biochemistry and Molecular Biology, University of Southern Denmark.

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http://dx.doi.org/10.1016/j.jprot.2011.07.024DOI Listing
December 2011

Gel-based phosphoproteomics analysis of sarcoplasmic proteins in postmortem porcine muscle with pH decline rate and time differences.

Proteomics 2011 Oct 31;11(20):4063-76. Epub 2011 Aug 31.

Department of Food Science, Faculty of Life Sciences, University of Copenhagen, Denmark.

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http://dx.doi.org/10.1002/pmic.201100173DOI Listing
October 2011

Titanium dioxide enrichment of sialic acid-containing glycopeptides.

Methods Mol Biol 2011 ;753:309-22

Department of Biochemistry and Molecular Biology, University of Southern Denmark, DK-5230, Odense, Denmark.

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http://dx.doi.org/10.1007/978-1-61779-148-2_21DOI Listing
September 2011

A novel post-translational modification in nerve terminals: O-linked N-acetylglucosamine phosphorylation.

J Proteome Res 2011 Jun 2;10(6):2725-33. Epub 2011 May 2.

Cell Signalling Unit, Children's Medical Research Institute, The University of Sydney, Westmead, Australia.

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http://dx.doi.org/10.1021/pr1011153DOI Listing
June 2011

Phosphorylation of dynamin II at serine-764 is associated with cytokinesis.

Biochim Biophys Acta 2011 Oct 29;1813(10):1689-99. Epub 2010 Dec 29.

Children's Medical Research Institute, The University of Sydney, Westmead, NSW 2145, Australia.

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http://dx.doi.org/10.1016/j.bbamcr.2010.12.018DOI Listing
October 2011

Purification and identification of O-GlcNAc-modified peptides using phosphate-based alkyne CLICK chemistry in combination with titanium dioxide chromatography and mass spectrometry.

J Proteome Res 2011 Apr 22;10(4):1449-58. Epub 2011 Feb 22.

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230 Odense M, Denmark.

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April 2011