Martin Grube

Martin Grube

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Integrative taxonomy confirms three species of (Arthoniaceae) in Norway.

MycoKeys 2020 23;62:27-51. Epub 2020 Jan 23.

NTNU University Museum, Norwegian University of Science and Technology, 7491 Trondheim, Norway.

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http://dx.doi.org/10.3897/mycokeys.62.48480DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992689PMC
January 2020

Phylogenetic relationships of rock-inhabiting black fungi belonging to the widespread genera Lichenothelia and Saxomyces.

Mycologia 2019 Jan-Feb;111(1):127-160. Epub 2019 Feb 6.

a Department of Life Sciences , University of Trieste , via Giorgieri 10, 34127 Trieste , Italy.

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http://dx.doi.org/10.1080/00275514.2018.1543510DOI Listing
May 2019

Bacterial communities in an optional lichen symbiosis are determined by substrate, not algal photobionts.

FEMS Microbiol Ecol 2019 Mar;95(3)

Department of Botany, Swedish Museum of Natural History, PO Box 50007, SE-10405 Stockholm, Sweden.

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http://dx.doi.org/10.1093/femsec/fiz012DOI Listing
March 2019

Plasticity of a holobiont: desiccation induces fasting-like metabolism within the lichen microbiota.

ISME J 2019 02 11;13(2):547-556. Epub 2018 Oct 11.

Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, 8010, Graz, Austria.

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http://www.nature.com/articles/s41396-018-0286-7
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http://dx.doi.org/10.1038/s41396-018-0286-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6331575PMC
February 2019

Enterobacteriaceae dominate the core microbiome and contribute to the resistome of arugula (Eruca sativa Mill.).

Microbiome 2019 01 29;7(1):13. Epub 2019 Jan 29.

Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, 8010, Graz, Austria.

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http://dx.doi.org/10.1186/s40168-019-0624-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6352427PMC
January 2019

Adaptions of Lichen Microbiota Functioning Under Persistent Exposure to Arsenic Contamination.

Front Microbiol 2018 30;9:2959. Epub 2018 Nov 30.

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

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http://dx.doi.org/10.3389/fmicb.2018.02959DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6283889PMC
November 2018

Leaves of Indoor Ornamentals Are Biodiversity and Functional Hotspots for Fungi.

Front Microbiol 2018 1;9:2343. Epub 2018 Oct 1.

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

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https://www.frontiersin.org/article/10.3389/fmicb.2018.02343
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http://dx.doi.org/10.3389/fmicb.2018.02343DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6174238PMC
October 2018

Enforced fungal-algal symbioses in alginate spheres.

FEMS Microbiol Lett 2018 07;365(14)

Institut of Plant Sciences, University of Graz, Holteigasse 6, 8010 Graz, Austria.

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http://dx.doi.org/10.1093/femsle/fny115DOI Listing
July 2018

Marine cyanolichens from different littoral zones are associated with distinct bacterial communities.

PeerJ 2018 17;6:e5208. Epub 2018 Jul 17.

Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Sorbonne Université, CNRS, Banyuls sur mer, France.

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https://peerj.com/articles/5208
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http://dx.doi.org/10.7717/peerj.5208DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6054067PMC
July 2018

Considerations and consequences of allowing DNA sequence data as types of fungal taxa.

Authors:
Juan Carlos Zamora Måns Svensson Roland Kirschner Ibai Olariaga Svengunnar Ryman Luis Alberto Parra József Geml Anna Rosling Slavomír Adamčík Teuvo Ahti M Catherine Aime A Martyn Ainsworth László Albert Edgardo Albertó Alberto Altés García Dmitry Ageev Reinhard Agerer Begoña Aguirre-Hudson Joe Ammirati Harry Andersson Claudio Angelini Vladimír Antonín Takayuki Aoki André Aptroot Didier Argaud Blanca Imelda Arguello Sosa Arne Aronsen Ulf Arup Bita Asgari Boris Assyov Violeta Atienza Ditte Bandini João Luís Baptista-Ferreira Hans-Otto Baral Tim Baroni Robert Weingart Barreto Henry Beker Ann Bell Jean-Michel Bellanger Francesco Bellù Martin Bemmann Mika Bendiksby Egil Bendiksen Katriina Bendiksen Lajos Benedek Anna Bérešová-Guttová Franz Berger Reinhard Berndt Annarosa Bernicchia Alona Yu Biketova Enrico Bizio Curtis Bjork Teun Boekhout David Boertmann Tanja Böhning Florent Boittin Carlos G Boluda Menno W Boomsluiter Jan Borovička Tor Erik Brandrud Uwe Braun Irwin Brodo Tatiana Bulyonkova Harold H Burdsall Bart Buyck Ana Rosa Burgaz Vicent Calatayud Philippe Callac Emanuele Campo Massimo Candusso Brigitte Capoen Joaquim Carbó Matteo Carbone Rafael F Castañeda-Ruiz Michael A Castellano Jie Chen Philippe Clerc Giovanni Consiglio Gilles Corriol Régis Courtecuisse Ana Crespo Cathy Cripps Pedro W Crous Gladstone Alves da Silva Meiriele da Silva Marjo Dam Nico Dam Frank Dämmrich Kanad Das Linda Davies Eske De Crop Andre De Kesel Ruben De Lange Bárbara De Madrignac Bonzi Thomas Edison E Dela Cruz Lynn Delgat Vincent Demoulin Dennis E Desjardin Paul Diederich Bálint Dima Maria Martha Dios Pradeep Kumar Divakar Clovis Douanla-Meli Brian Douglas Elisandro Ricardo Drechsler-Santos Paul S Dyer Ursula Eberhardt Damien Ertz Fernando Esteve-Raventós Javier Angel Etayo Salazar Vera Evenson Guillaume Eyssartier Edit Farkas Alain Favre Anna G Fedosova Mario Filippa Péter Finy Adam Flakus Simón Fos Jacques Fournier André Fraiture Paolo Franchi Ana Esperanza Franco Molano Gernot Friebes Andreas Frisch Alan Fryday Giuliana Furci Ricardo Galán Márquez Matteo Garbelotto Joaquina María García-Martín Mónica A García Otálora Dania García Sánchez Alain Gardiennet Sigisfredo Garnica Isaac Garrido Benavent Genevieve Gates Alice da Cruz Lima Gerlach Masoomeh Ghobad-Nejhad Tatiana B Gibertoni Tine Grebenc Irmgard Greilhuber Bella Grishkan Johannes Z Groenewald Martin Grube Gérald Gruhn Cécile Gueidan Gro Gulden Luis Fp Gusmão Josef Hafellner Michel Hairaud Marek Halama Nils Hallenberg Roy E Halling Karen Hansen Christoffer Bugge Harder Jacob Heilmann-Clausen Stip Helleman Alain Henriot Margarita Hernandez-Restrepo Raphaël Herve Caroline Hobart Mascha Hoffmeister Klaus Høiland Jan Holec Håkon Holien Karen Hughes Vit Hubka Seppo Huhtinen Boris Ivančević Marian Jagers Walter Jaklitsch AnnaElise Jansen Ruvishika S Jayawardena Thomas Stjernegaard Jeppesen Mikael Jeppson Peter Johnston Per Magnus Jørgensen Ingvar Kärnefelt Liudmila B Kalinina Gintaras Kantvilas Mitko Karadelev Taiga Kasuya Ivona Kautmanová Richard W Kerrigan Martin Kirchmair Anna Kiyashko Dániel G Knapp Henning Knudsen Kerry Knudsen Tommy Knutsson Miroslav Kolařík Urmas Kõljalg Alica Košuthová Attila Koszka Heikki Kotiranta Vera Kotkova Ondřej Koukol Jiří Kout Gábor M Kovács Martin Kříž Åsa Kruys Viktor Kučera Linas Kudzma Francisco Kuhar Martin Kukwa T K Arun Kumar Vladimír Kunca Ivana Kušan Thomas W Kuyper Carlos Lado Thomas Læssøe Patrice Lainé Ewald Langer Ellen Larsson Karl-Henrik Larsson Gary Laursen Christian Lechat Serena Lee James C Lendemer Laura Levin Uwe Lindemann Håkan Lindström Xingzhong Liu Regulo Carlos Llarena Hernandez Esteve Llop Csaba Locsmándi Deborah Jean Lodge Michael Loizides László Lőkös Jennifer Luangsa-Ard Matthias Lüderitz Thorsten Lumbsch Matthias Lutz Dan Mahoney Ekaterina Malysheva Vera Malysheva Patinjareveettil Manimohan Yasmina Marin-Felix Guilhermina Marques Rubén Martínez-Gil Guy Marson Gerardo Mata P Brandon Matheny Geir Harald Mathiassen Neven Matočec Helmut Mayrhofer Mehdi Mehrabi Ireneia Melo Armin Mešić Andrew S Methven Otto Miettinen Ana M Millanes Romero Andrew N Miller James K Mitchell Roland Moberg Pierre-Arthur Moreau Gabriel Moreno Olga Morozova Asunción Morte Lucia Muggia Guillermo Muñoz González Leena Myllys István Nagy László G Nagy Maria Alice Neves Tuomo Niemelä Pier Luigi Nimis Nicolas Niveiro Machiel E Noordeloos Anders Nordin Sara Raouia Noumeur Yuri Novozhilov Jorinde Nuytinck Esteri Ohenoja Patricia Oliveira Fiuza Alan Orange Alexander Ordynets Beatriz Ortiz-Santana Leticia Pacheco Ferenc Pál-Fám Melissa Palacio Zdeněk Palice Viktor Papp Kadri Pärtel Julia Pawlowska Aurelia Paz Ursula Peintner Shaun Pennycook Olinto Liparini Pereira Pablo Pérez Daniëls Miquel À Pérez-De-Gregorio Capella Carlos Manuel Pérez Del Amo Sergio Pérez Gorjón Sergio Pérez-Ortega Israel Pérez-Vargas Brian A Perry Jens H Petersen Ronald H Petersen Donald H Pfister Chayanard Phukhamsakda Marcin Piątek Meike Piepenbring Raquel Pino-Bodas Juan Pablo Pinzón Esquivel Paul Pirot Eugene S Popov Orlando Popoff María Prieto Álvaro Christian Printzen Nadezhda Psurtseva Witoon Purahong Luis Quijada Gerhard Rambold Natalia A Ramírez Huzefa Raja Olivier Raspé Tania Raymundo Martina Réblová Yury A Rebriev Juan de Dios Reyes García Miguel Ángel Ribes Ripoll Franck Richard Mike J Richardson Víctor J Rico Gerardo Lucio Robledo Flavia Rodrigues Barbosa Cristina Rodriguez-Caycedo Pamela Rodriguez-Flakus Anna Ronikier Luis Rubio Casas Katerina Rusevska Günter Saar Irja Saar Isabel Salcedo Sergio M Salcedo Martínez Carlos A Salvador Montoya Santiago Sánchez-Ramírez J Vladimir Sandoval-Sierra Sergi Santamaria Josiane Santana Monteiro Hans Josef Schroers Barbara Schulz Geert Schmidt-Stohn Trond Schumacher Beatrice Senn-Irlet Hana Ševčíková Oleg Shchepin Takashi Shirouzu Anton Shiryaev Klaus Siepe Esteban B Sir Mohammad Sohrabi Karl Soop Viacheslav Spirin Toby Spribille Marc Stadler Joost Stalpers Soili Stenroos Ave Suija Stellan Sunhede Sten Svantesson Sigvard Svensson Tatyana Yu Svetasheva Krzysztof Świerkosz Heidi Tamm Hatira Taskin Adrien Taudière Jan-Olof Tedebrand Raúl Tena Lahoz Marina Temina Arne Thell Marco Thines Göran Thor Holger Thüs Leif Tibell Sanja Tibell Einar Timdal Zdenko Tkalčec Tor Tønsberg Gérard Trichies Dagmar Triebel Andrei Tsurykau Rodham E Tulloss Veera Tuovinen Miguel Ulloa Sosa Carlos Urcelay François Valade Ricardo Valenzuela Garza Pieter van den Boom Nicolas Van Vooren Aida M Vasco-Palacios Jukka Vauras Juan Manuel Velasco Santos Else Vellinga Annemieke Verbeken Per Vetlesen Alfredo Vizzini Hermann Voglmayr Sergey Volobuev Wolfgang von Brackel Elena Voronina Grit Walther Roy Watling Evi Weber Mats Wedin Øyvind Weholt Martin Westberg Eugene Yurchenko Petr Zehnálek Huang Zhang Mikhail P Zhurbenko Stefan Ekman

IMA Fungus 2018 Jun 24;9(1):167-175. Epub 2018 May 24.

Museum of Evolution, Uppsala University, Norbyvägen 16, 75236 Uppsala, Sweden.

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http://www.ingentaconnect.com/content/10.5598/imafungus.2018
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http://dx.doi.org/10.5598/imafungus.2018.09.01.10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048565PMC
June 2018

Fungal Diversity in Lichens: From Extremotolerance to Interactions with Algae.

Life (Basel) 2018 May 22;8(2). Epub 2018 May 22.

Institute of Biology, Karl-Franzens University of Graz, Holteigasse 6, 8010 Graz, Austria.

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http://dx.doi.org/10.3390/life8020015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6027233PMC
May 2018

Chemical analysis of the Alphaproteobacterium strain MOLA1416 associated with the marine lichen Lichina pygmaea.

Phytochemistry 2018 Jan 5;145:57-67. Epub 2017 Nov 5.

UMR CNRS 6226, Institut des Sciences Chimiques de Rennes, Equipe CORINT "Chimie Organique et Interfaces", UFR Sciences Pharmaceutiques et Biologiques, Univ. Rennes 1, Université Bretagne Loire, 2 Avenue du Pr. Léon Bernard, F-35043, Rennes, France. Electronic address:

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http://dx.doi.org/10.1016/j.phytochem.2017.10.005DOI Listing
January 2018

ITS1 metabarcoding highlights low specificity of lichen mycobiomes at a local scale.

Mol Ecol 2017 Sep 24;26(18):4811-4830. Epub 2017 Aug 24.

Department of Life Sciences, University of Trieste, Trieste, Italy.

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http://dx.doi.org/10.1111/mec.14244DOI Listing
September 2017

Deciphering functional diversification within the lichen microbiota by meta-omics.

Microbiome 2017 07 19;5(1):82. Epub 2017 Jul 19.

Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, 8010, Graz, Austria.

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http://dx.doi.org/10.1186/s40168-017-0303-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5518139PMC
July 2017

Differential sharing and distinct co-occurrence networks among spatially close bacterial microbiota of bark, mosses and lichens‬‬.

Mol Ecol 2017 May 13;26(10):2826-2838. Epub 2017 Mar 13.

Institute of Plant Sciences, University of Graz, Holteigasse 6, 8010, Graz, Austria.

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http://dx.doi.org/10.1111/mec.14070DOI Listing
May 2017

Effects of Growth Media on the Diversity of Culturable Fungi from Lichens.

Molecules 2017 May 17;22(5). Epub 2017 May 17.

Institute of Plant Science, Karl-Franzens University of Graz, Holteigasse 6, 8010 Graz, Austria.

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http://dx.doi.org/10.3390/molecules22050824DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6154544PMC
May 2017

Accuracy of commercial kits and published primer pairs for the detection of periodontopathogens.

Clin Oral Investig 2016 Dec 29;20(9):2515-2528. Epub 2016 Mar 29.

Division of Orthodontics and Maxillofacial Orthopedics, Department of Dentistry and Maxillofacial Surgery, Medical University of Graz, Billrothgasse 4, A-8010, Graz, Austria.

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http://dx.doi.org/10.1007/s00784-016-1748-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5119851PMC
December 2016

Lichenized Fungi and the Evolution of Symbiotic Organization.

Microbiol Spectr 2016 12;4(6)

Department of Botany, Swedish Museum of Natural History, 104 05 Stockholm, Sweden.

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http://dx.doi.org/10.1128/microbiolspec.FUNK-0011-2016DOI Listing
December 2016

Arthonia parietinaria - A common but frequently misunderstood lichenicolous fungus on species of the Xanthoria parietina-group.

Fungal Biol 2016 11;120(11):1341-1353

Institut für Pflanzenwissenschaften, NaWi Graz, Karl-Franzens-Universität, Holteigasse 6, 8010 Graz, Austria.

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http://dx.doi.org/10.1016/j.funbio.2016.06.009DOI Listing
November 2016

High Life Expectancy of Bacteria on Lichens.

Microb Ecol 2016 10 27;72(3):510-3. Epub 2016 Jul 27.

Institute of Plant Sciences, University of Graz, Holteigasse 6, 8010, Graz, Austria.

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http://dx.doi.org/10.1007/s00248-016-0818-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5023722PMC
October 2016

Schizoxylon as an experimental model for studying interkingdom symbiosis.

FEMS Microbiol Ecol 2016 10 8;92(10). Epub 2016 Aug 8.

Department of Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-10405 Stockholm, Sweden.

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http://dx.doi.org/10.1093/femsec/fiw165DOI Listing
October 2016

From Mouth to Model: Combining and Oral Biofilm Growth.

Front Microbiol 2016 21;7:1448. Epub 2016 Sep 21.

Institute of Plant Sciences, University of Graz Graz, Austria.

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http://dx.doi.org/10.3389/fmicb.2016.01448DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5030783PMC
September 2016

Review - Lichen-Associated Bacteria as a Hot Spot of Chemodiversity: Focus on Uncialamycin, a Promising Compound for Future Medicinal Applications.

Planta Med 2016 Aug 24;82(13):1143-52. Epub 2016 May 24.

UMR CNRS 6226, Institut des Sciences Chimiques de Rennes, Equipe PNSCM "Produits naturels - Synthèses - Chimie Médicinale", UFR Sciences Pharmaceutiques et Biologiques, Univ. Rennes 1, Université Européenne de Bretagne, Rennes, France.

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http://dx.doi.org/10.1055/s-0042-105571DOI Listing
August 2016

Microbiome change by symbiotic invasion in lichens.

Environ Microbiol 2016 05 14;18(5):1428-39. Epub 2015 Oct 14.

Institute of Plant Sciences, University of Graz, Holteigasse 6, Graz, A-8010, Austria.

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http://dx.doi.org/10.1111/1462-2920.13032DOI Listing
May 2016

The plant microbiome explored: implications for experimental botany.

J Exp Bot 2016 Feb 7;67(4):995-1002. Epub 2015 Nov 7.

Graz University of Technology, Institute of Environmental Biotechnology, 8010 Graz, Austria Pacific Northwest National Laboratory, Biological Sciences Division, Richland, WA 99352, USA.

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http://jxb.oxfordjournals.org/content/early/2015/11/06/jxb.e
Web Search
http://jxb.oxfordjournals.org/lookup/doi/10.1093/jxb/erv466
Publisher Site
http://dx.doi.org/10.1093/jxb/erv466DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395086PMC
February 2016

Are lichens potential natural reservoirs for plant pathogens?

Mol Plant Pathol 2016 Feb;17(2):143-5

Laboratory of Phytopathology, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium.

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http://dx.doi.org/10.1111/mpp.12344DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6638420PMC
February 2016

Understanding Microbial Multi-Species Symbioses.

Front Microbiol 2016 18;7:180. Epub 2016 Feb 18.

Institute of Plant Sciences, University of Graz Graz, Austria.

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http://dx.doi.org/10.3389/fmicb.2016.00180DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4757690PMC
February 2016

Biotic stress shifted structure and abundance of Enterobacteriaceae in the lettuce microbiome.

PLoS One 2015 25;10(2):e0118068. Epub 2015 Feb 25.

Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, 8010, Graz, Austria.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0118068PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4340628PMC
January 2016

Lichens as natural sources of biotechnologically relevant bacteria.

Appl Microbiol Biotechnol 2016 Jan 9;100(2):583-95. Epub 2015 Nov 9.

UMR CNRS 6226, Institut des Sciences chimiques de Rennes, Equipe PNSCM "Produits Naturels - Synthèses - Chimie Médicinale", UFR Sciences Pharmaceutiques et Biologiques, Univ. Rennes 1, Université Européenne de Bretagne, 2 Avenue du Pr. Léon Bernard, F-35043, Rennes, France.

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http://dx.doi.org/10.1007/s00253-015-7114-zDOI Listing
January 2016

Littoral lichens as a novel source of potentially bioactive Actinobacteria.

Sci Rep 2015 Oct 30;5:15839. Epub 2015 Oct 30.

Sorbonne Universités; UPMC Univ. Paris VI, UMS 2348, USR 3579 LBBM, Observatoire Océanologique, Banyuls-sur-Mer 66650, France.

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http://dx.doi.org/10.1038/srep15839DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4626775PMC
October 2015

Qualitative and spatial metabolite profiling of lichens by a LC-MS approach combined with optimised extraction.

Phytochem Anal 2015 Jan-Feb;26(1):23-33. Epub 2014 Aug 6.

UMR CNRS 6226, Institut des Sciences Chimiques de Rennes, Equipe PNSCM 'Produits naturels - Synthèses - Chimie Médicinale', UFR Sciences Pharmaceutiques et Biologiques, Université de Rennes 1, Université Européenne de Bretagne, 2 Avenue du Pr. Léon Bernard, F-35043, Rennes, France.

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http://doi.wiley.com/10.1002/pca.2532
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http://dx.doi.org/10.1002/pca.2532DOI Listing
August 2015

Community Analyses Uncover High Diversity of Lichenicolous Fungi in Alpine Habitats.

Microb Ecol 2015 Aug 21;70(2):348-60. Epub 2015 Mar 21.

Institute of Plant Sciences, Karl-Franzens-University Graz, Holteigasse 6, 8010, Graz, Austria.

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http://dx.doi.org/10.1007/s00248-015-0579-6DOI Listing
August 2015

Extremotolerant fungi from alpine rock lichens and their phylogenetic relationships.

Fungal Divers 2016;76:119-142. Epub 2015 Aug 22.

Institute of Plant Sciences, University of Graz, Holteigasse 6, 8010 Graz, Austria.

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http://dx.doi.org/10.1007/s13225-015-0343-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4739527PMC
August 2015

Analyzing the antagonistic potential of the lichen microbiome against pathogens by bridging metagenomic with culture studies.

Front Microbiol 2015 22;6:620. Epub 2015 Jun 22.

Institute of Environmental Biotechnology, Graz University of Technology Graz, Austria.

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http://dx.doi.org/10.3389/fmicb.2015.00620DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4476105PMC
July 2015

A novel assay for the detection of bioactive volatiles evaluated by screening of lichen-associated bacteria.

Front Microbiol 2015 1;6:398. Epub 2015 May 1.

Institute of Environmental Biotechnology, Graz University of Technology Graz, Austria.

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http://dx.doi.org/10.3389/fmicb.2015.00398DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4416446PMC
May 2015

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Authors:
Conrad L Schoch Barbara Robbertse Vincent Robert Duong Vu Gianluigi Cardinali Laszlo Irinyi Wieland Meyer R Henrik Nilsson Karen Hughes Andrew N Miller Paul M Kirk Kessy Abarenkov M Catherine Aime Hiran A Ariyawansa Martin Bidartondo Teun Boekhout Bart Buyck Qing Cai Jie Chen Ana Crespo Pedro W Crous Ulrike Damm Z Wilhelm De Beer Bryn T M Dentinger Pradeep K Divakar Margarita Dueñas Nicolas Feau Katerina Fliegerova Miguel A García Zai-Wei Ge Gareth W Griffith Johannes Z Groenewald Marizeth Groenewald Martin Grube Marieka Gryzenhout Cécile Gueidan Liangdong Guo Sarah Hambleton Richard Hamelin Karen Hansen Valérie Hofstetter Seung-Beom Hong Jos Houbraken Kevin D Hyde Patrik Inderbitzin Peter R Johnston Samantha C Karunarathna Urmas Kõljalg Gábor M Kovács Ekaphan Kraichak Krisztina Krizsan Cletus P Kurtzman Karl-Henrik Larsson Steven Leavitt Peter M Letcher Kare Liimatainen Jian-Kui Liu D Jean Lodge Janet Jennifer Luangsa-ard H Thorsten Lumbsch Sajeewa S N Maharachchikumbura Dimuthu Manamgoda María P Martín Andrew M Minnis Jean-Marc Moncalvo Giuseppina Mulè Karen K Nakasone Tuula Niskanen Ibai Olariaga Tamás Papp Tamás Petkovits Raquel Pino-Bodas Martha J Powell Huzefa A Raja Dirk Redecker J M Sarmiento-Ramirez Keith A Seifert Bhushan Shrestha Soili Stenroos Benjamin Stielow Sung-Oui Suh Kazuaki Tanaka Leho Tedersoo M Teresa Telleria Dhanushka Udayanga Wendy A Untereiner Javier Diéguez Uribeondo Krishna V Subbarao Csaba Vágvölgyi Cobus Visagie Kerstin Voigt Donald M Walker Bevan S Weir Michael Weiß Nalin N Wijayawardene Michael J Wingfield J P Xu Zhu L Yang Ning Zhang Wen-Ying Zhuang Scott Federhen

Database (Oxford) 2014 30;2014. Epub 2014 Jun 30.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA, CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands, Department of Pharmaceutical Sciences - Microbiology, Università degli Studi di Perugia, Perugia, Italy, Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Westmead, Australia, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Göteborg, Sweden, Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37920, USA, Illinois Natural History Survey, University of Illinois, 1816 South Oak Street, Champaign, IL 61820, USA, Mycology Section, Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK, Natural History Museum, University of Tartu, 46 Vanemuise, 51014 Tartu, Estonia, Purdue University, Department of Botany and Plant Pathology, 915 W. State Street, West Lafayette, IN 47907, USA, Institute of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand, Imperial College London, Royal Botanic Gardens, Kew TW9 3DS, England, UK, Muséum National d'Histoire Naturelle, Dépt. Systématique et Evolution CP39, UMR7205, 12 Rue Buffon, F-75005 Paris, France, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, P. R. China, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain, Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany, Department of Microbiology and Plant Pathology, Forestry Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0001, South Africa, Real Jardín Botánico, RJB-CSIC,

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February 2015

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Front Microbiol 2015 10;6:53. Epub 2015 Feb 10.

Institute of Environmental Biotechnology, Graz University of Technology Graz, Austria.

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February 2015

Bacterial networks and co-occurrence relationships in the lettuce root microbiota.

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Institute of Plant Sciences, University of Graz, Graz, Austria; Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

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January 2015

Microbial cargo: do bacteria on symbiotic propagules reinforce the microbiome of lichens?

Environ Microbiol 2014 Dec;16(12):3743-52

Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, 8010, Graz, Austria; Institute of Plant Sciences, University of Graz, Holteigasse 6, 8010, Graz, Austria.

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http://dx.doi.org/10.1111/1462-2920.12658DOI Listing
December 2014

The plant microbiome and its importance for plant and human health.

Front Microbiol 2014 17;5:491. Epub 2014 Sep 17.

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http://dx.doi.org/10.3389/fmicb.2014.00491DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4166366PMC
October 2014

Photobiont selectivity leads to ecological tolerance and evolutionary divergence in a polymorphic complex of lichenized fungi.

Ann Bot 2014 Sep 5;114(3):463-75. Epub 2014 Aug 5.

Institute of Plant Sciences, Karl-Franzens-University Graz, Holteigasse 6, 8010 Graz, Austria.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4204673PMC
September 2014

Unraveling the plant microbiome: looking back and future perspectives.

Front Microbiol 2014 4;5:148. Epub 2014 Jun 4.

Julius Kühn-Institute (JKI), Institute for Epidemiology and Pathogen Diagnostics, Federal Research Centre for Cultivated Plants Braunschweig, Germany.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4045152PMC
June 2014

New insights into diversity and selectivity of trentepohlialean lichen photobionts from the extratropics.

Symbiosis 2014 21;63:31-40. Epub 2014 Jun 21.

Department of Plant Science, Karl-Franzens-University of Graz, Holteigasse 6, 8010 Graz, Austria.

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June 2014

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FEMS Microbiol Ecol 2013 Aug 18;85(2):313-23. Epub 2013 Apr 18.

Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria.

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August 2013

The lichen connections of black fungi.

Mycopathologia 2013 Jun 17;175(5-6):523-35. Epub 2012 Nov 17.

Institute of Plant Sciences, Karl-Franzens-University Graz, Holteigasse 6, 8010, Graz, Austria.

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June 2013

Antarctic epilithic lichens as niches for black meristematic fungi.

Biology (Basel) 2013 May 17;2(2):784-97. Epub 2013 May 17.

Department of Ecological and BiologicalSciences (DEB), University of Tuscia, Largo dell'Università snc, Viterbo 01100, Italy.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3960883PMC
May 2013

Alphaproteobacterial communities in geographically distant populations of the lichen Cetraria aculeata.

FEMS Microbiol Ecol 2012 Nov 2;82(2):316-25. Epub 2012 Apr 2.

Senckenberg Forschungsinstitut und Naturmuseum, Abt. Botanik und Molekulare Evolutionsforschung, Frankfurt am Main, Germany.

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November 2012

Host-parasite interaction and microbiome response: effects of fungal infections on the bacterial community of the Alpine lichen Solorina crocea.

FEMS Microbiol Ecol 2012 Nov 3;82(2):472-81. Epub 2012 Jul 3.

Institute of Plant Sciences, Karl-Franzens-University, Graz, Austria.

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November 2012

Polyextremotolerant black fungi: oligotrophism, adaptive potential, and a link to lichen symbioses.

Front Microbiol 2012 8;3:390. Epub 2012 Nov 8.

Department of Biology, Biotechnical Faculty, University of Ljubljana Ljubljana, Slovenia ; Centre of Excellence for Integrated Approaches in Chemistry and Biology of Proteins Ljubljana, Slovenia.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3492852PMC
November 2012

A new isidiate species of Arthonia (Ascomycota: Arthoniaceae) from Costa Rica.

Mycologia 2004 Sep-Oct;96(5):1159-62

Institute of Botany, Karl-Franzens-University Graz, 8010 Graz, Austria.

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October 2012

Exploring symbiont management in lichens.

Mol Ecol 2012 Jul;21(13):3098-9

Institute of Plant Sciences, Karl-Franzens-University Graz, 8010 Graz, Austria.

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July 2012

Bacterial taxa associated with the lung lichen Lobaria pulmonaria are differentially shaped by geography and habitat.

FEMS Microbiol Lett 2012 Apr 13;329(2):111-5. Epub 2012 Feb 13.

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

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April 2012

Microbial diversity inside pumpkins: microhabitat-specific communities display a high antagonistic potential against phytopathogens.

Microb Ecol 2012 Feb 23;63(2):418-28. Epub 2011 Sep 23.

Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, Graz, Austria.

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http://dx.doi.org/10.1007/s00248-011-9942-4DOI Listing
February 2012

Age, sun and substrate: triggers of bacterial communities in lichens.

Environ Microbiol Rep 2012 Feb 22;4(1):23-8. Epub 2011 Aug 22.

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria. Institute of Botany, Faculty of Science, Charles University in Prague, Prague, Czech. Institute of Plant Sciences, Karl-Franzens University, Graz, Austria.

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February 2012

Frondihabitans cladoniiphilus sp. nov., an actinobacterium of the family Microbacteriaceae isolated from lichen, and emended description of the genus Frondihabitans.

Int J Syst Evol Microbiol 2011 Dec 4;61(Pt 12):3033-8. Epub 2011 Feb 4.

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

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http://dx.doi.org/10.1099/ijs.0.028324-0DOI Listing
December 2011

The emerging potential of melanized fungi: black yeast between beauty and the beast.

Fungal Biol 2011 Oct 18;115(10):935-6. Epub 2011 May 18.

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October 2011

Black fungi and associated bacterial communities in the phyllosphere of grapevine.

Fungal Biol 2011 Oct 19;115(10):978-86. Epub 2011 May 19.

Institute of Plant Sciences, Karl-Franzens-University, Holteigasse 6, 8010 Graz, Austria.

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October 2011

Evolution of fungal pathogens in domestic environments?

Fungal Biol 2011 Oct 15;115(10):1008-18. Epub 2011 Mar 15.

Centre of Excellence for Integrated Approaches in Chemistry and Biology of Proteins, Jamova 39, SI-1000 Ljubljana, Slovenia.

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October 2011

Microbial metacommunities in the lichen-rock habitat.

Environ Microbiol Rep 2011 Aug 19;3(4):434-42. Epub 2010 Aug 19.

Department of Biology Centre for Geobiology Department of Earth Science, University of Bergen, Postboks 7803, N-5020 Bergen, Norway. Institute of Plant Sciences, Karl-Franzens-Universität Graz, Holteigasse 6, A-8010 Graz, Austria.

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August 2011

Structure and function of the symbiosis partners of the lung lichen (Lobaria pulmonaria L. Hoffm.) analyzed by metaproteomics.

Proteomics 2011 Jul 23;11(13):2752-6. Epub 2011 May 23.

University of Zurich, Institute of Plant Biology, Zürich, Switzerland.

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July 2011

Photobiont association and genetic diversity of the optionally lichenized fungus Schizoxylon albescens.

FEMS Microbiol Ecol 2011 Feb 6;75(2):255-72. Epub 2010 Dec 6.

Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria.

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February 2011

A contribution to the taxonomy of the genus Rinodina (Physciaceae, lichenized Ascomycotina) using combined ITS and mtSSU rDNA data.

Lichenologist 2010 Sep;42(5):521-531

M. G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, Tereschenkivs'ka 2, 01601 Kyiv, Ukraine.

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http://dx.doi.org/10.1017/S0024282910000186DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3223597PMC
September 2010

Phylogenetic placement of some morphologically unusual members of Verrucariales.

Mycologia 2010 Jul-Aug;102(4):835-46

Institute of Plant Sciences, Karl-Franzens-University Graz, Holteigasse 6, 8010 Graz, Austria.

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August 2010

Type III polyketide synthases in lichen mycobionts.

Fungal Biol 2010 Apr 9;114(4):379-85. Epub 2010 Mar 9.

Institute of Plant Sciences, Karl-Franzens-Universität Graz, Holteigasse 6, Graz, Austria.

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April 2010

Joint dispersal does not imply maintenance of partnerships in lichen symbioses.

Microb Ecol 2010 Jan;59(1):150-7

Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria.

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January 2010

Extremotolerance in fungi: evolution on the edge.

FEMS Microbiol Ecol 2010 Jan;71(1):2-11

Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.

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January 2010

Species-specific structural and functional diversity of bacterial communities in lichen symbioses.

ISME J 2009 Sep 25;3(9):1105-15. Epub 2009 Jun 25.

Institute of Plant Sciences, Karl-Franzens-University of Graz, Graz, Austria.

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September 2009

Repeated evolution of closed fruiting bodies is linked to ascoma development in the largest group of lichenized fungi (Lecanoromycetes, Ascomycota).

Mol Phylogenet Evol 2009 Jul 27;52(1):34-44. Epub 2009 Mar 27.

Department of Plant Biology and Bell Museum of Natural History, University of Minnesota, 1445 Gortner Ave, St. Paul, MN 55108, USA.

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July 2009

Pronounced genetic diversity in tropical epiphyllous lichen fungi.

Mol Ecol 2009 May 15;18(10):2185-97. Epub 2009 Apr 15.

Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria.

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May 2009

A transcribed polyketide synthase gene from Xanthoria elegans.

Mycol Res 2009 Jan 6;113(Pt 1):82-92. Epub 2008 Sep 6.

Department of Organismic Biology, University of Salzburg, Hellbrunnerstr. 34, 5020 Salzburg, Austria.

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January 2009

Bartheletia paradoxa is a living fossil on Ginkgo leaf litter with a unique septal structure in the Basidiomycota.

Mycol Res 2008 Nov 8;112(Pt 11):1265-79. Epub 2008 Jul 8.

Universität Graz, Institut für Pflanzenwissenschaften, Bereich Systematische Botanik und Geobotanik, Graz, Austria.

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November 2008

In situ analysis of the bacterial community associated with the reindeer lichen Cladonia arbuscula reveals predominance of Alphaproteobacteria.

FEMS Microbiol Ecol 2008 Oct 8;66(1):63-71. Epub 2008 Jul 8.

Institute of Plant Sciences, Karl-Franzens-Universität Graz, Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

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October 2008

Purifying selection is a prevailing motif in the evolution of ketoacyl synthase domains of polyketide synthases from lichenized fungi.

Mycol Res 2008 Feb 15;112(Pt 2):277-88. Epub 2007 Sep 15.

Institute of Plant Sciences, Karl-Franzens-Universität Graz, Holteigasse 6, A-8010 Graz, Styria, Austria.

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February 2008

The sterile microfilamentous lichenized fungi Cystocoleus ebeneus and Racodium rupestre are relatives of plant pathogens and clinically important dothidealean fungi.

Mycol Res 2008 Jan 21;112(Pt 1):50-6. Epub 2007 Nov 21.

Institut für Pflanzenwissenschaften, Karl-Franzens-Universität Graz, Holteigasse 6, Graz, Austria.

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January 2008

A combined molecular and morphological approach to species delimitation in black-fruited, endolithic Caloplaca: high genetic and low morphological diversity.

Mycol Res 2008 Jan 11;112(Pt 1):36-49. Epub 2007 Feb 11.

Institut für Pflanzenwissenschaften, Karl-Franzens-Universität Graz, Holteigasse 6, Graz, Austria.

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January 2008

The sister group relation of parmeliaceae (Lecanorales, Ascomycota).

Mycologia 2007 Jan-Feb;99(1):42-9

Botanical Museum, Lund University, Ostra Vallgatan, SE-223 61 Lund, Sweden.

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September 2007

The new species Lecanora bicinctoidea, its position and considerations about phenotypic evolution in the Lecanora rupicola group.

Mycologia 2007 Jan-Feb;99(1):50-8

Institute of Plant Sciences, Holteigasse 6, Karl-Franzens-University Graz, A-8010 Graz, Austria.

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September 2007

Trouble with lichen: the re-evaluation and re-interpretation of thallus form and fruit body types in the molecular era.

Mycol Res 2007 Sep 13;111(Pt 9):1116-32. Epub 2007 May 13.

Institut für Pflanzenwissenschaften, Karl-Franzens Universität Graz, Holteigasse 6, A-8010 Graz, Austria.

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September 2007

Ultrastructural and genetic characteristics of endolithic cyanobacterial biofilms colonizing Antarctic granite rocks.

FEMS Microbiol Ecol 2007 Feb;59(2):386-95

Centro de Ciencias Medioambientales (CSIC), Serrano, Madrid, Spain.

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February 2007

Alterations in secondary metabolism of aposymbiotically grown mycobionts of Xanthoria elegans and cultured resynthesis stages.

Plant Physiol Biochem 2007 Feb 20;45(2):146-51. Epub 2007 Jan 20.

Department of Organismic Biology, University of Salzburg, Hellbrunnerstrasse 34, Salzburg 5020, Austria.

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http://dx.doi.org/10.1016/j.plaphy.2007.01.004DOI Listing
February 2007

Molecular analysis of lichen-associated bacterial communities.

FEMS Microbiol Ecol 2006 Sep;57(3):484-95

Dipartimento di Biologia Cellulare e dello Sviluppo, Università degli Studi di Palermo, Palermo, Italy.

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September 2006

Phylogeny and phenotypic variation in the lichen family Graphidaceae (Ostropomycetidae, Ascomycota).

Mycol Res 2006 Jul;110(Pt 7):765-72

Institute of Botany, University of Regensburg, Universitätsstrasse 31, D-93053 Regensburg, Germany.

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July 2006

Evolution and phylogenetic relationships within Porinaceae (Ostropomycetidae), focusing on foliicolous species.

Mycol Res 2006 Feb 22;110(Pt 2):125-36. Epub 2005 Dec 22.

Institute of Plant Sciences, Karl-Franzens-University Graz, Holteigasse 6, A-8010 Graz, Austria.

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http://dx.doi.org/10.1016/j.mycres.2005.09.009DOI Listing
February 2006

Nucleic acid isolation from ecological samples--fungal associations, lichens.

Authors:
Martin Grube

Methods Enzymol 2005 ;395:48-57

Institute of Plant Sciences, Karl-Franzens-University Graz, 8010 Graz, Austria.

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August 2005

The phylogeny of Porinaceae (Ostropomycetidae) suggests a neotenic origin of perithecia in Lecanoromycetes.

Mycol Res 2004 Oct;108(Pt 10):1111-8

Institute for Plant Sciences, University Graz, Holteigasse 6, A-8010 Graz, Austria.

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http://dx.doi.org/10.1017/s0953756204000826DOI Listing
October 2004

A phylogenetic study of the Lecanora rupicola group (Lecanoraceae, Ascomycota).

Mycol Res 2004 May;108(Pt 5):506-14

Institut für Botanik, Karl-Franzens-University Graz, Holteigasse 6, A-8010 Graz, Austria.

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http://dx.doi.org/10.1017/s0953756204009888DOI Listing
May 2004

On the phylogeny of some polyketide synthase genes in the lichenized genus Lecanora.

Mycol Res 2003 Dec;107(Pt 12):1419-26

Institut für Botanik, Karl-Franzens-Universität Graz, Austria.

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http://dx.doi.org/10.1017/s0953756203008724DOI Listing
December 2003