Martin Dugas

Martin Dugas

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Martin Dugas

Martin Dugas

Publications by authors named "Martin Dugas"

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Benchmarking of 4C-seq pipelines based on real and simulated data.

Bioinformatics 2019 Dec;35(23):4938-4945

Institute of Medical Informatics, University of Münster, Münster, Germany.

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https://academic.oup.com/bioinformatics/advance-article/doi/
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http://dx.doi.org/10.1093/bioinformatics/btz426DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6901067PMC
December 2019

StudyPortal - Geovisualization of Study Research Networks.

J Med Syst 2019 Dec 10;44(1):22. Epub 2019 Dec 10.

Institute of Medical Informatics, University of Münster, Albert-Schweitzer-Campus 1, Gebäude A11, 48149, Münster, Germany.

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http://dx.doi.org/10.1007/s10916-019-1493-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6904404PMC
December 2019

Macrophage-tumor cell interaction promotes ATRT progression and chemoresistance.

Acta Neuropathol 2019 Dec 17. Epub 2019 Dec 17.

Department of Pediatric Hematology and Oncology, University Children's Hospital Münster, Albert-Schweitzer-Campus 1, 48149, Münster, Germany.

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http://dx.doi.org/10.1007/s00401-019-02116-7DOI Listing
December 2019

Reviving 30 Year Old Technology: Lessons Learned from Transferring Patient Data Using Data Matrix Codes.

Stud Health Technol Inform 2019 ;258:90-94

Institute of Medical Informatics, University of Münster, Germany.

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August 2019

Interoperability Improvement of Mobile Patient Survey (MoPat) Implementing Fast Health Interoperability Resources (FHIR).

Stud Health Technol Inform 2019 ;258:141-145

Institute of Medical Informatics, University of Muenster, Muenster, Germany.

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August 2019

StudyPortal - A Novel Method to Visualize Study Research Networks.

Stud Health Technol Inform 2019 ;258:163

Institute of Medical Informatics, University of Münster, Germany.

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August 2019

Portal of Medical Data Models: Status 2018.

Stud Health Technol Inform 2019 ;258:239-240

Institute of Medical Informatics, University of Münster, Germany.

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August 2019

Core Data Elements in Acute Myeloid Leukemia: A Unified Medical Language System-Based Semantic Analysis and Experts' Review.

JMIR Med Inform 2019 Aug 12;7(3):e13554. Epub 2019 Aug 12.

Institute of Medical Informatics, University of Münster, Münster, Germany.

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http://dx.doi.org/10.2196/13554DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6709897PMC
August 2019

Electronic Image Documentation of Patient Reported Outcomes Using Mobile Technologies.

Stud Health Technol Inform 2019 Aug;264:1779-1780

Institute of Medical Informatics, University of Münster, Münster, Germany.

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http://dx.doi.org/10.3233/SHTI190644DOI Listing
August 2019

Common Data Elements for Acute Coronary Syndrome: Analysis Based on the Unified Medical Language System.

JMIR Med Inform 2019 Aug 23;7(3):e14107. Epub 2019 Aug 23.

Institute of Medical Informatics, University of Münster, Münster, Germany.

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http://dx.doi.org/10.2196/14107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6729118PMC
August 2019

Establishing risk-adjusted quality indicators in surgery using administrative data-an example from neurosurgery.

Acta Neurochir (Wien) 2019 06 26;161(6):1057-1065. Epub 2019 Apr 26.

Department of Neurosurgery, University Hospital Münster, Albert-Schweitzer-Campus 1, 48149, Münster, Germany.

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http://dx.doi.org/10.1007/s00701-018-03792-2DOI Listing
June 2019

Genetic alterations in human papillomavirus-associated oropharyngeal squamous cell carcinoma of patients with treatment failure.

Oral Oncol 2019 Jun 28;93:59-65. Epub 2019 Apr 28.

Department of Otorhinolaryngology, Head and Neck Surgery, Justus-Liebig University Giessen, 35392 Giessen, Germany.

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http://dx.doi.org/10.1016/j.oraloncology.2019.04.013DOI Listing
June 2019

Adverse events in brain tumor surgery: incidence, type, and impact on current quality metrics.

Acta Neurochir (Wien) 2019 02 11;161(2):287-306. Epub 2019 Jan 11.

Department of Neurosurgery, University Hospital Münster, Albert-Schweitzer-Campus 1, 48149, Münster, Germany.

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http://link.springer.com/10.1007/s00701-018-03790-4
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http://dx.doi.org/10.1007/s00701-018-03790-4DOI Listing
February 2019

A Web Service to Suggest Semantic Codes Based on the MDM-Portal.

Stud Health Technol Inform 2018 ;253:35-39

Institute of Medical Informatics, University of Münster, Germany.

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November 2018

Conducting a Multilingual Study Researching Traumatised Refugees Utilizing a Patient-Reported Outcome System.

Stud Health Technol Inform 2018 ;253:109-113

Institute of Medical Informatics, University of Muenster, Muenster, Germany.

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November 2018

Connecting healthcare and clinical research: Workflow optimizations through seamless integration of EHR, pseudonymization services and EDC systems.

Int J Med Inform 2018 11 10;119:103-108. Epub 2018 Sep 10.

Institute of Medical Informatics, University of Münster, Münster, Germany. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S13865056183023
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http://dx.doi.org/10.1016/j.ijmedinf.2018.09.007DOI Listing
November 2018

Web-Based Information Infrastructure Increases the Interrater Reliability of Medical Coders: Quasi-Experimental Study.

J Med Internet Res 2018 10 15;20(10):e274. Epub 2018 Oct 15.

Institute of Medical Informatics, European Research Center for Information Systems, Münster, Germany.

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http://preprints.jmir.org/preprint/9644/accepted
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http://dx.doi.org/10.2196/jmir.9644DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6231825PMC
October 2018

CDEGenerator: an online platform to learn from existing data models to build model registries.

Clin Epidemiol 2018 10;10:961-970. Epub 2018 Aug 10.

Institute of Medical Informatics, University of Münster,

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http://dx.doi.org/10.2147/CLEP.S170075DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6089100PMC
August 2018

Operational Data Model Conversion to ResearchKit.

Stud Health Technol Inform 2017 ;245:225-229

Institute of Medical Informatics, University of Münster, Germany.

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June 2018

A Secure Architecture to Provide a Medical Emergency Dataset for Patients in Germany and Abroad.

Stud Health Technol Inform 2017 ;245:230-234

Office for eHealth, University Hospital Muenster, Muenster, Germany.

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June 2018

What Information Does Your EHR Contain? Automatic Generation of a Clinical Metadata Warehouse (CMDW) to Support Identification and Data Access Within Distributed Clinical Research Networks.

Stud Health Technol Inform 2017 ;245:313-317

Institute of Medical Informatics, University of Münster, Münster, Germany.

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June 2018

The Portal of Medical Data Models: Where Have We Been and Where Are We Going?

Stud Health Technol Inform 2017 ;245:858-862

Institute of Medical Informatics, University of Münster, Münster, Germany.

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June 2018

Medical Effect of Venous Thromboembolism Prophylaxis Systems and Common Input Categories: Preliminary Findings from a Systematic Review.

Stud Health Technol Inform 2017 ;245:1175-1179

Institute of Medical Informatics, University of Münster, Münster, Germany.

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June 2018

Integrating x4T-EDC into an Image-Portal to Establish an Ophthalmic Reading Center.

Stud Health Technol Inform 2017 ;245:1254

Institute of Medical Informatics, University Hospital Münster, Münster, Germany.

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June 2018

VIPER: a web application for rapid expert review of variant calls.

Bioinformatics 2018 06;34(11):1928-1929

Institute of Medical Informatics, University of Münster, Münster 48149, Germany.

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http://dx.doi.org/10.1093/bioinformatics/bty022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5972565PMC
June 2018

Compatibility Between Metadata Standards: Import Pipeline of CDISC ODM to the Samply.MDR.

Stud Health Technol Inform 2018 ;247:221-225

Institute of Medical Informatics, University of Münster, Germany.

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June 2018

Standardising the Development of ODM Converters: The ODMToolBox.

Stud Health Technol Inform 2018 ;247:231-235

Institute of Medical Informatics, University of Münster, Germany.

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June 2018

Effects of computerized decision support system implementations on patient outcomes in inpatient care: a systematic review.

J Am Med Inform Assoc 2018 05;25(5):593-602

Institute of Medical Informatics, University of Münster, Münster, Germany.

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http://dx.doi.org/10.1093/jamia/ocx100DOI Listing
May 2018

Automatic Conversion of Metadata from the Study of Health in Pomerania to ODM.

Stud Health Technol Inform 2017 ;236:88-96

Institute of Medical Informatics, University of Münster, Germany.

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April 2018

Automated Transformation of CDISC ODM to OpenClinica.

Stud Health Technol Inform 2017 ;243:95-99

Institute of Medical Informatics, University of Münster, Germany.

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April 2018

Validation of Pruritus Measures Gathered with the Electronic Patient-reported Outcome System MoPat.

Acta Derm Venereol 2018 Jan;98(1):38-43

Institute of Medical Informatics, University of Münster, Domagkstrasse 9, DE-48149 Münster, Germany.

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http://dx.doi.org/10.2340/00015555-2799DOI Listing
January 2018

Genetic predisposition in children with cancer - affected families' acceptance of Trio-WES.

Eur J Pediatr 2018 Jan 19;177(1):53-60. Epub 2017 Sep 19.

Department of Pediatric Oncology, Hematology and Clinical Immunology, University Children's Hospital, Medical Faculty, Heinrich Heine University, Moorenstr. 5, 40225, Duesseldorf, Germany.

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http://dx.doi.org/10.1007/s00431-017-2997-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748429PMC
January 2018

Correction to: Genetic predisposition in children with cancer - affected families' acceptance of Trio-WES.

Eur J Pediatr 2018 01;177(1):61

Department of Pediatric Oncology, Hematology and Clinical Immunology, University Children's Hospital, Medical Faculty, Heinrich Heine University, Moorenstr. 5, 40225, Duesseldorf, Germany.

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http://dx.doi.org/10.1007/s00431-017-3033-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6828017PMC
January 2018

Infection as a cause of childhood leukemia: virus detection employing whole genome sequencing.

Haematologica 2017 05 2;102(5):e179-e183. Epub 2017 Feb 2.

Department of Pediatric Oncology, Hematology and Clinical Immunology, University Children's Hospital, Medical Faculty, Heinrich-Heine-University, Düsseldorf, Germany.

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http://dx.doi.org/10.3324/haematol.2016.155382DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5685284PMC
May 2017

Implementation of an ODM and HL7 Compliant Electronic Patient-Reported Outcome System.

Stud Health Technol Inform 2016 ;228:421-5

Institute of Medical Informatics, Universtity of Münster.

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April 2017

Converting ODM Metadata to FHIR Questionnaire Resources.

Stud Health Technol Inform 2016 ;228:456-60

Institute of Medical Informatics, University of Münster.

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April 2017

Evaluating Variant Calling Tools for Non-Matched Next-Generation Sequencing Data.

Sci Rep 2017 02 24;7:43169. Epub 2017 Feb 24.

Institute of Medical Informatics, University of Münster, Münster, 48149, Germany.

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http://dx.doi.org/10.1038/srep43169DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5324109PMC
February 2017

BBCAnalyzer: a visual approach to facilitate variant calling.

BMC Bioinformatics 2017 Feb 28;18(1):133. Epub 2017 Feb 28.

Institute of Medical Informatics, University of Münster, Albert-Schweitzer-Campus 1, Münster, 48149, Germany.

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http://dx.doi.org/10.1186/s12859-017-1549-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5330023PMC
February 2017

Leveraging the EHR4CR platform to support patient inclusion in academic studies: challenges and lessons learned.

BMC Med Res Methodol 2017 02 28;17(1):36. Epub 2017 Feb 28.

Biomedical Informatics and Public Health department, Hôpital Européen Georges Pompidou, AP-HP, 10 Rue Leblanc, 75015, Paris, France.

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http://dx.doi.org/10.1186/s12874-017-0299-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5329914PMC
February 2017

S2O - A software tool for integrating research data from general purpose statistic software into electronic data capture systems.

BMC Med Inform Decis Mak 2017 01 7;17(1). Epub 2017 Jan 7.

Institute of Medical Informatics, University of Münster, 48149, Münster, Germany.

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http://dx.doi.org/10.1186/s12911-016-0402-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5219713PMC
January 2017

Clinical Trial Feasibility Study Questionnaire Analysis.

Stud Health Technol Inform 2015 ;216:1029

Institute of Medical Informatics, University of Münster, Germany.

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December 2016

A European inventory of data elements for patient recruitment.

Stud Health Technol Inform 2015 ;210:506-10

Institute of Medical Informatics, University Münster, Albert-Schweitzer-Campus 1/A11, D-48149 Münster, Germany.

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November 2016

Standardized quality assurance forms for organ transplantations with multilingual support, open access and UMLS coding.

Stud Health Technol Inform 2015 ;212:15-22

Institute of Medical Informatics, University of Muenster, Germany.

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November 2016

Standardized mappings--a framework to combine different semantic mappers into a standardized web-API.

Stud Health Technol Inform 2015 ;212:23-6

Institute of Medical Informatics, Westfälische Wilhelms-Universität, Münster, Germany.

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November 2016

Web-based multi-site feasibility questionnaire tool.

Stud Health Technol Inform 2015 ;212:88-93

Institute of Medical Informatics, University of Münster, Germany.

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November 2016

Design of case report forms based on a public metadata registry: re-use of data elements to improve compatibility of data.

Authors:
Martin Dugas

Trials 2016 11 29;17(1):566. Epub 2016 Nov 29.

Institute of Medical Informatics, University of Münster, Albert-Schweitzer-Campus 1, A11, D-48149, Münster, Germany.

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http://dx.doi.org/10.1186/s13063-016-1691-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5129226PMC
November 2016

Health-Related Quality of Life in Chronic Pruritus: An Analysis Related to Disease Etiology, Clinical Skin Conditions and Itch Intensity.

Dermatology 2015 13;231(3):253-9. Epub 2015 Aug 13.

Department of Dermatology, Center for Chronic Pruritus, University Hospital Mx00FC;nster, Mx00FC;nster, Germany.

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http://dx.doi.org/10.1159/000437206DOI Listing
June 2016

ODMedit: uniform semantic annotation for data integration in medicine based on a public metadata repository.

BMC Med Res Methodol 2016 06 1;16:65. Epub 2016 Jun 1.

Institute of Medical Informatics, University of Münster, Albert-Schweitzer-Campus 1 | A11, D-48149, Münster, Germany.

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http://dx.doi.org/10.1186/s12874-016-0164-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4888420PMC
June 2016

Sharing clinical trial data.

Authors:
Martin Dugas

Lancet 2016 Jun;387(10035):2287

Medical Informatics, University of Münster, Münster D-48149, Germany. Electronic address:

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http://dx.doi.org/10.1016/S0140-6736(16)30683-3DOI Listing
June 2016

Standardized Cardiovascular Quality Assurance Forms with Multilingual Support, UMLS Coding and Medical Concept Analyses.

Stud Health Technol Inform 2015 ;216:837-41

Institute of Medical Informatics, University of Muenster, Germany.

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April 2016

Leukemogenic MLL-ENL Fusions Induce Alternative Chromatin States to Drive a Functionally Dichotomous Group of Target Genes.

Cell Rep 2016 Apr 31;15(2):310-22. Epub 2016 Mar 31.

Department of Genetics, Friedrich-Alexander-University Erlangen-Nürnberg, 91058 Erlangen, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2016.03.018DOI Listing
April 2016

Deep Sequencing in Conjunction with Expression and Functional Analyses Reveals Activation of FGFR1 in Ewing Sarcoma.

Clin Cancer Res 2015 Nov 15;21(21):4935-46. Epub 2015 Jul 15.

Department of Medicine A, Hematology, and Oncology, University Hospital of Muenster, Muenster, Germany. Department of Medicine IV, Hematology and Oncology, State Center for Cell and Gene Therapy, University Hospital Halle, Halle (Saale), Germany.

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http://dx.doi.org/10.1158/1078-0432.CCR-14-2744DOI Listing
November 2015

MYST2 acetyltransferase expression and Histone H4 Lysine acetylation are suppressed in AML.

Exp Hematol 2015 Sep 11;43(9):794-802.e4. Epub 2015 Jun 11.

Department of Medicine A, Hematology, Hemostaseology, Oncology and Pneumology, University of Muenster, Muenster, Germany; Department of Medicine, Hematology and Oncology, University of Halle, Halle, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.exphem.2015.05.010DOI Listing
September 2015

Next-generation-sequencing of recurrent childhood high hyperdiploid acute lymphoblastic leukemia reveals mutations typically associated with high risk patients.

Leuk Res 2015 Sep 14;39(9):990-1001. Epub 2015 Jun 14.

Department of Pediatric Oncology, Hematology and Clinical Immunology, University Children's Hospital, Medical Faculty, Heinrich Heine University, Düsseldorf, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.leukres.2015.06.005DOI Listing
September 2015

Towards a trial-ready mobile patient questionnaire system.

Stud Health Technol Inform 2014 ;205:768-72

Institute of Medical Informatics, University of Münster, Münster, Germany.

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May 2015

Analysis of eligibility criteria from ClinicalTrials.gov.

Stud Health Technol Inform 2014 ;205:853-7

Insitute of Medical Informatics, University of Münster, Germany.

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May 2015

Protocol feasibility workflow using an automated multi-country patient cohort system.

Stud Health Technol Inform 2014 ;205:985-9

Institute of Medical Informatics, University of Münster, Germany.

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May 2015

Efficiency and effectiveness evaluation of an automated multi-country patient count cohort system.

BMC Med Res Methodol 2015 May 1;15:44. Epub 2015 May 1.

Institute of Medical Informatics, University of Münster, Albert-Schweitzer-Campus 1/A11, D-48149, Münster, Germany.

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http://dx.doi.org/10.1186/s12874-015-0035-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4423123PMC
May 2015

ODM2CDA and CDA2ODM: tools to convert documentation forms between EDC and EHR systems.

Authors:
Martin Dugas

BMC Med Inform Decis Mak 2015 May 26;15:40. Epub 2015 May 26.

Institute of Medical Informatics, University of Münster, Albert-Schweitzer-Campus 1, A11, D-48149, Münster, Germany.

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http://dx.doi.org/10.1186/s12911-015-0163-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4494189PMC
May 2015

Success criteria for electronic medical record implementations in low-resource settings: a systematic review.

J Am Med Inform Assoc 2015 Mar 13;22(2):479-88. Epub 2015 Mar 13.

Institute of Medical Informatics, University of Münster, Münster, Germany.

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http://dx.doi.org/10.1093/jamia/ocu038DOI Listing
March 2015

Using electronic health records for clinical research: the case of the EHR4CR project.

J Biomed Inform 2015 Feb 18;53:162-73. Epub 2014 Oct 18.

Department of Public Health, Unit of Medical Informatics and Statistics, Ghent University, Ghent, Belgium; The European Institute for Health Records (EuroRec), Sint-Martens-Latem, Belgium. Electronic address:

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http://www.ehr4cr.eu/files/publications/Corevits_et_al_Journ
Web Search
http://linkinghub.elsevier.com/retrieve/pii/S153204641400226
Publisher Site
http://dx.doi.org/10.1016/j.jbi.2014.10.006DOI Listing
February 2015

Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data.

Bioinformatics 2014 Nov 30;30(22):3268-9. Epub 2014 Jul 30.

Institute of Medical Informatics, University of Münster, 48149 Münster, Germany, and Institute of Molecular Tumorbiology, University of Münster, 48149 Münster, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btu497DOI Listing
November 2014

Comparison of electronic health record system functionalities to support the patient recruitment process in clinical trials.

Int J Med Inform 2014 Nov 25;83(11):860-8. Epub 2014 Aug 25.

Chair of Medical Informatics, Friedrich-Alexander-University Erlangen-Nuremberg, Krankenhausstraße 12, 91054 Erlangen, Germany.

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http://dx.doi.org/10.1016/j.ijmedinf.2014.08.005DOI Listing
November 2014

Characterization of image transfer patterns in a regional trauma network.

J Med Syst 2014 Nov 30;38(11):137. Epub 2014 Sep 30.

Institut of Medical Informatics, University of Muenster, Muenster, Germany,

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http://link.springer.com/content/pdf/10.1007/s10916-014-0137
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http://link.springer.com/10.1007/s10916-014-0137-7
Publisher Site
http://dx.doi.org/10.1007/s10916-014-0137-7DOI Listing
November 2014

A new workflow for whole-genome sequencing of single human cells.

Hum Mutat 2014 Oct 18;35(10):1260-70. Epub 2014 Aug 18.

Department of Pediatric Oncology, Hematology and Clinical Immunology, Medical Faculty, University of Duesseldorf, Duesseldorf, Germany.

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http://dx.doi.org/10.1002/humu.22625DOI Listing
October 2014