Martijn J Schuemie

Martijn J Schuemie

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Martijn J Schuemie

Publications by authors named "Martijn J Schuemie"

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Comparison of First-Line Dual Combination Treatments in Hypertension: Real-World Evidence from Multinational Heterogeneous Cohorts.

Korean Circ J 2020 Jan 28;50(1):52-68. Epub 2019 Aug 28.

Division of Cardiology, Severance Cardiovascular Hospital and Cardiovascular Research Institute, Yonsei University College of Medicine, Seoul, Korea.

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http://dx.doi.org/10.4070/kcj.2019.0173DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6923236PMC
January 2020

Learning from electronic health records across multiple sites: A communication-efficient and privacy-preserving distributed algorithm.

J Am Med Inform Assoc 2019 Dec 9. Epub 2019 Dec 9.

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1093/jamia/ocz199DOI Listing
December 2019

Comprehensive comparative effectiveness and safety of first-line antihypertensive drug classes: a systematic, multinational, large-scale analysis.

Lancet 2019 11 24;394(10211):1816-1826. Epub 2019 Oct 24.

Epidemiology Analytics, Janssen Research & Development, Titusville, NJ, USA; Department of Biomedical Informatics, Columbia University Medical Center, New York, NY, USA.

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http://dx.doi.org/10.1016/S0140-6736(19)32317-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6924620PMC
November 2019

A plea to stop using the case-control design in retrospective database studies.

Stat Med 2019 Sep 22;38(22):4199-4208. Epub 2019 Aug 22.

Observational Health Data Sciences and Informatics, New York, New York.

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http://dx.doi.org/10.1002/sim.8215DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6771795PMC
September 2019

Comment on "How pharmacoepidemiology networks can manage distributed analyses to improve replicability and transparency and minimize bias".

Pharmacoepidemiol Drug Saf 2019 07 8;28(7):1032-1033. Epub 2019 May 8.

Observational Health Data Sciences and Informatics, New York, NY.

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http://dx.doi.org/10.1002/pds.4798DOI Listing
July 2019

Evaluating large-scale propensity score performance through real-world and synthetic data experiments.

Int J Epidemiol 2018 12;47(6):2005-2014

Department of Biomathematics, David Geffen School of Medicine at UCLA, University of California, Los Angeles, CA, USA.

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http://dx.doi.org/10.1093/ije/dyy120DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6280944PMC
December 2018

Improving reproducibility by using high-throughput observational studies with empirical calibration.

Philos Trans A Math Phys Eng Sci 2018 Sep;376(2128)

Observational Health Data Sciences and Informatics (OHDSI), New York, NY 10032, USA.

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http://rsta.royalsocietypublishing.org/lookup/doi/10.1098/rs
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http://dx.doi.org/10.1098/rsta.2017.0356DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6107542PMC
September 2018

Prenatal antidepressant exposure and the risk of attention-deficit hyperactivity disorder in children: A systematic review and meta-analysis.

Neurosci Biobehav Rev 2018 03 13;86:1-11. Epub 2017 Dec 13.

Centre for Safe Medication Practice and Research, Department of Pharmacology and Pharmacy, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong; Department of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong; Research Department of Practice and Policy, UCL School of Pharmacy, London, United Kingdom. Electronic address:

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http://dx.doi.org/10.1016/j.neubiorev.2017.12.007DOI Listing
March 2018

Prenatal antidepressant use and risk of attention-deficit/hyperactivity disorder in offspring: population based cohort study.

BMJ 2017 May 31;357:j2350. Epub 2017 May 31.

Centre for Safe Medication Practice and Research, Department of Pharmacology and Pharmacy, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5450015PMC
http://dx.doi.org/10.1136/bmj.j2350DOI Listing
May 2017

Atypical Antipsychotics and the Risk of Falls and Fractures Among Older Adults: An Emulation Analysis and an Evaluation of Additional Confounding Control Strategies.

J Clin Psychopharmacol 2017 Apr;37(2):162-168

From Global Research & Development Epidemiology, Janssen Research & Development, LLC, Titusville, NJ.

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http://dx.doi.org/10.1097/JCP.0000000000000647DOI Listing
April 2017

Atypical Antipsychotics and the Risks of Acute Kidney Injury and Related Outcomes Among Older Adults: A Replication Analysis and an Evaluation of Adapted Confounding Control Strategies.

Drugs Aging 2017 03;34(3):211-219

Janssen Research & Development, LLC, Global Research and Development Epidemiology, 1125 Trenton Harbourton Road, Rm K30205, Titusville, NJ, 08560, USA.

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http://link.springer.com/10.1007/s40266-016-0430-x
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http://dx.doi.org/10.1007/s40266-016-0430-xDOI Listing
March 2017

Detecting adverse drug reactions following long-term exposure in longitudinal observational data: The exposure-adjusted self-controlled case series.

Stat Methods Med Res 2016 12 31;25(6):2577-2592. Epub 2014 Mar 31.

Observational Medical Outcomes Partnership, Foundation for the National Institutes of Health, Bethesda, USA.

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http://dx.doi.org/10.1177/0962280214527531DOI Listing
December 2016

Robust empirical calibration of p-values using observational data.

Stat Med 2016 09;35(22):3883-8

Department of Biomathematics and Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, CA, U.S.A.

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http://dx.doi.org/10.1002/sim.6977DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5108459PMC
September 2016

Hierarchical Models for Multiple, Rare Outcomes Using Massive Observational Healthcare Databases.

Stat Anal Data Min 2016 Aug 17;9(4):260-268. Epub 2016 Jul 17.

Department of Biomathematics, David Geffen School of Medicine at UCLA, Los Angeles, California, U.S.A.

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http://dx.doi.org/10.1002/sam.11324DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5423675PMC
August 2016

Characterizing treatment pathways at scale using the OHDSI network.

Proc Natl Acad Sci U S A 2016 07 6;113(27):7329-36. Epub 2016 Jun 6.

Observational Health Data Sciences and Informatics, New York, NY 10032; Department of Statistics, Columbia University, New York, NY 10027.

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http://dx.doi.org/10.1073/pnas.1510502113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4941483PMC
July 2016

Seasonality in acute liver injury? Findings in two health care claims databases.

Drug Healthc Patient Saf 2016 31;8:39-48. Epub 2016 Mar 31.

Epidemiology, Janssen Research and Development, LLC, Titusville, NJ, USA.

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http://dx.doi.org/10.2147/DHPS.S95399DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824282PMC
April 2016

A normalization method for combination of laboratory test results from different electronic healthcare databases in a distributed research network.

Pharmacoepidemiol Drug Saf 2016 Mar 3;25(3):307-16. Epub 2015 Nov 3.

Department of Biomedical Informatics, Ajou University School of Medicine, Ajou University, Suwon, Korea.

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http://dx.doi.org/10.1002/pds.3893DOI Listing
March 2016

Conversion and Data Quality Assessment of Electronic Health Record Data at a Korean Tertiary Teaching Hospital to a Common Data Model for Distributed Network Research.

Healthc Inform Res 2016 Jan 31;22(1):54-8. Epub 2016 Jan 31.

Department of Biomedical Informatics, Ajou University School of Medicine, Suwon, Korea.; Observational Health Data Sciences and Informatics, New York, NY, USA.

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http://dx.doi.org/10.4258/hir.2016.22.1.54DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4756059PMC
January 2016

Evaluating performance of electronic healthcare records and spontaneous reporting data in drug safety signal detection.

Int J Clin Pharm 2015 Feb 9;37(1):94-104. Epub 2014 Dec 9.

Department of Medical Informatics, Erasmus University Medical Center, Rotterdam, The Netherlands,

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http://dx.doi.org/10.1007/s11096-014-0044-5DOI Listing
February 2015

Authors' reply to Hennessy and Leonard's comment on "Desideratum for evidence-based epidemiology".

Drug Saf 2015 Jan;38(1):105-7

Siemens Medical Solutions, Malvern, PA, USA,

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http://dx.doi.org/10.1007/s40264-014-0254-8DOI Listing
January 2015

ContextD: an algorithm to identify contextual properties of medical terms in a Dutch clinical corpus.

BMC Bioinformatics 2014 Nov 29;15:373. Epub 2014 Nov 29.

Department of Medical Informatics, Erasmus Medical Center, P.O. Box 2040, Rotterdam, CA, 3000, Netherlands.

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http://dx.doi.org/10.1186/s12859-014-0373-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4264258PMC
November 2014

Risk of upper gastrointestinal bleeding from different drug combinations.

Gastroenterology 2014 Oct 14;147(4):784-792.e9; quiz e13-4. Epub 2014 Jun 14.

Department of Medical Informatics, Erasmus Medical Center, Rotterdam, The Netherlands; Department of Epidemiology, Erasmus Medical Center, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1053/j.gastro.2014.06.007DOI Listing
October 2014

Interpreting observational studies: why empirical calibration is needed to correct p-values.

Stat Med 2014 Jan 30;33(2):209-18. Epub 2013 Jul 30.

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, Rotterdam, The Netherlands; Observational Medical Outcomes Partnership, Foundation for the National Institutes of Health, Bethesda, MD, U.S.A.

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http://dx.doi.org/10.1002/sim.5925DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4285234PMC
January 2014

Discussion: An estimate of the science-wise false discovery rate and application to the top medical literature.

Biostatistics 2014 Jan 25;15(1):36-9; discussion 39-45. Epub 2013 Sep 25.

Observational Medical Outcomes Partnership, Foundation for the National Institutes of Health, Bethesda, MD 20814, USAJanssen Research and Development LLC, Titusville, NJ 08560, USA.

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http://dx.doi.org/10.1093/biostatistics/kxt037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3862211PMC
January 2014

Multiple self-controlled case series for large-scale longitudinal observational databases.

Biometrics 2013 Dec 11;69(4):893-902. Epub 2013 Oct 11.

Department of Statistics, Columbia University, New York, New York, U.S.A.

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http://dx.doi.org/10.1111/biom.12078DOI Listing
December 2013

Idiopathic acute liver injury in paediatric outpatients: incidence and signal detection in two European countries.

Drug Saf 2013 Oct;36(10):1007-16

Campania Regional Center of Pharmacovigilance and Pharmacoepidemiology, Department of Experimental Medicine, Pharmacology Section, Second University of Naples, Via L. De Crecchio, 7, 80138, Naples, Italy,

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http://dx.doi.org/10.1007/s40264-013-0045-7DOI Listing
October 2013

Desideratum for evidence based epidemiology.

Drug Saf 2013 Oct;36 Suppl 1:S5-14

Siemens Health Services, Malvern, PA, USA,

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http://dx.doi.org/10.1007/s40264-013-0102-2DOI Listing
October 2013

Defining a reference set to support methodological research in drug safety.

Drug Saf 2013 Oct;36 Suppl 1:S33-47

Janssen Research and Development LLC, 1125 Trenton-Harbourton Road, Room K30205, PO Box 200, Titusville, NJ, 08560, USA,

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http://link.springer.com/content/pdf/10.1007%2Fs40264-013-00
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http://link.springer.com/10.1007/s40264-013-0097-8
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http://dx.doi.org/10.1007/s40264-013-0097-8DOI Listing
October 2013

Empirical performance of the case-control method: lessons for developing a risk identification and analysis system.

Drug Saf 2013 Oct;36 Suppl 1:S73-82

Department of Statistics, Columbia University, 1255 Amsterdam Avenue, New York, NY, 10027, USA,

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http://link.springer.com/10.1007/s40264-013-0105-z
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http://dx.doi.org/10.1007/s40264-013-0105-zDOI Listing
October 2013

Empirical performance of the self-controlled case series design: lessons for developing a risk identification and analysis system.

Drug Saf 2013 Oct;36 Suppl 1:S83-93

Department of Biomathematics, David Geffen School of Medicine at UCLA, University of California, Los Angeles, CA, USA,

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http://dx.doi.org/10.1007/s40264-013-0100-4DOI Listing
October 2013

Empirical performance of a self-controlled cohort method: lessons for developing a risk identification and analysis system.

Drug Saf 2013 Oct;36 Suppl 1:S95-106

Janssen Research and Development LLC, 1125 Trenton-Harbourton Road, Room K30205, PO Box 200, Titusville, NJ, 08560, USA,

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http://dx.doi.org/10.1007/s40264-013-0101-3DOI Listing
October 2013

Empirical performance of the calibrated self-controlled cohort analysis within temporal pattern discovery: lessons for developing a risk identification and analysis system.

Drug Saf 2013 Oct;36 Suppl 1:S107-21

Uppsala Monitoring Centre, WHO Collaborating Centre for International Drug Monitoring, Uppsala, Sweden,

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http://dx.doi.org/10.1007/s40264-013-0095-xDOI Listing
October 2013

Evaluation of disproportionality safety signaling applied to healthcare databases.

Drug Saf 2013 Oct;36 Suppl 1:S123-32

Oracle Health Sciences, Burlington, Massachusetts, USA,

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http://dx.doi.org/10.1007/s40264-013-0106-yDOI Listing
October 2013

Empirical performance of LGPS and LEOPARD: lessons for developing a risk identification and analysis system.

Drug Saf 2013 Oct;36 Suppl 1:S133-42

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 2040, 3000 CA, Rotterdam, The Netherlands,

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http://dx.doi.org/10.1007/s40264-013-0107-xDOI Listing
October 2013

A comparison of the empirical performance of methods for a risk identification system.

Drug Saf 2013 Oct;36 Suppl 1:S143-58

Janssen Research and Development LLC, 1125 Trenton-Harbourton Road, Room K30205, PO Box 200, Titusville, NJ, 08560, USA,

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http://dx.doi.org/10.1007/s40264-013-0108-9DOI Listing
October 2013

Evaluating performance of risk identification methods through a large-scale simulation of observational data.

Drug Saf 2013 Oct;36 Suppl 1:S171-80

Janssen Research and Development LLC, 1125 Trenton-Harbourton Road, Room K30205, PO Box 200, Titusville, NJ, 08560, USA,

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http://dx.doi.org/10.1007/s40264-013-0110-2DOI Listing
October 2013

Alternative outcome definitions and their effect on the performance of methods for observational outcome studies.

Drug Saf 2013 Oct;36 Suppl 1:S181-93

AstraZeneca PLC, 35 Gatehouse Drive, Waltham, MA, 02451, USA,

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http://dx.doi.org/10.1007/s40264-013-0111-1DOI Listing
October 2013

Automatic generation of case-detection algorithms to identify children with asthma from large electronic health record databases.

Pharmacoepidemiol Drug Saf 2013 Aug 17;22(8):826-33. Epub 2013 Apr 17.

Department of Medical Informatics, Erasmus University Medical Center, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1002/pds.3438DOI Listing
August 2013

Improving sensitivity of machine learning methods for automated case identification from free-text electronic medical records.

BMC Med Inform Decis Mak 2013 Mar 2;13:30. Epub 2013 Mar 2.

Department of Medical Informatics, Erasmus Medical Center, P,O, Box 2040, Rotterdam 3000CA, Netherlands.

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http://dx.doi.org/10.1186/1472-6947-13-30DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3602667PMC
March 2013

Automating classification of free-text electronic health records for epidemiological studies.

Pharmacoepidemiol Drug Saf 2012 Jun 24;21(6):651-8. Epub 2012 Jan 24.

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1002/pds.3205DOI Listing
June 2012

Electronic healthcare databases for active drug safety surveillance: is there enough leverage?

Pharmacoepidemiol Drug Saf 2012 Jun 8;21(6):611-21. Epub 2012 Feb 8.

Department of Medical Informatics, Erasmus Medical Center, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1002/pds.3197DOI Listing
June 2012

Safety surveillance of longitudinal databases: further methodological considerations.

Pharmacoepidemiol Drug Saf 2012 Jun;21(6):670-2; author reply 673-5

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http://dx.doi.org/10.1002/pds.3259DOI Listing
June 2012

Literature-aided interpretation of gene expression data with the weighted global test.

Brief Bioinform 2011 Sep 22;12(5):518-29. Epub 2010 Dec 22.

Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands.

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http://dx.doi.org/10.1093/bib/bbq082DOI Listing
September 2011

Methods for drug safety signal detection in longitudinal observational databases: LGPS and LEOPARD.

Pharmacoepidemiol Drug Saf 2011 Mar 13;20(3):292-9. Epub 2010 Oct 13.

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1002/pds.2051DOI Listing
March 2011

GeneE: gene and protein query expansion with disambiguation.

Bioinformatics 2010 Jan 16;26(1):147-8. Epub 2009 Oct 16.

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 2040, 3000 CA, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1093/bioinformatics/btp597DOI Listing
January 2010

A dictionary to identify small molecules and drugs in free text.

Bioinformatics 2009 Nov 16;25(22):2983-91. Epub 2009 Sep 16.

Department of Health Risk Analysis and Toxicology, Maastricht University, Maastricht, The Netherlands.

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http://dx.doi.org/10.1093/bioinformatics/btp535DOI Listing
November 2009

Novel protein-protein interactions inferred from literature context.

PLoS One 2009 Nov 18;4(11):e7894. Epub 2009 Nov 18.

Biosemantics Association, Department of Human Genetics, Leiden University Medical Center, Leiden, and Department of Medical Informatics, Erasmus University Medical Center, Rotterdam, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0007894PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2774517PMC
November 2009

Anni 2.0: a multipurpose text-mining tool for the life sciences.

Genome Biol 2008 12;9(6):R96. Epub 2008 Jun 12.

Department of Medical Informatics, Erasmus MC University Medical Center, Dr, Molewaterplein, Rotterdam, 3015 GE, The Netherlands.

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http://genomebiology.biomedcentral.com/articles/10.1186/gb-2
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http://dx.doi.org/10.1186/gb-2008-9-6-r96DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2481428PMC
August 2008

Literature-based concept profiles for gene annotation: the issue of weighting.

Int J Med Inform 2008 May 10;77(5):354-62. Epub 2007 Sep 10.

Erasmus University Medical Centre, Department of Medical Informatics, P.O. Box 2040, 3000 CA Rotterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.ijmedinf.2007.07.004DOI Listing
May 2008

Jane: suggesting journals, finding experts.

Bioinformatics 2008 Mar 28;24(5):727-8. Epub 2008 Jan 28.

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, 3000 CA, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1093/bioinformatics/btn006DOI Listing
March 2008

Evaluation of techniques for increasing recall in a dictionary approach to gene and protein name identification.

J Biomed Inform 2007 Jun 24;40(3):316-24. Epub 2006 Sep 24.

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 1738, 3000 DR, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.jbi.2006.09.002DOI Listing
June 2007

Do self-statements enhance the effectiveness of virtual reality exposure therapy? A comparative evaluation in acrophobia.

Cyberpsychol Behav 2007 Jun;10(3):362-70

Department of Clinical Psychology, University of Amsterdam, Roetersstraat 15, 1018 WB Amsterdam, The Netherlands.

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http://dx.doi.org/10.1089/cpb.2006.9943DOI Listing
June 2007

Fear of flying treatment methods: virtual reality exposure vs. cognitive behavioral therapy.

Aviat Space Environ Med 2007 Feb;78(2):121-8

Department of Clinical Psychology, University of Amsterdam, Amsterdam, The Netherlands.

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February 2007

Word sense disambiguation in the biomedical domain: an overview.

J Comput Biol 2005 Jun;12(5):554-65

Biosemantics Group, Medical Informatics Department, Erasmus Medical Center, Dr. Molewaterplein 50, 3015 GE, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1089/cmb.2005.12.554DOI Listing
June 2005

Thesaurus-based disambiguation of gene symbols.

BMC Bioinformatics 2005 Jun 16;6:149. Epub 2005 Jun 16.

Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 1738, 3000 DR Rotterdam, The Netherlands.

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http://dx.doi.org/10.1186/1471-2105-6-149DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1183190PMC
June 2005

Exploratory design and evaluation of a user interface for virtual reality exposure therapy.

Stud Health Technol Inform 2002 ;85:468-74

Department of Mediamatics, Delft University of Technology, Mekelweg 4, 2628 CD, Delft, the Netherlands.

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November 2004

Treatment of acrophobia in virtual reality: the role of immersion and presence.

Behav Res Ther 2004 Feb;42(2):229-39

University of Amsterdam, Department of Clinical Psychology, Roetersstraat 15, Amsterdam 1018 WB, Netherlands.

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http://dx.doi.org/10.1016/S0005-7967(03)00139-6DOI Listing
February 2004