Mark F Ciaccio

Mark F Ciaccio

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Mark F Ciaccio

Mark F Ciaccio

Publications by authors named "Mark F Ciaccio"

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Microwestern Arrays for Systems-Level Analysis of SH2 Domain-Containing Proteins.

Methods Mol Biol 2017 ;1555:453-473

Independent Biotechnology Professional, Moscow, ID, 83843, USA.

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http://link.springer.com/10.1007/978-1-4939-6762-9_27
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http://dx.doi.org/10.1007/978-1-4939-6762-9_27DOI Listing
February 2018

Identification of Novel Protein Expression Changes Following Cisplatin Treatment and Application to Combination Therapy.

J Proteome Res 2017 11 29;16(11):4227-4236. Epub 2017 Sep 29.

Department of Medicine, ‡Committee on Clinical Pharmacology and Pharmacogenomics, ∥Ben May Department for Cancer Research; ⊥Committee on Genetics, Genomics and Systems Biology; #The Institute for Genomics and Systems Biology; ∇Committee on Cancer Biology; and □Department of Human Genetics, The University of Chicago , Chicago, Illinois 60637, United States.

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http://dx.doi.org/10.1021/acs.jproteome.7b00576DOI Listing
November 2017

The DIONESUS algorithm provides scalable and accurate reconstruction of dynamic phosphoproteomic networks to reveal new drug targets.

Integr Biol (Camb) 2015 Jul;7(7):776-91

Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL 60208, USA.

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http://dx.doi.org/10.1039/c5ib00065cDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4511116PMC
July 2015

Enhanced prediction of Src homology 2 (SH2) domain binding potentials using a fluorescence polarization-derived c-Met, c-Kit, ErbB, and androgen receptor interactome.

Mol Cell Proteomics 2014 Jul 12;13(7):1705-23. Epub 2014 Apr 12.

From the ‡Committee on Cancer Biology, ¶Committee on Genetics, Genomics, and Systems Biology, and

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http://dx.doi.org/10.1074/mcp.M113.034876DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4083110PMC
July 2014

A systems approach to integrative biology: an overview of statistical methods to elucidate association and architecture.

Integr Comp Biol 2014 Jul 9;54(2):296-306. Epub 2014 May 9.

*Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL, USA; Interdepartmental Biological Sciences, Northwestern University, Evanston, IL, USA*Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL, USA; Interdepartmental Biological Sciences, Northwestern University, Evanston, IL, USA

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http://dx.doi.org/10.1093/icb/icu037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148605PMC
July 2014

Comprehensive binary interaction mapping of SH2 domains via fluorescence polarization reveals novel functional diversification of ErbB receptors.

PLoS One 2012 4;7(9):e44471. Epub 2012 Sep 4.

The Committee on Genetics, Genomics, and Systems Biology, The Ben May Department for Cancer Research and the Institute for Genomics and Systems Biology, The Gwen and Jules Knapp Center for Biomedical Discovery, The University of Chicago, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0044471PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3433420PMC
January 2013

Effect of complementary pathway blockade on efficacy of combination enzastaurin and rapamycin.

Head Neck 2011 Dec 24;33(12):1774-82. Epub 2011 Mar 24.

Department of Medicine, University of Chicago, Chicago, Illinois, USA.

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http://dx.doi.org/10.1002/hed.21701DOI Listing
December 2011

Systems analysis of EGF receptor signaling dynamics with microwestern arrays.

Nat Methods 2010 Feb 24;7(2):148-55. Epub 2010 Jan 24.

The Ben May Department for Cancer Research and the Institute for Genomics and Systems Biology, The University of Chicago, Chicago, Illinois, USA.

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http://dx.doi.org/10.1038/nmeth.1418DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2881471PMC
February 2010

Systems-level analysis of ErbB4 signaling in breast cancer: a laboratory to clinical perspective.

Mol Cancer Res 2008 Jun;6(6):885-91

Gordon Center for Integrative Science, W306, The University of Chicago, 929 East 57th Street, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1158/1541-7786.MCR-07-0369DOI Listing
June 2008

Cytosolic prion protein toxicity is independent of cellular prion protein expression and prion propagation.

J Virol 2007 Mar 20;81(6):2831-7. Epub 2006 Dec 20.

Department of Neurology, University of Chicago, MC2030, 5841 South Maryland Avenue, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1128/JVI.02157-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1866012PMC
March 2007