Publications by authors named "Mark A van de Wiel"

99Publications

Drug sensitivity prediction with normal inverse Gaussian shrinkage informed by external data.

Biom J 2020 Jul 23. Epub 2020 Jul 23.

MRC Biostatistics Unit, University of Cambridge, Cambridge Institute of Public Health, Forvie Site, Robinson Way, Cambridge Biomedical Campus, Cambridge, United Kingdom.

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July 2020

Outcome prediction of head and neck squamous cell carcinoma by MRI radiomic signatures.

Eur Radiol 2020 Nov 4;30(11):6311-6321. Epub 2020 Jun 4.

Radiology and Nuclear Medicine, Cancer Center Amsterdam, Amsterdam UMC, Vrije Universiteit Amsterdam, De Boelelaan 1117, 1081 HV, Amsterdam, The Netherlands.

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November 2020

Adaptive group-regularized logistic elastic net regression.

Biostatistics 2019 Dec 30. Epub 2019 Dec 30.

Department of Epidemiology & Biostatistics, Amsterdam Public Health Research Institute, Amsterdam University Medical Centers, PO Box 7057, 1007 MB Amsterdam, The Netherlands and MRC Biostatistics Unit, University of Cambridge, Cambridge CB2 0SR, UK.

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December 2019

PRECISE: a domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors.

Bioinformatics 2019 07;35(14):i510-i519

Computational Cancer Biology, Division of Molecular Carcinogenesis, Oncode Institute, the Netherlands Cancer Institute, Amsterdam CX, The Netherlands.

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July 2019

Molecular Characterization of Locally Relapsed Head and Neck Cancer after Concomitant Chemoradiotherapy.

Clin Cancer Res 2019 12 22;25(23):7256-7265. Epub 2019 Aug 22.

Amsterdam UMC, Vrije Universiteit Amsterdam, Otolaryngology/Head & Neck Surgery, Cancer Center Amsterdam, Amsterdam, the Netherlands.

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December 2019

Learning from a lot: Empirical Bayes for high-dimensional model-based prediction.

Scand Stat Theory Appl 2019 Mar 1;46(1):2-25. Epub 2018 Jun 1.

Department of Epidemiology and Biostatistics, Amsterdam Public Health Research Institute VU University Medical Center Amsterdam The Netherlands.

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March 2019

Improved high-dimensional prediction with Random Forests by the use of co-data.

BMC Bioinformatics 2017 12 28;18(1):584. Epub 2017 Dec 28.

Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, 1007 MB, The Netherlands.

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December 2017

Blood-based metabolic signatures in Alzheimer's disease.

Alzheimers Dement (Amst) 2017 6;8:196-207. Epub 2017 Sep 6.

Neurochemistry Laboratory and Biobank, Department of Clinical Chemistry, Amsterdam Neuroscience, VU University Medical Center Amsterdam, Amsterdam, The Netherlands.

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September 2017

Methods for significance testing of categorical covariates in logistic regression models after multiple imputation: power and applicability analysis.

BMC Med Res Methodol 2017 Aug 22;17(1):129. Epub 2017 Aug 22.

Department of Epidemiology & Biostatistics, VU University Medical Center, Amsterdam, The Netherlands.

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August 2017

A Strategy to Find Suitable Reference Genes for miRNA Quantitative PCR Analysis and Its Application to Cervical Specimens.

J Mol Diagn 2017 09;19(5):625-637

Department of Pathology, VU University Medical Center, Amsterdam, the Netherlands. Electronic address:

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September 2017

Gene Network Reconstruction using Global-Local Shrinkage Priors.

Ann Appl Stat 2017 Mar;11(1):41-68

Vrije Universiteit Amsterdam, Department of Mathematics, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands.

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March 2017

An empirical Bayes approach to network recovery using external knowledge.

Biom J 2017 Sep 10;59(5):932-947. Epub 2017 Apr 10.

Department of Mathematics, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081, HV Amsterdam, The Netherlands.

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September 2017