Mario Ventura

Mario Ventura

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Mario Ventura

Mario Ventura

Publications by authors named "Mario Ventura"

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The birth of a human-specific neural gene by incomplete duplication and gene fusion.

Genome Biol 2017 03 9;18(1):49. Epub 2017 Mar 9.

Department of Genome Sciences, University of Washington School of Medicine, 3720 15 Ave NE, S413C, Box 355065, Seattle, WA, 98195-5065, USA.

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http://dx.doi.org/10.1186/s13059-017-1163-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5345166PMC
March 2017

Discovery of large genomic inversions using long range information.

BMC Genomics 2017 01 10;18(1):65. Epub 2017 Jan 10.

Department of Computer Engineering, Bilkent University, Bilkent, 06800, Ankara, Turkey.

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http://dx.doi.org/10.1186/s12864-016-3444-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5223412PMC
January 2017

Inter-varietal structural variation in grapevine genomes.

Plant J 2016 11 16;88(4):648-661. Epub 2016 Sep 16.

Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)-Unità di ricerca per l'uva da tavola e la vitivinicoltura in ambiente mediterraneo, Research Unit for viticulture and enology in Southern Italy, Turi (BA), Italy.

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http://dx.doi.org/10.1111/tpj.13274DOI Listing
November 2016

Gibbon genome and the fast karyotype evolution of small apes.

Nature 2014 Sep;513(7517):195-201

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.

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http://dx.doi.org/10.1038/nature13679DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4249732PMC
September 2014

Characterization and in vitro differentiation potency of early-passage canine amnion- and umbilical cord-derived mesenchymal stem cells as related to gestational age.

Mol Reprod Dev 2014 Jun 18;81(6):539-51. Epub 2014 Apr 18.

Veterinary Clinics and Animal Productions Section, Department for Emergency and Organ Transplantation, University of Bari Aldo Moro, Valenzano, Italy.

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http://dx.doi.org/10.1002/mrd.22322DOI Listing
June 2014

Hominoid fission of chromosome 14/15 and the role of segmental duplications.

Genome Res 2013 Nov 27;23(11):1763-73. Epub 2013 Sep 27.

Dipartimento di Biologia, Università degli Studi di Bari "Aldo Moro," Bari 70125, Italy;

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http://dx.doi.org/10.1101/gr.156240.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3814877PMC
November 2013

Great ape genetic diversity and population history.

Nature 2013 Jul 3;499(7459):471-5. Epub 2013 Jul 3.

Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, PRBB, Doctor Aiguader 88, Barcelona, Catalonia 08003, Spain.

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http://dx.doi.org/10.1038/nature12228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822165PMC
July 2013

Evolutionary dynamism of the primate LRRC37 gene family.

Genome Res 2013 Jan 11;23(1):46-59. Epub 2012 Oct 11.

Dipartimento di Biologia, Università degli Studi di Bari Aldo Moro, Bari 70126, Italy.

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http://dx.doi.org/10.1101/gr.138842.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3530683PMC
January 2013

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2.

Genome Res 2012 Jun 14;22(6):1036-49. Epub 2012 Mar 14.

Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA 98195, USA

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http://dx.doi.org/10.1101/gr.136556.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3371704PMC
June 2012

Alu repeat discovery and characterization within human genomes.

Genome Res 2011 Jun 3;21(6):840-9. Epub 2010 Dec 3.

School of Computing Science, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada.

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http://dx.doi.org/10.1101/gr.115956.110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3106317PMC
June 2011

Initial analysis of copy number variations in cattle selected for resistance or susceptibility to intestinal nematodes.

Mamm Genome 2011 Feb 3;22(1-2):111-21. Epub 2010 Dec 3.

Bovine Functional Genomics Laboratory, U.S. Department of Agriculture-Agricultural Research Service, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1007/s00335-010-9308-0DOI Listing
February 2011

Genome-wide characterization of centromeric satellites from multiple mammalian genomes.

Genome Res 2011 Jan 16;21(1):137-45. Epub 2010 Nov 16.

Department of Genome Sciences, Howard Hughes Medical Institute, University of Washington School of Medicine, Seattle, Washington 98195, USA.

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http://dx.doi.org/10.1101/gr.111278.110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3012921PMC
January 2011

Analysis of recent segmental duplications in the bovine genome.

BMC Genomics 2009 Dec 1;10:571. Epub 2009 Dec 1.

USDA, ARS, ANRI, Bovine Functional Genomics Laboratory, Beltsville, Maryland 20705, USA.

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http://dx.doi.org/10.1186/1471-2164-10-571DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2796684PMC
December 2009

Characterization of six human disease-associated inversion polymorphisms.

Hum Mol Genet 2009 Jul 21;18(14):2555-66. Epub 2009 Apr 21.

Department of Genome Sciences, Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA.

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http://dx.doi.org/10.1093/hmg/ddp187DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2701327PMC
July 2009

The genomic architecture of segmental duplications and associated copy number variants in dogs.

Genome Res 2009 Mar 7;19(3):491-9. Epub 2009 Jan 7.

Department of Genome Sciences, University of Washington, Seattle, Washington 98195, USA.

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http://dx.doi.org/10.1101/gr.084715.108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2661811PMC
March 2009

Death and resurrection of the human IRGM gene.

PLoS Genet 2009 Mar 6;5(3):e1000403. Epub 2009 Mar 6.

Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1000403DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2644816PMC
March 2009

Sequencing human-gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites.

Genome Res 2009 Feb 24;19(2):178-90. Epub 2008 Nov 24.

Department of Genome Sciences, Howard Hughes Medical Institute, University of Washington School of Medicine, Seattle, Washington 98195, USA.

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http://dx.doi.org/10.1101/gr.086041.108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2652201PMC
February 2009

Hominoid chromosomal rearrangements on 17q map to complex regions of segmental duplication.

Genome Biol 2008 7;9(2):R28. Epub 2008 Feb 7.

Department of Genetics and Microbiology, University of Bari, Via Amendola, Bari, 70126, Italy.

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http://dx.doi.org/10.1186/gb-2008-9-2-r28DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2374708PMC
May 2008

Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution.

Nat Genet 2007 Nov 7;39(11):1361-8. Epub 2007 Oct 7.

Department of Genome Sciences, University of Washington School of Medicine and the Howard Hughes Medical Institute, 1705 NE Pacific Street, Seattle, Washington 98195, USA.

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http://dx.doi.org/10.1038/ng.2007.9DOI Listing
November 2007

Organization and evolution of primate centromeric DNA from whole-genome shotgun sequence data.

PLoS Comput Biol 2007 Sep;3(9):1807-18

Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington, USA.

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http://dx.doi.org/10.1371/journal.pcbi.0030181DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994983PMC
September 2007

Evolutionary formation of new centromeres in macaque.

Science 2007 Apr;316(5822):243-6

Department of Genetics and Microbiology, University of Bari, 70126 Bari, Italy.

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http://dx.doi.org/10.1126/science.1140615DOI Listing
April 2007

Recurrent duplication-driven transposition of DNA during hominoid evolution.

Proc Natl Acad Sci U S A 2006 Nov 13;103(47):17626-31. Epub 2006 Nov 13.

Department of Genome Sciences and the Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA.

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http://dx.doi.org/10.1073/pnas.0605426103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1693797PMC
November 2006

A genome-wide survey of structural variation between human and chimpanzee.

Genome Res 2005 Oct 16;15(10):1344-56. Epub 2005 Sep 16.

Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.

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http://dx.doi.org/10.1101/gr.4338005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1240076PMC
October 2005

A genome-wide comparison of recent chimpanzee and human segmental duplications.

Nature 2005 Sep;437(7055):88-93

Howard Hughes Medical Institute, Department of Genome Sciences, University of Washington School of Medicine, 1705 NE Pacific Street, Seattle, Washington 98195, USA.

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http://dx.doi.org/10.1038/nature04000DOI Listing
September 2005

Punctuated duplication seeding events during the evolution of human chromosome 2p11.

Genome Res 2005 Jul 17;15(7):914-27. Epub 2005 Jun 17.

Department of Genetics and Center for Human Genetics, Case Western Reserve University School of Medicine and University Hospitals of Cleveland, Cleveland, Ohio 44106, USA.

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http://dx.doi.org/10.1101/gr.3916405DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1172035PMC
July 2005

Evidence for duplication of the human defensin gene DEFB4 in chromosomal region 8p22-23 and implications for the analysis of SNP allele distribution.

Genet Test 2004 ;8(3):325-7

Department of Oral Biology, University of Medicine and Dentistry of New Jersey, Newark, NJ 07103-2714, USA.

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http://dx.doi.org/10.1089/gte.2004.8.325DOI Listing
April 2005

Analysis of segmental duplications and genome assembly in the mouse.

Genome Res 2004 May;14(5):789-801

Department of Genetics, Center for Computational Genomics, Case Western Reserve University School of Medicine and University Hospitals of Cleveland, Cleveland, Ohio 4410, USA.

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http://dx.doi.org/10.1101/gr.2238404DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC479105PMC
May 2004

Human chromosome 16 conservation in primates.

Chromosome Res 2003 ;11(4):323-6

Sezione di Genetica, DAPEG, Via Amendola 165/A 70126 Bari, Italy.

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March 2004

Chromosome 6 phylogeny in primates and centromere repositioning.

Mol Biol Evol 2003 Sep 27;20(9):1506-12. Epub 2003 Jun 27.

Sezione di Genetica, DAPEG, Bari, Italy.

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http://dx.doi.org/10.1093/molbev/msg165DOI Listing
September 2003

Juxtacentromeric region of human chromosome 21: a boundary between centromeric heterochromatin and euchromatic chromosome arms.

Gene 2003 Jul;312:41-50

Institut de Génétique Humaine, CNRS UPR 1142, 141, rue de la Cardonille, 34396 Montpellier, France.

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http://dx.doi.org/10.1016/s0378-1119(03)00530-4DOI Listing
July 2003

BAGE genes generated by juxtacentromeric reshuffling in the Hominidae lineage are under selective pressure.

Genomics 2003 Apr;81(4):391-9

Institut de Génétique Humaine, CNRS UPR 1142, 141, Rue de la Cardonille, 34396 Montpellier, France.

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http://dx.doi.org/10.1016/s0888-7543(03)00025-9DOI Listing
April 2003

Analysis of chromosome conservation in Lemur catta studied by chromosome paints and BAC/PAC probes.

Chromosoma 2002 Dec 9;111(5):348-56. Epub 2002 Oct 9.

Sezione di Genetica, DAPEG, Via Amendola 165/A, 70126 Bari, Italy.

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http://dx.doi.org/10.1007/s00412-002-0215-3DOI Listing
December 2002

Evolutionary history of chromosome 10 in primates.

Chromosoma 2002 Nov 5;111(4):267-72. Epub 2002 Sep 5.

Sezione di Genetica, DAPEG, Via Amendola 165/A 70126 Bari, Italy.

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http://dx.doi.org/10.1007/s00412-002-0205-5DOI Listing
November 2002

Localization of a new highly repeated DNA sequence of Lemur cafta (Lemuridae, Strepsirhini).

Genome 2002 Oct;45(5):973-6

Università di Trieste, Dipartimento di Scienze della Riproduzione e dello Sviluppo, Italy.

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http://dx.doi.org/10.1139/g02-048DOI Listing
October 2002

MLL3, a new human member of the TRX/MLL gene family, maps to 7q36, a chromosome region frequently deleted in myeloid leukaemia.

Gene 2002 Feb;284(1-2):73-81

Institut de Génétique Humaine, CNRS UPR 1142, 141, rue de la Cardonille, 34396, Montpellier, France.

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http://dx.doi.org/10.1016/s0378-1119(02)00392-xDOI Listing
February 2002