Marilyn Safran

Marilyn Safran

UNVERIFIED PROFILE

Are you Marilyn Safran?   Register this Author

Register author
Marilyn Safran

Marilyn Safran

Publications by authors named "Marilyn Safran"

Are you Marilyn Safran?   Register this Author

27Publications

447Reads

37Profile Views

UTAP: User-friendly Transcriptome Analysis Pipeline.

BMC Bioinformatics 2019 Mar 25;20(1):154. Epub 2019 Mar 25.

Bioinformatics Unit, Department of Life Sciences Core Facilities, Weizmann Institute of Science, 76100, Rehovot, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12859-019-2728-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6434621PMC
March 2019

MalaCards: an amalgamated human disease compendium with diverse clinical and genetic annotation and structured search.

Nucleic Acids Res 2017 01 28;45(D1):D877-D887. Epub 2016 Nov 28.

Department of Molecular Genetics, the Weizmann Institute of Science, Rehovot, 76100, Israel

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkw1012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210521PMC
January 2017

Genic insights from integrated human proteomics in GeneCards.

Database (Oxford) 2016 5;2016. Epub 2016 Apr 5.

Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, 7610001, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/database/baw030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4820835PMC
October 2016

PathCards: multi-source consolidation of human biological pathways.

Database (Oxford) 2015 27;2015. Epub 2015 Feb 27.

Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/database/bav006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4343183PMC
September 2015

MalaCards: A Comprehensive Automatically-Mined Database of Human Diseases.

Curr Protoc Bioinformatics 2014 Sep 8;47:1.24.1-19. Epub 2014 Sep 8.

Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/0471250953.bi0124s47DOI Listing
September 2014

MalaCards: an integrated compendium for diseases and their annotation.

Database (Oxford) 2013 12;2013:bat018. Epub 2013 Apr 12.

Department of Molecular Genetics, Weizmann Institute of Science, 234 Hertzel St. Rehovot, 76100, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/database/bat018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625956PMC
June 2013

Non-redundant compendium of human ncRNA genes in GeneCards.

Bioinformatics 2013 Jan 19;29(2):255-61. Epub 2012 Nov 19.

Department of Molecular Genetics, The Weizmann Institute of Science, Rehovot 76100, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/bts676DOI Listing
January 2013

Omics data management and annotation.

Methods Mol Biol 2011 ;719:71-96

Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.

View Article

Download full-text PDF

Source
http://link.springer.com/10.1007/978-1-61779-027-0_3
Publisher Site
http://dx.doi.org/10.1007/978-1-61779-027-0_3DOI Listing
June 2011

GeneDecks: paralog hunting and gene-set distillation with GeneCards annotation.

OMICS 2009 Dec;13(6):477-87

Departments of Molecular Genetics, Weizmann Institute of Science , Rehovot 76100, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1089/omi.2009.0069DOI Listing
December 2009

GIFtS: annotation landscape analysis with GeneCards.

BMC Bioinformatics 2009 Oct 23;10:348. Epub 2009 Oct 23.

Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-10-348DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2774327PMC
October 2009

Novel definition files for human GeneChips based on GeneAnnot.

BMC Bioinformatics 2007 Nov 15;8:446. Epub 2007 Nov 15.

Department of Biomedical Sciences, University of Modena and Reggio Emilia, via G. Campi 287, 41100, Modena, Italy.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-8-446DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2216044PMC
November 2007

GeneTide--Terra Incognita Discovery Endeavor: a new transcriptome focused member of the GeneCards/GeneNote suite of databases.

Nucleic Acids Res 2005 Jan;33(Database issue):D556-61

Department of Molecular Genetics, The Weizmann Institute of Science, Rehovot 76100, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gki122DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC540076PMC
January 2005

GeneLoc: exon-based integration of human genome maps.

Bioinformatics 2003 ;19 Suppl 1:i222-4

Weizmann Institute of Science, Rehovot, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btg1030DOI Listing
October 2004

GeneAnnot: comprehensive two-way linking between oligonucleotide array probesets and GeneCards genes.

Bioinformatics 2004 Jun 12;20(9):1457-8. Epub 2004 Feb 12.

Department of Biological Services, Weizmann Institute of Science, Rehovot, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/bth081DOI Listing
June 2004

GeneNote: whole genome expression profiles in normal human tissues.

C R Biol 2003 Oct-Nov;326(10-11):1067-72

Department of Molecular Genetics, The Weizmann Institute of Science, 76100 Rehovot, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.crvi.2003.09.012DOI Listing
May 2004

GeneAnnot: interfacing GeneCards with high-throughput gene expression compendia.

Brief Bioinform 2003 Dec;4(4):349-60

Bioinformatics Support Unit, Life Sciences Dept., Ben-Gurion University of the Negev, Beer-Sheva, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bib/4.4.349DOI Listing
December 2003

GeneCards 2002: towards a complete, object-oriented, human gene compendium.

Bioinformatics 2002 Nov;18(11):1542-3

Departments of Molecular Genetics Biological Services (Bioinformatics Unit) Molecular Cell Biology, The Weizmann Institute of Science, Rehovot, Israel.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/18.11.1542DOI Listing
November 2002