Maria Ninova

Maria Ninova

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Maria Ninova

Maria Ninova

Publications by authors named "Maria Ninova"

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Su(var)2-10 and the SUMO Pathway Link piRNA-Guided Target Recognition to Chromatin Silencing.

Mol Cell 2020 Feb 31;77(3):556-570.e6. Epub 2019 Dec 31.

California Institute of Technology, Division of Biology and Biological Engineering, 147-75, Pasadena, CA 91125, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2019.11.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7007863PMC
February 2020

The SUMO Ligase Su(var)2-10 Controls Hetero- and Euchromatic Gene Expression via Establishing H3K9 Trimethylation and Negative Feedback Regulation.

Mol Cell 2020 Feb 31;77(3):571-585.e4. Epub 2019 Dec 31.

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2019.09.033DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7007874PMC
February 2020

Genome-wide DNA sampling by Ago nuclease from the cyanobacterium .

RNA Biol 2020 Feb 3. Epub 2020 Feb 3.

Institute of Molecular Genetics, Russian Academy of Sciences, Moscow 123182, Russia.

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http://dx.doi.org/10.1080/15476286.2020.1724716DOI Listing
February 2020

The control of gene expression and cell identity by H3K9 trimethylation.

Development 2019 Sep 20;146(19). Epub 2019 Sep 20.

California Institute of Technology, Division of Biology and Biological Engineering, 147-75, 1200 East California Boulevard, Pasadena, CA 91125, USA

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http://dx.doi.org/10.1242/dev.181180DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6803365PMC
September 2019

Abundant expression of somatic transposon-derived piRNAs throughout Tribolium castaneum embryogenesis.

Genome Biol 2017 09 26;18(1):184. Epub 2017 Sep 26.

Faculty of Biology, Medicine and Health, University of Manchester, Michael Smith Building, Oxford Road, Manchester, M13 9PT, UK.

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http://dx.doi.org/10.1186/s13059-017-1304-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5613491PMC
September 2017

Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum.

Genome Biol Evol 2016 08 3;8(7):2133-44. Epub 2016 Aug 3.

Department of Biological and Medical Sciences, Oxford Brookes University, Gipsy Lane, Oxford, OX3 0BP, United Kingdom

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http://dx.doi.org/10.1093/gbe/evw143DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987109PMC
August 2016

Conservation and losses of non-coding RNAs in avian genomes.

PLoS One 2015 30;10(3):e0121797. Epub 2015 Mar 30.

Bioinformatics Group, Department of Computer Science; and Interdisciplinary Center for Bioinformatics, University of Leipzig, Härtelstrasse 16-18, D-04107 Leipzig, Germany; Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, D-04103 Leipzig, Germany; Fraunhofer Institute for Cell Therapy and Immunology, Perlickstrasse 1, D-04103 Leipzig, Germany; Department of Theoretical Chemistry of the University of Vienna, Währingerstrasse 17, A-1090 Vienna, Austria; Center for RNA in Technology and Health, Univ. Copenhagen, Grønnegårdsvej 3, Frederiksberg C, Denmark; Santa Fe Institute, 1399 Hyde Park Road, Santa Fe NM 87501, USA; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0121797PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4378963PMC
April 2016

Splicing-independent loading of TREX on nascent RNA is required for efficient expression of dual-strand piRNA clusters in Drosophila.

Genes Dev 2016 Apr;30(7):840-55

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, California 91125, USA;

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http://dx.doi.org/10.1101/gad.276030.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4826399PMC
April 2016

MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum.

Genome Res 2016 Jan 30;26(1):85-96. Epub 2015 Oct 30.

Faculty of Life Sciences, University of Manchester, Manchester, M13 9PT, United Kingdom.

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http://dx.doi.org/10.1101/gr.193367.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691753PMC
January 2016

Target repression induced by endogenous microRNAs: large differences, small effects.

PLoS One 2014 20;9(8):e104286. Epub 2014 Aug 20.

Faculty of Life Sciences, The University of Manchester, Manchester, United Kingdom.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0104286PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4139194PMC
May 2015

The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima.

Authors:
Ariel D Chipman David E K Ferrier Carlo Brena Jiaxin Qu Daniel S T Hughes Reinhard Schröder Montserrat Torres-Oliva Nadia Znassi Huaiyang Jiang Francisca C Almeida Claudio R Alonso Zivkos Apostolou Peshtewani Aqrawi Wallace Arthur Jennifer C J Barna Kerstin P Blankenburg Daniela Brites Salvador Capella-Gutiérrez Marcus Coyle Peter K Dearden Louis Du Pasquier Elizabeth J Duncan Dieter Ebert Cornelius Eibner Galina Erikson Peter D Evans Cassandra G Extavour Liezl Francisco Toni Gabaldón William J Gillis Elizabeth A Goodwin-Horn Jack E Green Sam Griffiths-Jones Cornelis J P Grimmelikhuijzen Sai Gubbala Roderic Guigó Yi Han Frank Hauser Paul Havlak Luke Hayden Sophie Helbing Michael Holder Jerome H L Hui Julia P Hunn Vera S Hunnekuhl LaRonda Jackson Mehwish Javaid Shalini N Jhangiani Francis M Jiggins Tamsin E Jones Tobias S Kaiser Divya Kalra Nathan J Kenny Viktoriya Korchina Christie L Kovar F Bernhard Kraus François Lapraz Sandra L Lee Jie Lv Christigale Mandapat Gerard Manning Marco Mariotti Robert Mata Tittu Mathew Tobias Neumann Irene Newsham Dinh N Ngo Maria Ninova Geoffrey Okwuonu Fiona Ongeri William J Palmer Shobha Patil Pedro Patraquim Christopher Pham Ling-Ling Pu Nicholas H Putman Catherine Rabouille Olivia Mendivil Ramos Adelaide C Rhodes Helen E Robertson Hugh M Robertson Matthew Ronshaugen Julio Rozas Nehad Saada Alejandro Sánchez-Gracia Steven E Scherer Andrew M Schurko Kenneth W Siggens DeNard Simmons Anna Stief Eckart Stolle Maximilian J Telford Kristin Tessmar-Raible Rebecca Thornton Maurijn van der Zee Arndt von Haeseler James M Williams Judith H Willis Yuanqing Wu Xiaoyan Zou Daniel Lawson Donna M Muzny Kim C Worley Richard A Gibbs Michael Akam Stephen Richards

PLoS Biol 2014 Nov 25;12(11):e1002005. Epub 2014 Nov 25.

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.

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http://dx.doi.org/10.1371/journal.pbio.1002005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4244043PMC
November 2014

Conserved temporal patterns of microRNA expression in Drosophila support a developmental hourglass model.

Genome Biol Evol 2014 Aug 27;6(9):2459-67. Epub 2014 Aug 27.

Faculty of Life Sciences, University of Manchester, Manchester, United Kingdom

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http://dx.doi.org/10.1093/gbe/evu183DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4202322PMC
August 2014

Clusters of microRNAs emerge by new hairpins in existing transcripts.

Nucleic Acids Res 2013 Sep 17;41(16):7745-52. Epub 2013 Jun 17.

Faculty of Life Sciences, University of Manchester, Michael Smith Building, Oxford Road, Manchester M13 9PT, UK.

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http://dx.doi.org/10.1093/nar/gkt534DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3763532PMC
September 2013

Multiple products from microRNA transcripts.

Biochem Soc Trans 2013 Aug;41(4):850-4

Faculty of Life Sciences, Michael Smith Building, Oxford Road, University of Manchester, Manchester M13 9PT, UK.

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http://dx.doi.org/10.1042/BST20130035DOI Listing
August 2013