Publications by authors named "Maria A Doyle"

31Publications

Germline whole exome sequencing of a family with appendiceal mucinous tumours presenting with pseudomyxoma peritonei.

BMC Cancer 2020 May 1;20(1):369. Epub 2020 May 1.

Research Division, Cancer Genetics Laboratory, Peter MacCallum Cancer Centre, Victorian Comprehensive Cancer Centre Building, 305 Grattan St., Melbourne, Victoria, VIC 3000, Australia.

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http://dx.doi.org/10.1186/s12885-020-6705-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7195761PMC
May 2020

The RNA workbench 2.0: next generation RNA data analysis.

Nucleic Acids Res 2019 07;47(W1):W511-W515

Bioinformatics Group, Department of Computer Science, Albert-Ludwigs-University Freiburg, Georges-Köhler-Allee 106, Freiburg 79110, Germany.

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http://dx.doi.org/10.1093/nar/gkz353DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6602469PMC
July 2019

Id2 and E Proteins Orchestrate the Initiation and Maintenance of MLL-Rearranged Acute Myeloid Leukemia.

Cancer Cell 2016 07 30;30(1):59-74. Epub 2016 Jun 30.

Cancer Therapeutics Program, Peter MacCallum Cancer Centre, St. Andrews Place, East Melbourne, 3002 VIC, Australia; The Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, 3010 VIC, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2016.05.019DOI Listing
July 2016

Mutational landscape of mucinous ovarian carcinoma and its neoplastic precursors.

Genome Med 2015 7;7(1):87. Epub 2015 Aug 7.

Cancer Genetics Laboratory, Peter MacCallum Cancer Centre, East Melbourne, Victoria Australia ; Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria Australia ; Department of Pathology, University of Melbourne, Parkville, Victoria Australia.

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http://dx.doi.org/10.1186/s13073-015-0210-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4528310PMC
August 2015

Loss of heterozygosity: what is it good for?

BMC Med Genomics 2015 Aug 1;8:45. Epub 2015 Aug 1.

Cancer Genetics Laboratory, Peter MacCallum Cancer Centre, East Melbourne, Victoria, Australia.

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http://dx.doi.org/10.1186/s12920-015-0123-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4522148PMC
August 2015

Whole-genome characterization of chemoresistant ovarian cancer.

Nature 2015 May;521(7553):489-94

1] Peter MacCallum Cancer Centre, East Melbourne, Victoria 3002, Australia [2] Department of Pathology, University of Melbourne, Parkville, Victoria 3052, Australia [3] Sir Peter MacCallum Cancer Centre Department of Oncology, University of Melbourne, Parkville, Victoria 3052, Australia [4] Ovarian Cancer Action Research Centre, Department of Surgery and Cancer, Imperial College London, London W12 0HS, UK [5] Department of Biochemistry and Molecular Biology, University of Melbourne, Parkville, Victoria 3052, Australia.

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http://dx.doi.org/10.1038/nature14410DOI Listing
May 2015

Studying cancer genomics through next-generation DNA sequencing and bioinformatics.

Methods Mol Biol 2014 ;1168:83-98

Peter MacCallum Cancer Centre, St Andrews Place, East Melbourne, VIC, 3002, Australia,

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http://dx.doi.org/10.1007/978-1-4939-0847-9_6DOI Listing
January 2015

The drug vehicle and solvent N-methylpyrrolidone is an immunomodulator and antimyeloma compound.

Cell Rep 2014 May 9;7(4):1009-19. Epub 2014 May 9.

Research Division, Peter MacCallum Cancer Centre, Melbourne, VIC 3002, Australia; Sir Peter MacCallum Department of Oncology, University of Melbourne, Melbourne, VIC 3002, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2014.04.008DOI Listing
May 2014

A simple consensus approach improves somatic mutation prediction accuracy.

Genome Med 2013 30;5(9):90. Epub 2013 Sep 30.

Peter MacCallum Cancer Centre, Cancer Genetics Laboratory, St. Andrew's Place, East Melbourne, Victoria, Australia ; Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia ; Department of Pathology, University of Melbourne, Parkville, Victoria, Australia.

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http://dx.doi.org/10.1186/gm494DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978449PMC
May 2014

RNF43 is a tumour suppressor gene mutated in mucinous tumours of the ovary.

J Pathol 2013 Feb;229(3):469-76

Victorian Breast Cancer Research Consortium (VBCRC), Cancer Genetics Laboratory, Peter MacCallum Cancer Centre, East Melbourne, Victoria, Australia.

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http://dx.doi.org/10.1002/path.4134DOI Listing
February 2013

CONTRA: copy number analysis for targeted resequencing.

Bioinformatics 2012 May 2;28(10):1307-13. Epub 2012 Apr 2.

Bioinformatics Core Facility, Peter MacCallum Cancer Centre, VIC 3002, Australia.

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http://dx.doi.org/10.1093/bioinformatics/bts146DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3348560PMC
May 2012

Next-generation sequencing for cancer diagnostics: a practical perspective.

Clin Biochem Rev 2011 Nov;32(4):177-95

Molecular Pathology, Hunter Area Pathology Service, Newcastle, NSW 2310;

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3219767PMC
November 2011

Identification of attractive drug targets in neglected-disease pathogens using an in silico approach.

PLoS Negl Trop Dis 2010 Aug 24;4(8):e804. Epub 2010 Aug 24.

Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, United States of America.

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http://dx.doi.org/10.1371/journal.pntd.0000804DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2927427PMC
August 2010

Drug target prediction and prioritization: using orthology to predict essentiality in parasite genomes.

BMC Genomics 2010 Apr 3;11:222. Epub 2010 Apr 3.

Department of Biochemistry & Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Victoria, 3010, Australia.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-11-222DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2867826PMC
April 2010

Central carbon metabolism of Leishmania parasites.

Parasitology 2010 Aug 17;137(9):1303-13. Epub 2010 Feb 17.

Department of Biochemistry and Molecular Biology, University of Melbourne, 30 Flemington Rd, Parkville, 3010, Victoria, Australia.

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http://dx.doi.org/10.1017/S0031182010000077DOI Listing
August 2010

LeishCyc: a biochemical pathways database for Leishmania major.

BMC Syst Biol 2009 Jun 5;3:57. Epub 2009 Jun 5.

Department of Biochemistry and Molecular Biology, University of Melbourne, VIC, Australia.

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http://dx.doi.org/10.1186/1752-0509-3-57DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2700086PMC
June 2009