Publications by authors named "Marco Mangone"

18Publications

Transcriptome changes during the initiation and progression of Duchenne muscular dystrophy in Caenorhabditis elegans.

Hum Mol Genet 2020 Jun;29(10):1607-1623

Virginia G. Piper Center for Personalized Diagnostics, The Biodesign Institute at Arizona State University, 1001 S McAllister Ave, Tempe, AZ 85281, USA.

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June 2020

The 3' UTRome v2 resource for studying mRNA cleavage and polyadenylation, 3'-UTR biology, and miRNA targeting.

Genome Res 2019 12 19;29(12):2104-2116. Epub 2019 Nov 19.

Molecular and Cellular Biology Graduate Program, School of Life Sciences, Tempe, Arizona 85287.

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December 2019

miRNA Profiling for Early Detection and Treatment of Duchenne Muscular Dystrophy.

Int J Mol Sci 2019 Sep 19;20(18). Epub 2019 Sep 19.

Virginia G. Piper Center for Personalized Diagnostics, The Biodesign Institute at Arizona State University, 1001 S McAllister Ave, Tempe, AZ 85287, USA.

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September 2019

ALG-1 Influences Accurate mRNA Splicing Patterns in the Intestine and Body Muscle Tissues by Modulating Splicing Factor Activities.

Genetics 2019 07 9;212(3):931-951. Epub 2019 May 9.

Molecular and Cellular Biology Graduate Program, School of Life Sciences, Arizona State University, Tempe, Arizona 85287

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July 2019

Alternative Polyadenylation Directs Tissue-Specific miRNA Targeting in Somatic Tissues.

Genetics 2017 06 27;206(2):757-774. Epub 2017 Mar 27.

Molecular and Cellular Biology Graduate Program, Arizona State University, Tempe, Arizona 85281

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June 2017

Evolutionary patterns of metazoan microRNAs reveal targeting principles in the let-7 and miR-10 families.

Genome Res 2017 01 7;27(1):53-63. Epub 2016 Dec 7.

Virginia G. Piper Center For Personalized Diagnostics, The Biodesign Institute at Arizona State University, Tempe, Arizona 85287, USA.

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January 2017

A human 3'UTR clone collection to study post-transcriptional gene regulation.

BMC Genomics 2015 Dec 9;16:1036. Epub 2015 Dec 9.

Molecular and Cellular Biology Graduate Program, Arizona State University, Tempe, AZ, USA.

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December 2015

miRNAs as Biomarkers in Chronic Myelogenous Leukemia.

Drug Dev Res 2015 Sep 18;76(6):278-85. Epub 2015 Aug 18.

Molecular and Cellular Biology Graduate Program, Arizona State University, Tempe, AZ, USA.

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September 2015

Detection of miRNA Targets in High-throughput Using the 3'LIFE Assay.

J Vis Exp 2015 May 25(99):e52647. Epub 2015 May 25.

School of Life Sciences, Arizona State University; Biodesign Institute, Arizona State University;

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May 2015

Comparative RNA-Seq analysis reveals pervasive tissue-specific alternative polyadenylation in Caenorhabditis elegans intestine and muscles.

BMC Biol 2015 Jan 20;13. Epub 2015 Jan 20.

Molecular and Cellular Biology Graduate Program, Arizona State University, Tempe, AZ, USA.

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January 2015

3'LIFE: a functional assay to detect miRNA targets in high-throughput.

Nucleic Acids Res 2014 29;42(17):e132. Epub 2014 Jul 29.

School of Life Sciences, Arizona State University, 427 E Tyler Mall, Tempe, AZ 85287, USA Virginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, 1001 S. McAllister Dr., Tempe, AZ 85287, USA Barrett, The Honors College, Arizona State University, 751 E Lemon Mall, Tempe, AZ 85287, USA

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February 2015

Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.

Authors:
Mark B Gerstein Zhi John Lu Eric L Van Nostrand Chao Cheng Bradley I Arshinoff Tao Liu Kevin Y Yip Rebecca Robilotto Andreas Rechtsteiner Kohta Ikegami Pedro Alves Aurelien Chateigner Marc Perry Mitzi Morris Raymond K Auerbach Xin Feng Jing Leng Anne Vielle Wei Niu Kahn Rhrissorrakrai Ashish Agarwal Roger P Alexander Galt Barber Cathleen M Brdlik Jennifer Brennan Jeremy Jean Brouillet Adrian Carr Ming-Sin Cheung Hiram Clawson Sergio Contrino Luke O Dannenberg Abby F Dernburg Arshad Desai Lindsay Dick Andréa C Dosé Jiang Du Thea Egelhofer Sevinc Ercan Ghia Euskirchen Brent Ewing Elise A Feingold Reto Gassmann Peter J Good Phil Green Francois Gullier Michelle Gutwein Mark S Guyer Lukas Habegger Ting Han Jorja G Henikoff Stefan R Henz Angie Hinrichs Heather Holster Tony Hyman A Leo Iniguez Judith Janette Morten Jensen Masaomi Kato W James Kent Ellen Kephart Vishal Khivansara Ekta Khurana John K Kim Paulina Kolasinska-Zwierz Eric C Lai Isabel Latorre Amber Leahey Suzanna Lewis Paul Lloyd Lucas Lochovsky Rebecca F Lowdon Yaniv Lubling Rachel Lyne Michael MacCoss Sebastian D Mackowiak Marco Mangone Sheldon McKay Desirea Mecenas Gennifer Merrihew David M Miller Andrew Muroyama John I Murray Siew-Loon Ooi Hoang Pham Taryn Phippen Elicia A Preston Nikolaus Rajewsky Gunnar Rätsch Heidi Rosenbaum Joel Rozowsky Kim Rutherford Peter Ruzanov Mihail Sarov Rajkumar Sasidharan Andrea Sboner Paul Scheid Eran Segal Hyunjin Shin Chong Shou Frank J Slack Cindie Slightam Richard Smith William C Spencer E O Stinson Scott Taing Teruaki Takasaki Dionne Vafeados Ksenia Voronina Guilin Wang Nicole L Washington Christina M Whittle Beijing Wu Koon-Kiu Yan Georg Zeller Zheng Zha Mei Zhong Xingliang Zhou Julie Ahringer Susan Strome Kristin C Gunsalus Gos Micklem X Shirley Liu Valerie Reinke Stuart K Kim LaDeana W Hillier Steven Henikoff Fabio Piano Michael Snyder Lincoln Stein Jason D Lieb Robert H Waterston

Science 2010 Dec 22;330(6012):1775-87. Epub 2010 Dec 22.

Program in Computational Biology and Bioinformatics, Yale University, Bass 432, 266 Whitney Avenue, New Haven, CT 06520, USA.

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December 2010

Role of the HCF-1 basic region in sustaining cell proliferation.

PLoS One 2010 Feb 2;5(2):e9020. Epub 2010 Feb 2.

Watson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.

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February 2010

UTRome.org: a platform for 3'UTR biology in C. elegans.

Nucleic Acids Res 2008 Jan 5;36(Database issue):D57-62. Epub 2007 Nov 5.

Department of Biology and Center for Genomics and Systems Biology, New York University, 100 Washington Square East, New York, NY 10003, USA.

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January 2008